Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc01g099290.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G05460.1 | Solyc01g099290.2.1 | AT4G02570.1 | 12795696 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400052833 | Potato | cytosol | 52.15 | 57.45 |
| Bra000817.1-P | Field mustard | plastid | 18.15 | 30.56 |
| Solyc08g013780.1.1 | Tomato | cytosol | 11.88 | 29.27 |
| CDY21989 | Canola | cytosol | 7.59 | 28.4 |
| Bra030342.1-P | Field mustard | cytosol | 21.12 | 27.47 |
| CDX99649 | Canola | cytosol | 21.12 | 27.47 |
| CDY15937 | Canola | cytosol | 21.12 | 27.47 |
| KRH21099 | Soybean | cytosol | 26.73 | 26.05 |
| KRH11147 | Soybean | cytosol | 26.07 | 24.84 |
| Solyc08g013800.2.1 | Tomato | cytosol | 23.76 | 24.49 |
| Bra034226.1-P | Field mustard | cytosol | 22.77 | 23.96 |
| Bra034230.1-P | Field mustard | cytosol | 20.79 | 23.95 |
| AT4G03630.1 | Thale cress | cytosol | 17.16 | 23.64 |
| Bra034229.1-P | Field mustard | cytosol | 21.12 | 23.19 |
| CDY48574 | Canola | cytosol | 22.77 | 23.15 |
| Solyc08g006940.2.1 | Tomato | cytosol | 23.76 | 23.15 |
| CDY48578 | Canola | cytosol | 19.14 | 23.11 |
| Bra030690.1-P | Field mustard | cytosol | 21.12 | 22.78 |
| CDY15618 | Canola | cytosol | 21.12 | 22.78 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 24.09 | 22.74 |
| CDX73787 | Canola | cytosol | 19.14 | 22.66 |
| CDX86473 | Canola | cytosol | 19.14 | 22.66 |
| CDY21333 | Canola | nucleus, plastid | 21.78 | 22.45 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 17.16 | 22.32 |
| Os02t0317300-01 | Rice | cytosol | 24.09 | 22.26 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 24.09 | 22.26 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 23.76 | 22.22 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 18.81 | 22.09 |
| CDY48577 | Canola | cytosol | 20.46 | 21.99 |
| OQU80176 | Sorghum | mitochondrion | 16.17 | 21.97 |
| AT4G05497.1 | Thale cress | plastid | 17.82 | 21.95 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 23.76 | 21.95 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 23.43 | 21.91 |
| CDY48576 | Canola | cytosol | 21.45 | 21.89 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 19.14 | 21.72 |
| Zm00001d010914_P001 | Maize | cytosol | 23.43 | 21.71 |
| CDY21986 | Canola | cytosol, plastid | 21.45 | 21.67 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 23.1 | 21.6 |
| CDX90789 | Canola | cytosol | 21.45 | 21.59 |
| Zm00001d024252_P001 | Maize | cytosol | 18.81 | 21.59 |
| AT5G52480.1 | Thale cress | cytosol | 17.16 | 21.58 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 22.77 | 21.56 |
| Bra034228.1-P | Field mustard | cytosol | 21.12 | 21.55 |
| Bra000816.1-P | Field mustard | plastid | 23.1 | 21.54 |
| EES17669 | Sorghum | cytosol | 23.43 | 21.39 |
| CDY62000 | Canola | plastid | 23.1 | 21.28 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 23.1 | 21.21 |
| AT4G05460.1 | Thale cress | cytosol | 21.12 | 21.19 |
| CDY48580 | Canola | cytosol | 21.45 | 21.17 |
| Bra034227.1-P | Field mustard | plastid | 22.11 | 21.07 |
| CDY10283 | Canola | cytosol | 21.78 | 21.02 |
| CDY59275 | Canola | plastid | 22.11 | 20.87 |
| CDY48575 | Canola | plastid | 21.78 | 20.82 |
| Bra000723.1-P | Field mustard | cytosol | 10.23 | 20.39 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 20.46 | 20.26 |
| AT4G05490.1 | Thale cress | plastid | 20.46 | 20.2 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 14.19 | 20.19 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 23.1 | 20.0 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 23.1 | 20.0 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 19.47 | 20.0 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 20.13 | 19.93 |
| CDY09910 | Canola | nucleus | 20.79 | 19.69 |
| AT4G05470.1 | Thale cress | cytosol, plastid | 19.8 | 19.61 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 22.44 | 19.43 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 12.87 | 19.31 |
| Bra031582.1-P | Field mustard | nucleus | 22.11 | 19.14 |
| AT4G05475.1 | Thale cress | cytosol | 19.47 | 19.09 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 19.47 | 18.97 |
| CDY06267 | Canola | nucleus | 21.78 | 18.97 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 18.15 | 18.9 |
| EES14679 | Sorghum | nucleus | 21.45 | 18.9 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 17.49 | 18.86 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 19.47 | 18.85 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 21.45 | 18.84 |
| Os08t0194350-00 | Rice | cytosol | 16.5 | 18.8 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 12.54 | 18.72 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 19.14 | 18.53 |
| Zm00001d024764_P001 | Maize | cytosol | 21.78 | 18.49 |
| KXG24675 | Sorghum | cytosol | 17.49 | 18.4 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 20.46 | 18.29 |
| Solyc08g013820.2.1 | Tomato | cytosol | 22.44 | 18.28 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 18.15 | 18.27 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 19.47 | 18.27 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 12.21 | 18.23 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 20.79 | 18.21 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 20.79 | 18.21 |
| Os02t0317500-01 | Rice | cytosol | 19.8 | 18.18 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 9.9 | 18.07 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 20.13 | 17.99 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 18.15 | 17.97 |
| OQU80048 | Sorghum | cytosol | 16.83 | 17.89 |
| CDY21988 | Canola | cytosol | 8.91 | 17.88 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 17.16 | 17.87 |
| CDX77948 | Canola | cytosol | 9.9 | 17.75 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 11.88 | 17.73 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 18.48 | 17.61 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 18.48 | 17.45 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 17.16 | 17.39 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 19.8 | 17.34 |
| CDY21983 | Canola | cytosol | 16.17 | 17.31 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 11.88 | 17.31 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 17.16 | 17.22 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 17.49 | 17.21 |
| TraesCS6B01G067700.1 | Wheat | plastid | 15.18 | 17.16 |
| Os08t0191300-00 | Rice | cytosol, golgi | 14.52 | 17.12 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 17.49 | 17.1 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 18.81 | 17.01 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 19.14 | 17.01 |
| Zm00001d024265_P001 | Maize | cytosol | 16.83 | 17.0 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 9.57 | 16.86 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 17.16 | 16.83 |
| KXG24670 | Sorghum | cytosol | 17.49 | 16.72 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 16.83 | 16.56 |
| TraesCS2B01G178700.1 | Wheat | plastid | 16.83 | 16.5 |
| TraesCS2D01G159000.1 | Wheat | plastid | 16.83 | 16.5 |
| Os08t0193900-01 | Rice | nucleus | 21.45 | 16.41 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 17.82 | 16.36 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 9.24 | 16.28 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 16.83 | 16.14 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 10.89 | 16.1 |
| TraesCS7D01G203600.1 | Wheat | plastid | 17.82 | 15.84 |
| Bra034231.1-P | Field mustard | cytosol, plastid | 13.53 | 15.83 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 18.15 | 15.8 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 11.55 | 15.77 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 12.54 | 15.64 |
| TraesCS6B01G310200.1 | Wheat | plastid | 18.48 | 15.51 |
| HORVU2Hr1G077990.2 | Barley | plastid | 18.81 | 15.24 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 11.22 | 15.18 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 17.16 | 15.12 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 5.28 | 15.09 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 16.83 | 14.96 |
| Zm00001d046526_P001 | Maize | plastid | 13.86 | 14.84 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 21.12 | 14.81 |
| TraesCS7D01G203500.1 | Wheat | plastid | 16.5 | 14.71 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 16.83 | 14.45 |
| Os08t0193300-00 | Rice | cytosol | 15.84 | 14.41 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 16.83 | 14.41 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 16.5 | 14.29 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 16.17 | 14.24 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 10.23 | 13.84 |
| CDY21990 | Canola | cytosol | 8.58 | 13.54 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 17.49 | 13.38 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 15.18 | 13.33 |
| Os08t0193500-00 | Rice | cytosol | 9.57 | 13.24 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 19.8 | 12.77 |
| Bra034194.1-P | Field mustard | cytosol | 22.11 | 12.52 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 7.92 | 12.44 |
| TraesCS6A01G051000.1 | Wheat | plastid | 15.18 | 12.37 |
| TraesCS3B01G452300.1 | Wheat | plastid | 18.81 | 12.26 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 18.81 | 12.05 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 18.48 | 11.97 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 11.88 | 11.92 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 4.62 | 11.86 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 18.48 | 11.81 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 17.16 | 11.69 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 16.83 | 11.64 |
| Bra020205.1-P | Field mustard | plastid | 21.78 | 11.64 |
| CDY09154 | Canola | plastid | 21.78 | 11.64 |
| Os08t0193200-00 | Rice | cytosol | 4.29 | 11.3 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 9.24 | 11.2 |
| CDY22112 | Canola | cytosol | 17.49 | 11.0 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 17.82 | 10.89 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 13.53 | 10.49 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 3.63 | 10.48 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 3.3 | 10.1 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 8.58 | 9.63 |
| Os11t0637300-00 | Rice | cytosol | 3.63 | 9.17 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 10.56 | 8.63 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 3.96 | 8.45 |
| OQU80174 | Sorghum | cytosol | 3.63 | 8.21 |
| Os08t0196200-01 | Rice | cytosol | 2.64 | 2.92 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 0.33 | 0.26 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 |
| InterPro:IPR032675 | UniProt:K4CII0 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF13516 |
| PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 | SMART:SM00367 | SUPFAM:SSF52047 | EnsemblPlantsGene:Solyc08g006920.1 | EnsemblPlants:Solyc08g006920.1.1 |
| UniParc:UPI000276C245 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:1492121..1494699
Molecular Weight (calculated)
33984.3 Da
IEP (calculated)
5.018
GRAVY (calculated)
-0.044
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MYISKCKTSP KLRRLSIAWC NSKLDPEDLT EVVKKLPMLE ELCLTYNGIT EEGIRALGRF CPLLKSFELN NIFCHMSLGK ERNVEALAIS KNLSVLRHLK
101: LICNSVTNEG LEAILDGCPK LESLDLRGCF RVSLDKILSG RISQQIKNVK YPLDSLVCES LIEAVQKLPL LEELSLIHTA ITIQGIEALG HCCPRLKSFE
201: FNKSLYMGSV DDSDNEDERN EEALAIAKNL PTLHHLHLIG LQAILDSCPL LVSLDLRLCK YVTSNEVFSS RISGKLPHES LEGLEFSFEA CWDEDLSDSM
301: TDD
101: LICNSVTNEG LEAILDGCPK LESLDLRGCF RVSLDKILSG RISQQIKNVK YPLDSLVCES LIEAVQKLPL LEELSLIHTA ITIQGIEALG HCCPRLKSFE
201: FNKSLYMGSV DDSDNEDERN EEALAIAKNL PTLHHLHLIG LQAILDSCPL LVSLDLRLCK YVTSNEVFSS RISGKLPHES LEGLEFSFEA CWDEDLSDSM
301: TDD
001: MNNEDFNADE LLTFVAYRSS ILKRLGRMMC HAVALSQGGC VEINIEHFGT DSLLTYIADR SSNLRHLGLA KCDQITGMGL FTEAMKLPLL EDLELSYCLI
101: KGKNLEAIGF ACLHLKTLKL NCQGFKFPGF TYDHDALGIA KRMPELRCLQ LFGNRVSDVG LNAIFDGCPH LEHLDLRQCF NINLVGDLEK RCMERIKDLR
201: RPNDSTADYP YDTSLLDLGI
101: KGKNLEAIGF ACLHLKTLKL NCQGFKFPGF TYDHDALGIA KRMPELRCLQ LFGNRVSDVG LNAIFDGCPH LEHLDLRQCF NINLVGDLEK RCMERIKDLR
201: RPNDSTADYP YDTSLLDLGI
Arabidopsis Description
Putative nodulin [Source:UniProtKB/TrEMBL;Acc:Q9SY41]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.