Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48575 | Canola | plastid | 95.91 | 96.21 |
| Bra034230.1-P | Field mustard | cytosol | 47.8 | 57.79 |
| Bra034231.1-P | Field mustard | cytosol, plastid | 45.91 | 56.37 |
| Bra034226.1-P | Field mustard | cytosol | 50.31 | 55.56 |
| Bra030690.1-P | Field mustard | cytosol | 49.06 | 55.52 |
| Bra000723.1-P | Field mustard | cytosol | 26.42 | 55.26 |
| Bra034229.1-P | Field mustard | cytosol | 47.48 | 54.71 |
| Bra000817.1-P | Field mustard | plastid | 30.82 | 54.44 |
| Bra000816.1-P | Field mustard | plastid | 54.4 | 53.23 |
| Bra030342.1-P | Field mustard | cytosol | 38.05 | 51.93 |
| Bra034228.1-P | Field mustard | cytosol | 48.11 | 51.52 |
| Bra031582.1-P | Field mustard | nucleus | 53.46 | 48.57 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 44.97 | 44.55 |
| KRH21099 | Soybean | cytosol | 43.08 | 44.05 |
| Solyc08g013800.2.1 | Tomato | cytosol | 39.94 | 43.2 |
| PGSC0003DMT400016134 | Potato | cytosol | 39.31 | 43.1 |
| Solyc08g013780.1.1 | Tomato | cytosol | 16.67 | 43.09 |
| PGSC0003DMT400058969 | Potato | cytosol | 11.95 | 42.7 |
| PGSC0003DMT400052833 | Potato | cytosol | 36.79 | 42.55 |
| Solyc08g006940.2.1 | Tomato | cytosol | 41.51 | 42.44 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 34.91 | 41.57 |
| KRH11147 | Soybean | cytosol | 40.57 | 40.57 |
| PGSC0003DMT400090939 | Potato | cytosol | 38.05 | 39.93 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 32.39 | 39.92 |
| PGSC0003DMT400015030 | Potato | cytosol | 37.11 | 39.86 |
| PGSC0003DMT400015035 | Potato | cytosol | 37.11 | 38.56 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 19.5 | 37.35 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 11.95 | 36.19 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 37.74 | 34.78 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 37.74 | 34.68 |
| PGSC0003DMT400054358 | Potato | cytosol | 36.79 | 34.51 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 22.01 | 34.48 |
| Zm00001d024252_P001 | Maize | cytosol | 28.62 | 34.47 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 37.42 | 34.39 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 10.69 | 34.34 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 33.02 | 34.31 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 31.76 | 34.24 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 33.02 | 34.09 |
| EES14679 | Sorghum | nucleus | 36.79 | 34.01 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 32.7 | 33.77 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 32.39 | 33.66 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 32.39 | 33.66 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 34.28 | 33.64 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 32.7 | 33.55 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 34.59 | 33.54 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 21.38 | 33.5 |
| KXG24675 | Sorghum | cytosol | 30.19 | 33.33 |
| Zm00001d010914_P001 | Maize | cytosol | 34.28 | 33.33 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 34.28 | 33.23 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 31.45 | 33.22 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 21.38 | 33.17 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 36.48 | 33.14 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 11.01 | 33.02 |
| Os02t0317300-01 | Rice | cytosol | 33.96 | 32.93 |
| EES17669 | Sorghum | cytosol | 34.28 | 32.83 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 34.91 | 32.74 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 29.87 | 32.65 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 32.39 | 32.59 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 35.85 | 32.57 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 35.85 | 32.57 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 17.61 | 32.56 |
| Os02t0317500-01 | Rice | cytosol | 33.65 | 32.42 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 29.56 | 32.3 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 20.44 | 32.18 |
| KXG24670 | Sorghum | cytosol | 32.08 | 32.18 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 33.33 | 32.12 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 20.44 | 32.02 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 17.3 | 31.98 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 34.28 | 31.96 |
| Os08t0194350-00 | Rice | cytosol | 26.73 | 31.95 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 30.82 | 31.72 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 29.87 | 31.46 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 22.96 | 31.33 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 31.76 | 31.27 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 20.44 | 31.25 |
| Solyc08g013820.2.1 | Tomato | cytosol | 36.48 | 31.18 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 33.02 | 30.97 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 33.65 | 30.92 |
| TraesCS2B01G178700.1 | Wheat | plastid | 29.87 | 30.74 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 31.13 | 30.56 |
| Os08t0193200-00 | Rice | cytosol | 11.01 | 30.43 |
| TraesCS2D01G159000.1 | Wheat | plastid | 29.56 | 30.42 |
| Os11t0637300-00 | Rice | cytosol | 11.32 | 30.0 |
| Zm00001d024265_P001 | Maize | cytosol | 28.3 | 30.0 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 29.87 | 29.69 |
| Os08t0193500-00 | Rice | cytosol | 20.44 | 29.68 |
| OQU80176 | Sorghum | mitochondrion | 20.75 | 29.6 |
| Bra034194.1-P | Field mustard | cytosol | 49.69 | 29.53 |
| Bra020205.1-P | Field mustard | plastid | 52.52 | 29.45 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 28.93 | 29.39 |
| Zm00001d046526_P001 | Maize | plastid | 26.1 | 29.33 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 29.87 | 29.32 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 28.62 | 29.26 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 28.62 | 29.07 |
| Zm00001d024764_P001 | Maize | cytosol | 32.39 | 28.85 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 19.81 | 28.12 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 19.81 | 28.12 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 10.38 | 27.97 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 19.5 | 27.93 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 27.67 | 27.67 |
| Os08t0193900-01 | Rice | nucleus | 34.28 | 27.53 |
| OQU80048 | Sorghum | cytosol | 24.53 | 27.37 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 29.87 | 27.3 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 27.36 | 27.1 |
| TraesCS6B01G067700.1 | Wheat | plastid | 22.64 | 26.87 |
| TraesCS7D01G203500.1 | Wheat | plastid | 28.62 | 26.76 |
| TraesCS7D01G203600.1 | Wheat | plastid | 28.62 | 26.69 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 27.67 | 26.67 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 28.62 | 26.45 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 16.04 | 26.42 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 28.93 | 26.29 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 28.3 | 26.16 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 28.93 | 26.06 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 28.93 | 25.99 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 27.36 | 25.97 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 22.64 | 25.62 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 26.42 | 24.63 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 33.33 | 24.54 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 16.35 | 24.41 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 35.53 | 24.04 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 10.69 | 23.94 |
| HORVU2Hr1G077990.2 | Barley | plastid | 27.99 | 23.8 |
| Os08t0193300-00 | Rice | cytosol | 24.84 | 23.72 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 24.84 | 22.9 |
| TraesCS6B01G310200.1 | Wheat | plastid | 25.79 | 22.71 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 30.82 | 22.37 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 31.13 | 22.25 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 16.98 | 22.22 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 21.07 | 22.11 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 20.75 | 21.85 |
| OQU80174 | Sorghum | cytosol | 9.12 | 21.64 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 16.98 | 21.6 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 32.08 | 21.56 |
| TraesCS6A01G051000.1 | Wheat | plastid | 25.16 | 21.51 |
| Os08t0191300-00 | Rice | cytosol, golgi | 17.3 | 21.4 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 31.76 | 21.31 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 26.1 | 20.96 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 30.82 | 20.94 |
| TraesCS3B01G452300.1 | Wheat | plastid | 30.5 | 20.86 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 17.61 | 20.74 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 24.84 | 20.2 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 30.19 | 19.35 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 17.61 | 18.73 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 21.07 | 18.06 |
| Os08t0196200-01 | Rice | cytosol | 11.32 | 13.14 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 0.94 | 0.79 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | MapMan:35.1 | EnsemblPlantsGene:Bra034227 | EnsemblPlants:Bra034227.1 | EnsemblPlants:Bra034227.1-P |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 |
| InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | UniProt:M4EZI4 | PFAM:PF12937 |
| PFAM:PF13516 | PFscan:PS50181 | PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 | SMART:SM00256 | SUPFAM:SSF52047 |
| SUPFAM:SSF81383 | UniParc:UPI00025439F4 | SEG:seg | : | : | : |
Description
AT4G05460 (E=3e-084) | F-box family protein (FBL20)
Coordinates
chrA01:-:26839708..26840904
Molecular Weight (calculated)
36389.1 Da
IEP (calculated)
4.618
GRAVY (calculated)
-0.507
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSFYSP TPSTSMPQLM KPEEPRNWAE LPPELISSIL LRLNSIQILE KAQKVCRSWR RICKDPSMWR RVDMYNDGDL GSMGYDLEIM CRHAVDRSQG
101: GLLEIDLWYF GTDELLNYIA DRSSNLKSLR LIMCYPIADE GFVEAVRKLP LLEYLEVTYG AMSGEALKVA GQSCPNLKKL RLNSETNHQF NDEELNDKKA
201: LGIAESMPEL RHLQLVGNTL TNRGLTAILD GCPHLEHLDL RKCFNVRLEG DLEKRCSERI RELRRPDDST ADHPYGFNIE DLLGPNNYYW DDLSAGYPYG
301: ANVYDLSDCS DDYSDEFY
101: GLLEIDLWYF GTDELLNYIA DRSSNLKSLR LIMCYPIADE GFVEAVRKLP LLEYLEVTYG AMSGEALKVA GQSCPNLKKL RLNSETNHQF NDEELNDKKA
201: LGIAESMPEL RHLQLVGNTL TNRGLTAILD GCPHLEHLDL RKCFNVRLEG DLEKRCSERI RELRRPDDST ADHPYGFNIE DLLGPNNYYW DDLSAGYPYG
301: ANVYDLSDCS DDYSDEFY
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.