Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G05475.1 | Thale cress | cytosol | 73.53 | 72.82 |
| AT4G03630.1 | Thale cress | cytosol | 39.54 | 55.0 |
| AT4G05497.1 | Thale cress | plastid | 42.16 | 52.44 |
| AT5G52480.1 | Thale cress | cytosol | 36.6 | 46.47 |
| AT4G05490.1 | Thale cress | plastid | 45.42 | 45.28 |
| AT4G05460.1 | Thale cress | cytosol | 44.12 | 44.7 |
| PGSC0003DMT400058969 | Potato | cytosol | 11.76 | 40.45 |
| Solyc08g013780.1.1 | Tomato | cytosol | 16.01 | 39.84 |
| KRH21099 | Soybean | cytosol | 40.2 | 39.55 |
| KRH11147 | Soybean | cytosol | 39.22 | 37.74 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 39.22 | 37.38 |
| PGSC0003DMT400016134 | Potato | cytosol | 33.99 | 35.86 |
| PGSC0003DMT400015030 | Potato | cytosol | 34.64 | 35.81 |
| Solyc08g013800.2.1 | Tomato | cytosol | 34.31 | 35.71 |
| PGSC0003DMT400015035 | Potato | cytosol | 35.62 | 35.62 |
| PGSC0003DMT400052833 | Potato | cytosol | 31.7 | 35.27 |
| Solyc08g006940.2.1 | Tomato | cytosol | 34.64 | 34.08 |
| PGSC0003DMT400090939 | Potato | cytosol | 33.01 | 33.33 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 28.1 | 33.33 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 28.1 | 32.21 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 17.32 | 31.93 |
| PGSC0003DMT400054358 | Potato | cytosol | 35.29 | 31.86 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 20.59 | 31.03 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 20.59 | 31.03 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 29.74 | 30.85 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 20.26 | 30.69 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 20.26 | 30.54 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 30.39 | 30.39 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 20.26 | 30.24 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 28.76 | 30.24 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 30.07 | 30.07 |
| KXG24675 | Sorghum | cytosol | 28.1 | 29.86 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 16.67 | 29.65 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 16.34 | 29.07 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 31.05 | 28.96 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 28.43 | 28.9 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 29.09 | 28.9 |
| Zm00001d024252_P001 | Maize | cytosol | 24.84 | 28.79 |
| Solyc08g013820.2.1 | Tomato | cytosol | 34.97 | 28.76 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 28.76 | 28.76 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 28.76 | 28.39 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 30.39 | 28.35 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 32.03 | 28.32 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 26.8 | 28.18 |
| Zm00001d010914_P001 | Maize | cytosol | 30.07 | 28.13 |
| Os02t0317300-01 | Rice | cytosol | 30.07 | 28.05 |
| EES17669 | Sorghum | cytosol | 30.39 | 28.01 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 28.1 | 27.92 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 21.24 | 27.9 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 18.95 | 27.88 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 30.07 | 27.88 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 31.37 | 27.83 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 9.48 | 27.62 |
| Os02t0317500-01 | Rice | cytosol | 29.74 | 27.58 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 29.09 | 27.47 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 30.39 | 27.43 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 31.37 | 27.43 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 31.37 | 27.43 |
| Zm00001d024265_P001 | Maize | cytosol | 26.8 | 27.33 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 27.78 | 27.33 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 28.1 | 27.22 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 27.78 | 27.16 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 26.8 | 27.15 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 31.05 | 27.14 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 30.07 | 27.14 |
| Os08t0194350-00 | Rice | cytosol | 23.53 | 27.07 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 30.39 | 26.88 |
| TraesCS2D01G159000.1 | Wheat | plastid | 27.12 | 26.86 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 19.61 | 26.79 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 19.61 | 26.79 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 30.07 | 26.59 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 26.8 | 26.54 |
| TraesCS2B01G178700.1 | Wheat | plastid | 26.8 | 26.54 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 27.12 | 26.52 |
| KXG24670 | Sorghum | cytosol | 27.45 | 26.5 |
| OQU80176 | Sorghum | mitochondrion | 19.28 | 26.46 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 9.15 | 26.42 |
| EES14679 | Sorghum | nucleus | 29.41 | 26.16 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 18.95 | 26.13 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 29.09 | 26.1 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 27.12 | 25.7 |
| Zm00001d046526_P001 | Maize | plastid | 23.53 | 25.44 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 26.47 | 25.0 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 26.14 | 24.69 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 25.82 | 24.61 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 25.49 | 24.38 |
| Zm00001d024764_P001 | Maize | cytosol | 28.43 | 24.37 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 7.84 | 24.24 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 25.16 | 24.21 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 26.47 | 24.18 |
| Os11t0637300-00 | Rice | cytosol | 9.48 | 24.17 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 21.9 | 23.84 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 15.03 | 23.83 |
| Os08t0193200-00 | Rice | cytosol | 8.82 | 23.48 |
| TraesCS7D01G203600.1 | Wheat | plastid | 26.14 | 23.46 |
| TraesCS7D01G203500.1 | Wheat | plastid | 25.82 | 23.24 |
| Os08t0193900-01 | Rice | nucleus | 29.74 | 22.98 |
| Os08t0193500-00 | Rice | cytosol | 16.34 | 22.83 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 25.82 | 22.7 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 24.18 | 22.42 |
| TraesCS6B01G067700.1 | Wheat | plastid | 19.61 | 22.39 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 8.5 | 22.03 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 24.84 | 22.03 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 24.51 | 21.8 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 24.51 | 21.8 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 30.72 | 21.76 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 24.84 | 21.71 |
| HORVU2Hr1G077990.2 | Barley | plastid | 26.47 | 21.66 |
| TraesCS6B01G310200.1 | Wheat | plastid | 25.49 | 21.61 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 24.84 | 21.53 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 24.84 | 21.47 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 23.2 | 20.82 |
| OQU80048 | Sorghum | cytosol | 19.28 | 20.7 |
| OQU80174 | Sorghum | cytosol | 8.82 | 20.15 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 30.72 | 20.0 |
| Os08t0191300-00 | Rice | cytosol, golgi | 16.67 | 19.84 |
| Os08t0193300-00 | Rice | cytosol | 21.57 | 19.82 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 19.61 | 19.8 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 16.99 | 19.26 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 24.51 | 18.94 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 18.63 | 18.87 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 13.07 | 18.78 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 18.3 | 18.73 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 26.47 | 18.49 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 8.5 | 18.31 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 26.47 | 18.2 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 14.38 | 18.11 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 14.38 | 17.6 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 27.12 | 17.55 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 27.12 | 17.51 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 26.47 | 17.31 |
| TraesCS3B01G452300.1 | Wheat | plastid | 26.14 | 17.2 |
| TraesCS6A01G051000.1 | Wheat | plastid | 20.91 | 17.2 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 21.57 | 16.88 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 27.12 | 16.73 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 18.95 | 15.63 |
| Os08t0196200-01 | Rice | cytosol | 7.84 | 8.76 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 0.65 | 0.53 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:825897 | UniProt:A0A2H1ZEM3 | ProteinID:AEE82524.2 | ArrayExpress:AT4G05470 |
| EnsemblPlantsGene:AT4G05470 | RefSeq:AT4G05470 | TAIR:AT4G05470 | RefSeq:AT4G05470-TAIR-G | EnsemblPlants:AT4G05470.1 | TAIR:AT4G05470.1 |
| Unigene:At.54166 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | RefSeq:NP_001319875.1 | PFAM:PF12937 | PFscan:PS50181 |
| PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 | SMART:SM00256 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI0008487B71 |
| SEG:seg | : | : | : | : | : |
Description
RNI-like superfamily protein [Source:TAIR;Acc:AT4G05470]
Coordinates
chr4:-:2763211..2765351
Molecular Weight (calculated)
34655.3 Da
IEP (calculated)
7.406
GRAVY (calculated)
-0.229
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MTASSKMTSS TTLLSLFMKE DEEGRNKKTT TSTTLESLLM KERRNWVDLP PELTTSILLR LSLTDILDNA QKVCKEWRRI CKDPSMWRKI NTRDCLMYNF
101: DFVSMCRHIV DLSQGGLLEI NVDEHFLSDS LLSYITDRSR NLRSLGLGMC FPRVTKLGVV NAIAKIPLLE TLEVTHSCIK LDLKAIGHAC PQLKTLKLNS
201: LGRLWPASDK YDSNVLDDMG PLECDDDALA IAESMPKLHH LQLMANRLTN TGLNAILDGC PHLEHLDVRK CFRISLVGNL EKRCLEMIKE LRRPGDSTAD
301: YPYNGV
101: DFVSMCRHIV DLSQGGLLEI NVDEHFLSDS LLSYITDRSR NLRSLGLGMC FPRVTKLGVV NAIAKIPLLE TLEVTHSCIK LDLKAIGHAC PQLKTLKLNS
201: LGRLWPASDK YDSNVLDDMG PLECDDDALA IAESMPKLHH LQLMANRLTN TGLNAILDGC PHLEHLDVRK CFRISLVGNL EKRCLEMIKE LRRPGDSTAD
301: YPYNGV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.