Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15937 | Canola | cytosol | 94.42 | 94.42 |
| Bra034230.1-P | Field mustard | cytosol | 55.36 | 49.05 |
| AT4G05497.1 | Thale cress | plastid | 51.5 | 48.78 |
| Bra034229.1-P | Field mustard | cytosol | 51.07 | 43.12 |
| Bra034226.1-P | Field mustard | cytosol | 52.36 | 42.36 |
| AT4G05490.1 | Thale cress | plastid | 55.79 | 42.35 |
| Bra000817.1-P | Field mustard | plastid | 30.47 | 39.44 |
| Bra034228.1-P | Field mustard | cytosol | 49.79 | 39.06 |
| Bra034231.1-P | Field mustard | cytosol, plastid | 42.49 | 38.22 |
| Bra034227.1-P | Field mustard | plastid | 51.93 | 38.05 |
| Bra030690.1-P | Field mustard | cytosol | 45.49 | 37.72 |
| PGSC0003DMT400016134 | Potato | cytosol | 46.78 | 37.59 |
| Bra000816.1-P | Field mustard | plastid | 52.36 | 37.54 |
| Bra031582.1-P | Field mustard | nucleus | 55.79 | 37.14 |
| PGSC0003DMT400052833 | Potato | cytosol | 43.78 | 37.09 |
| PGSC0003DMT400058969 | Potato | cytosol | 13.3 | 34.83 |
| KRH21099 | Soybean | cytosol | 44.64 | 33.44 |
| PGSC0003DMT400090939 | Potato | cytosol | 42.49 | 32.67 |
| KRH11147 | Soybean | cytosol | 44.21 | 32.39 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 36.91 | 32.21 |
| Solyc08g006940.2.1 | Tomato | cytosol | 42.92 | 32.15 |
| Solyc08g013800.2.1 | Tomato | cytosol | 40.34 | 31.97 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 22.75 | 31.93 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 43.78 | 31.78 |
| PGSC0003DMT400015035 | Potato | cytosol | 41.2 | 31.37 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 14.16 | 31.13 |
| Bra000723.1-P | Field mustard | cytosol | 20.17 | 30.92 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 33.91 | 30.62 |
| PGSC0003DMT400015030 | Potato | cytosol | 38.2 | 30.07 |
| PGSC0003DMT400054358 | Potato | cytosol | 42.49 | 29.2 |
| Solyc08g013780.1.1 | Tomato | cytosol | 15.02 | 28.46 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 35.19 | 28.18 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 35.19 | 27.8 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 12.45 | 27.62 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 11.59 | 27.27 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 40.34 | 27.25 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 23.61 | 27.09 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 23.61 | 27.09 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 23.61 | 26.83 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 37.34 | 26.52 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 34.76 | 26.47 |
| Zm00001d010914_P001 | Maize | cytosol | 36.91 | 26.3 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 13.3 | 26.27 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 22.75 | 26.24 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 34.33 | 26.14 |
| Zm00001d024252_P001 | Maize | cytosol | 29.61 | 26.14 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 22.75 | 26.11 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 36.05 | 25.93 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 38.63 | 25.71 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 37.34 | 25.66 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 36.05 | 25.61 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 33.05 | 25.58 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 33.48 | 25.49 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 38.2 | 25.43 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 25.32 | 25.32 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 35.62 | 25.15 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 37.34 | 25.14 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 33.48 | 25.08 |
| EES17669 | Sorghum | cytosol | 35.62 | 25.0 |
| Os02t0317300-01 | Rice | cytosol | 35.19 | 25.0 |
| Solyc08g013820.2.1 | Tomato | cytosol | 39.91 | 25.0 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 33.05 | 25.0 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 33.48 | 24.92 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 33.48 | 24.92 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 37.34 | 24.86 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 30.9 | 24.74 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 32.62 | 24.68 |
| Zm00001d024265_P001 | Maize | cytosol | 31.76 | 24.67 |
| KXG24675 | Sorghum | cytosol | 30.47 | 24.65 |
| TraesCS6B01G067700.1 | Wheat | plastid | 28.33 | 24.63 |
| KXG24670 | Sorghum | cytosol | 33.48 | 24.61 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 21.89 | 24.52 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 33.91 | 24.38 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 36.05 | 24.28 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 32.19 | 24.27 |
| Os02t0317500-01 | Rice | cytosol | 34.33 | 24.24 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 32.19 | 24.19 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 35.19 | 24.19 |
| Os11t0637300-00 | Rice | cytosol | 12.45 | 24.17 |
| Os08t0194350-00 | Rice | cytosol | 27.47 | 24.06 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 32.62 | 24.05 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 35.62 | 23.99 |
| OQU80174 | Sorghum | cytosol | 13.73 | 23.88 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 30.9 | 23.84 |
| EES14679 | Sorghum | nucleus | 35.19 | 23.84 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 17.6 | 23.84 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 32.62 | 23.75 |
| TraesCS2B01G178700.1 | Wheat | plastid | 31.33 | 23.62 |
| Os08t0193200-00 | Rice | cytosol | 11.59 | 23.48 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 32.62 | 23.46 |
| Bra034194.1-P | Field mustard | cytosol | 53.65 | 23.36 |
| TraesCS2D01G159000.1 | Wheat | plastid | 30.9 | 23.3 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 17.17 | 23.26 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 32.19 | 23.22 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 33.48 | 22.87 |
| Os08t0193500-00 | Rice | cytosol | 21.46 | 22.83 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 21.89 | 22.77 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 21.46 | 22.52 |
| Bra020205.1-P | Field mustard | plastid | 54.51 | 22.4 |
| Zm00001d024764_P001 | Maize | cytosol | 33.91 | 22.13 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 13.3 | 21.83 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 33.05 | 21.81 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 30.04 | 21.81 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 32.62 | 21.71 |
| Zm00001d046526_P001 | Maize | plastid | 26.18 | 21.55 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 32.62 | 21.47 |
| TraesCS7D01G203500.1 | Wheat | plastid | 30.9 | 21.18 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 27.47 | 21.12 |
| OQU80176 | Sorghum | mitochondrion | 20.17 | 21.08 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 30.04 | 20.9 |
| TraesCS7D01G203600.1 | Wheat | plastid | 30.47 | 20.82 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 28.33 | 20.75 |
| Os08t0193900-01 | Rice | nucleus | 35.19 | 20.71 |
| HORVU2Hr1G077990.2 | Barley | plastid | 33.05 | 20.59 |
| OQU80048 | Sorghum | cytosol | 24.89 | 20.35 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 30.04 | 20.35 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 19.31 | 20.09 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 29.61 | 20.06 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 27.9 | 19.7 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 28.33 | 19.35 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 28.33 | 18.97 |
| Os08t0193300-00 | Rice | cytosol | 27.04 | 18.92 |
| TraesCS6B01G310200.1 | Wheat | plastid | 28.76 | 18.56 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 27.47 | 18.55 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 34.33 | 18.52 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 22.32 | 18.51 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 16.74 | 18.31 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 15.02 | 18.13 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 18.88 | 18.11 |
| TraesCS6A01G051000.1 | Wheat | plastid | 28.76 | 18.01 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 29.18 | 17.17 |
| Os08t0191300-00 | Rice | cytosol, golgi | 18.88 | 17.12 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 34.33 | 17.02 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 21.89 | 16.89 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 21.46 | 16.72 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 17.6 | 16.4 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 18.88 | 16.3 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 30.47 | 16.21 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 30.47 | 15.96 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 31.76 | 15.61 |
| TraesCS3B01G452300.1 | Wheat | plastid | 30.9 | 15.48 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 30.9 | 15.38 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 25.75 | 15.35 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 30.9 | 15.22 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 30.9 | 14.52 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 21.46 | 13.48 |
| Os08t0196200-01 | Rice | cytosol | 12.02 | 10.22 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 0.43 | 0.26 |
Protein Annotations
| EnsemblPlants:Bra030342.1 | EnsemblPlants:Bra030342.1-P | EnsemblPlantsGene:Bra030342 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 | PFAM:PF12937 | PFscan:PS50181 | SMART:SM00256 |
| SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI0002543A5A | UniProt:M4ENH2 | MapMan:35.1 | : |
Description
AT4G05460 (E=1e-060) | F-box family protein (FBL20)
Coordinates
chrA04:-:9010418..9011216
Molecular Weight (calculated)
26372.1 Da
IEP (calculated)
5.354
GRAVY (calculated)
-0.112
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDAKLINWA ELPSELIYSI LHRLSVPDRL GNARNVCRSW RRVCQDPLMW RKIEMSNMGE YKEAKDYYHA AEAMCRRAVD LSQGGLLEIN IEYVGTDSLL
101: AYLADRSSNL KQLVLTECNG ITDVGLLGAV MKLKLLEHLE LSYFYFMELD LESIGRSCPL LKTLKLNNVG CYYLEDESDD DALAIAKTMP GLHHLQLIGN
201: MLTDTGVNAI VENCPHLKSL DLRDCGYINL APR
101: AYLADRSSNL KQLVLTECNG ITDVGLLGAV MKLKLLEHLE LSYFYFMELD LESIGRSCPL LKTLKLNNVG CYYLEDESDD DALAIAKTMP GLHHLQLIGN
201: MLTDTGVNAI VENCPHLKSL DLRDCGYINL APR
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.