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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
iPSORT:plastid
MultiLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU3Hr1G098530.4

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G05460.1 HORVU3Hr1G098530.4 AT4G02570.1 12795696
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os08t0193900-01 Rice nucleus 58.01 41.16
CDY21989 Canola cytosol 11.74 40.74
Bra000817.1-P Field mustard plastid 21.71 33.89
EES14677 Sorghum cytosol, mitochondrion, nucleus, plastid 56.23 33.62
HORVU0Hr1G019800.1 Barley cytosol 35.59 32.26
PGSC0003DMT400058969 Potato cytosol 9.96 31.46
HORVU2Hr1G020470.1 Barley mitochondrion 12.46 29.66
HORVU2Hr1G077990.2 Barley plastid 39.15 29.41
HORVU6Hr1G014660.1 Barley cytosol 21.71 28.64
AT4G03630.1 Thale cress cytosol 22.42 28.64
HORVU1Hr1G004970.3 Barley cytosol 32.03 27.78
Bra000723.1-P Field mustard cytosol 14.59 26.97
Solyc08g013780.1.1 Tomato cytosol 11.74 26.83
HORVU2Hr1G027710.1 Barley cytosol 27.05 26.12
HORVU2Hr1G027770.2 Barley mitochondrion 27.05 25.17
HORVU6Hr1G070690.2 Barley extracellular, mitochondrion, plasma membrane 26.69 25.08
AT5G52480.1 Thale cress cytosol 21.35 24.9
HORVU5Hr1G020150.1 Barley mitochondrion 29.54 24.48
CDY48580 Canola cytosol 26.69 24.43
Bra034230.1-P Field mustard cytosol 22.78 24.33
Os08t0194350-00 Rice cytosol 22.78 24.06
CDY48578 Canola cytosol 21.35 23.9
KRH21099 Soybean cytosol 26.33 23.79
CDY48576 Canola cytosol 24.91 23.57
Bra034228.1-P Field mustard cytosol 24.91 23.57
Bra030690.1-P Field mustard cytosol 23.49 23.49
CDY15618 Canola cytosol 23.49 23.49
CDY59275 Canola plastid 26.69 23.36
Bra034226.1-P Field mustard cytosol 23.84 23.26
CDX99649 Canola cytosol 19.22 23.18
CDY48574 Canola cytosol 24.56 23.15
CDY62000 Canola plastid 27.05 23.1
CDX86473 Canola cytosol 21.0 23.05
KRH11147 Soybean cytosol 25.98 22.96
CDX90789 Canola cytosol 24.56 22.92
Bra034229.1-P Field mustard cytosol 22.42 22.83
CDY15937 Canola cytosol 18.86 22.75
VIT_10s0003g04300.t01 Wine grape cytosol 25.98 22.74
CDX73787 Canola cytosol 20.64 22.66
Bra034227.1-P Field mustard plastid 25.62 22.64
AT4G05460.1 Thale cress cytosol 24.2 22.52
HORVU6Hr1G070700.2 Barley mitochondrion 31.67 22.47
CDY48575 Canola plastid 25.27 22.4
CDY21986 Canola cytosol, plastid 23.84 22.33
Bra030342.1-P Field mustard cytosol 18.51 22.32
Solyc08g006940.2.1 Tomato cytosol 24.56 22.19
AT4G05490.1 Thale cress plastid 24.2 22.15
PGSC0003DMT400016134 Potato cytosol 22.78 22.07
CDY21983 Canola cytosol 22.06 21.91
AT4G05470.1 Thale cress cytosol, plastid 23.84 21.9
Bra000816.1-P Field mustard plastid 25.27 21.85
PGSC0003DMT400052833 Potato cytosol 21.35 21.82
CDY48577 Canola cytosol 21.71 21.63
PGSC0003DMT400090939 Potato cytosol 23.13 21.45
PGSC0003DMT400015035 Potato cytosol 23.13 21.24
CDY21333 Canola nucleus, plastid 22.06 21.09
AT4G05475.1 Thale cress cytosol 23.13 21.04
CDY10283 Canola cytosol 23.49 21.02
Bra034231.1-P Field mustard cytosol, plastid 18.86 20.46
Solyc08g013800.2.1 Tomato cytosol 21.0 20.07
CDY09910 Canola nucleus 22.42 19.69
CDY06267 Canola nucleus 23.49 18.97
Bra031582.1-P Field mustard nucleus 23.49 18.86
AT4G05497.1 Thale cress plastid 16.37 18.7
PGSC0003DMT400054358 Potato cytosol 22.06 18.29
PGSC0003DMT400015030 Potato cytosol 18.51 17.57
Solyc08g006920.1.1 Tomato cytosol, mitochondrion, nucleus 18.86 17.49
Solyc08g013820.2.1 Tomato cytosol 23.13 17.47
HORVU3Hr1G092720.1 Barley cytosol, mitochondrion, nucleus 27.05 16.03
CDX77948 Canola cytosol 8.9 14.79
CDY21988 Canola cytosol 7.83 14.57
Bra034194.1-P Field mustard cytosol 25.62 13.46
Bra020205.1-P Field mustard plastid 26.69 13.23
CDY09154 Canola plastid 26.69 13.23
CDY22112 Canola cytosol 18.86 11.0
CDY21990 Canola cytosol 7.12 10.42
Os08t0194000-00 Rice cytosol, vacuole 2.49 1.85
Protein Annotations
EnsemblPlants:HORVU2Hr1G020540.2EnsemblPlantsGene:HORVU2Hr1G020540Gene3D:3.80.10.10InterPro:IPR032675InterPro:LRR_dom_sfPANTHER:PTHR44078
PANTHER:PTHR44078:SF3SEG:segSUPFAM:SSF52047UniParc:UPI000B47D209UniProt:A0A287HAF6MapMan:35.1
Description
No Description!
Coordinates
chrchr2H:+:56076911..56080005
Molecular Weight (calculated)
31082.6 Da
IEP (calculated)
4.175
GRAVY (calculated)
-0.251
Length
281 amino acids
Sequence
(BLAST)
001: MQSLNPNPMA RPTPPPPSRP LAAVAADAAA RGQHXAGQCE AFWGEYAAHE GLILFLGDQA PSLKSLRLIS CYRVFIEELV EALNKFPLLE ELELSLCSNI
101: GGSHMFDVAK ACPQLRVFRM SELRFHNLQD DSDGEDADSE FRYNKNDDAK GIATMLQLRS LQLFANNFTN EGLTAILDNC VHLESLDIRH CFNVVMDDAL
201: RAKCSRIKTL RLPNDPTDDY DIEALSPIWS GIGMGVDTDS DGDCVYGGPD YILDSDEYDD YCDPERYLDG VYIVLASQAM T
Best Arabidopsis Sequence Match ( AT4G03630.1 )
(BLAST)
001: MNNEDFNADE LLTFVAYRSS ILKRLGRMMC HAVALSQGGC VEINIEHFGT DSLLTYIADR SSNLRHLGLA KCDQITGMGL FTEAMKLPLL EDLELSYCLI
101: KGKNLEAIGF ACLHLKTLKL NCQGFKFPGF TYDHDALGIA KRMPELRCLQ LFGNRVSDVG LNAIFDGCPH LEHLDLRQCF NINLVGDLEK RCMERIKDLR
201: RPNDSTADYP YDTSLLDLGI
Arabidopsis Description
Putative nodulin [Source:UniProtKB/TrEMBL;Acc:Q9SY41]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.