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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, extracellular

Predictor Summary:
  • mitochondrion 2
  • extracellular 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion, plasma membrane
Any Predictor:extracellular, mitochondrion
iPSORT:mitochondrion
MultiLoc:extracellular
TargetP:mitochondrion
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU3Hr1G098530.4

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G05460.1 HORVU3Hr1G098530.4 AT4G02570.1 12795696
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G070700.2 Barley mitochondrion 56.86 42.93
HORVU6Hr1G014660.1 Barley cytosol 22.41 31.46
PGSC0003DMT400058969 Potato cytosol 9.03 30.34
Bra000817.1-P Field mustard plastid 17.06 28.33
HORVU2Hr1G020540.2 Barley cytosol 25.08 26.69
CDY21989 Canola cytosol 7.02 25.93
Solyc08g013780.1.1 Tomato cytosol 10.37 25.2
AT4G03630.1 Thale cress cytosol 18.39 25.0
Zm00001d046527_P001 Maize extracellular, mitochondrion, nucleus 17.06 22.97
CDX99649 Canola cytosol 17.39 22.32
HORVU1Hr1G004970.3 Barley cytosol 24.08 22.22
HORVU0Hr1G019800.1 Barley cytosol 22.74 21.94
Bra030342.1-P Field mustard cytosol 16.72 21.46
CDY15937 Canola cytosol 16.72 21.46
AT5G52480.1 Thale cress cytosol 16.72 20.75
HORVU5Hr1G020150.1 Barley mitochondrion 22.74 20.06
Bra000723.1-P Field mustard cytosol 10.03 19.74
CDX90789 Canola cytosol 19.73 19.6
HORVU2Hr1G027710.1 Barley cytosol 19.06 19.59
CDY48577 Canola cytosol 18.39 19.5
Bra034230.1-P Field mustard cytosol 17.06 19.39
Bra034229.1-P Field mustard cytosol 17.73 19.2
PGSC0003DMT400090939 Potato cytosol 19.4 19.14
CDY21983 Canola cytosol 18.06 19.08
Solyc08g006940.2.1 Tomato cytosol 19.73 18.97
PGSC0003DMT400052833 Potato cytosol 17.39 18.91
AT4G05490.1 Thale cress plastid 19.4 18.89
HORVU2Hr1G027770.2 Barley mitochondrion 19.06 18.87
Bra034226.1-P Field mustard cytosol 18.06 18.75
CDX73787 Canola cytosol 16.05 18.75
PGSC0003DMT400015035 Potato cytosol 19.06 18.63
PGSC0003DMT400016134 Potato cytosol 18.06 18.62
VIT_10s0003g04300.t01 Wine grape cytosol 19.73 18.38
CDX86473 Canola cytosol 15.72 18.36
AT4G05470.1 Thale cress cytosol, plastid 18.73 18.3
AT4G05497.1 Thale cress plastid 15.05 18.29
CDY48580 Canola cytosol 18.73 18.24
Bra034228.1-P Field mustard cytosol 18.06 18.18
CDY48576 Canola cytosol 18.06 18.18
Bra030690.1-P Field mustard cytosol 17.06 18.15
CDY15618 Canola cytosol 17.06 18.15
AT4G05475.1 Thale cress cytosol 18.73 18.12
CDY21333 Canola nucleus, plastid 17.73 18.03
Zm00001d046526_P001 Maize plastid 17.06 18.02
CDY21986 Canola cytosol, plastid 18.06 18.0
Bra000816.1-P Field mustard plastid 19.4 17.85
CDY48574 Canola cytosol 17.73 17.79
Bra034227.1-P Field mustard plastid 18.73 17.61
CDY48575 Canola plastid 18.39 17.35
Solyc08g013800.2.1 Tomato cytosol 17.06 17.35
CDY62000 Canola plastid 19.06 17.33
AT4G05460.1 Thale cress cytosol 17.39 17.22
CDY09910 Canola nucleus 18.39 17.19
Solyc08g006920.1.1 Tomato cytosol, mitochondrion, nucleus 17.39 17.16
CDY48578 Canola cytosol 14.05 16.73
PGSC0003DMT400015030 Potato cytosol 16.05 16.22
CDY59275 Canola plastid 17.39 16.2
CDY06267 Canola nucleus 18.73 16.09
KRH21099 Soybean cytosol 16.72 16.08
HORVU2Hr1G077990.2 Barley plastid 20.07 16.04
Bra031582.1-P Field mustard nucleus 18.73 16.0
CDY10283 Canola cytosol 16.72 15.92
KRH11147 Soybean cytosol 16.72 15.72
Solyc08g013820.2.1 Tomato cytosol 19.4 15.59
PGSC0003DMT400054358 Potato cytosol 16.39 14.45
CDY21988 Canola cytosol 7.02 13.91
Bra034231.1-P Field mustard cytosol, plastid 11.04 12.74
CDX77948 Canola cytosol 6.69 11.83
HORVU3Hr1G092720.1 Barley cytosol, mitochondrion, nucleus 18.73 11.81
CDY21990 Canola cytosol 6.69 10.42
Bra034194.1-P Field mustard cytosol 18.06 10.09
CDY09154 Canola plastid 17.73 9.35
Bra020205.1-P Field mustard plastid 17.73 9.35
CDY22112 Canola cytosol 14.38 8.92
HORVU2Hr1G020470.1 Barley mitochondrion 1.67 4.24
Protein Annotations
EnsemblPlants:HORVU6Hr1G070690.2EnsemblPlantsGene:HORVU6Hr1G070690Gene3D:3.80.10.10InterPro:IPR032675InterPro:LRR_dom_sfPANTHER:PTHR44078
PANTHER:PTHR44078:SF2SEG:segSUPFAM:SSF52047UniParc:UPI000B487CC3UniProt:A0A287ULI6MapMan:35.2
Description
No Description!
Coordinates
chrchr6H:-:492552531..492558719
Molecular Weight (calculated)
32838.8 Da
IEP (calculated)
7.686
GRAVY (calculated)
0.024
Length
299 amino acids
Sequence
(BLAST)
001: NNLLLFLADR APLLKSLHLT KSCNVTSKGL AEAIKKFPLL EEFELCECER YDTWVFEILA AACPRLKHFK HVNDRGYSWY NWERDLYPVD NREALAIAGM
101: HELRSLKLYH SGLDNQGLTA ILGGCPHLES LDIRYCSITM DSSMRAKCAR VKTKKVFPYA PTDDWVRSPS GVRDDFVDDS SKYFEPGSPV SRCHSPRDSM
201: ILPSISSLAA LLVDAILHGI VIGGVAAMAK SPTVGFSMWS LVTPMTLTIL SCLAMPRRPS LSTGGSEGLV YTTFGCSDGS APARPGHLLH CLISGASLL
Best Arabidopsis Sequence Match ( AT4G03630.1 )
(BLAST)
001: MNNEDFNADE LLTFVAYRSS ILKRLGRMMC HAVALSQGGC VEINIEHFGT DSLLTYIADR SSNLRHLGLA KCDQITGMGL FTEAMKLPLL EDLELSYCLI
101: KGKNLEAIGF ACLHLKTLKL NCQGFKFPGF TYDHDALGIA KRMPELRCLQ LFGNRVSDVG LNAIFDGCPH LEHLDLRQCF NINLVGDLEK RCMERIKDLR
201: RPNDSTADYP YDTSLLDLGI
Arabidopsis Description
Putative nodulin [Source:UniProtKB/TrEMBL;Acc:Q9SY41]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.