Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plasma membrane 1
- plastid 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020205.1-P | Field mustard | plastid | 100.0 | 100.0 |
| CDY59275 | Canola | plastid | 53.97 | 95.33 |
| CDY48574 | Canola | cytosol | 34.04 | 64.77 |
| CDY21988 | Canola | cytosol | 17.11 | 64.24 |
| CDY62000 | Canola | plastid | 36.16 | 62.31 |
| CDY21333 | Canola | nucleus, plastid | 32.1 | 61.9 |
| CDY48576 | Canola | cytosol | 32.28 | 61.62 |
| CDY48580 | Canola | cytosol | 33.33 | 61.56 |
| CDY48578 | Canola | cytosol | 27.16 | 61.35 |
| CDY09910 | Canola | nucleus | 34.04 | 60.31 |
| CDY21986 | Canola | cytosol, plastid | 31.57 | 59.67 |
| CDY21989 | Canola | cytosol | 8.11 | 56.79 |
| CDY15618 | Canola | cytosol | 28.04 | 56.58 |
| CDY10283 | Canola | cytosol | 31.04 | 56.05 |
| CDX73787 | Canola | cytosol | 25.22 | 55.86 |
| CDY48577 | Canola | cytosol | 27.69 | 55.67 |
| CDX77948 | Canola | cytosol | 16.58 | 55.62 |
| CDX86473 | Canola | cytosol | 24.87 | 55.08 |
| CDX90789 | Canola | cytosol | 29.1 | 54.82 |
| CDX99649 | Canola | cytosol | 22.22 | 54.08 |
| CDY06267 | Canola | nucleus | 33.16 | 54.02 |
| CDY15937 | Canola | cytosol | 22.05 | 53.65 |
| CDY21990 | Canola | cytosol | 18.17 | 53.65 |
| CDY48575 | Canola | plastid | 29.63 | 53.0 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 25.93 | 45.79 |
| KRH21099 | Soybean | cytosol | 24.87 | 45.34 |
| KRH11147 | Soybean | cytosol | 24.16 | 43.08 |
| Solyc08g013800.2.1 | Tomato | cytosol | 20.99 | 40.48 |
| PGSC0003DMT400058969 | Potato | cytosol | 6.35 | 40.45 |
| PGSC0003DMT400016134 | Potato | cytosol | 20.63 | 40.34 |
| PGSC0003DMT400052833 | Potato | cytosol | 18.52 | 38.18 |
| PGSC0003DMT400015030 | Potato | cytosol | 19.75 | 37.84 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 17.81 | 37.83 |
| PGSC0003DMT400015035 | Potato | cytosol | 20.11 | 37.25 |
| Solyc08g006940.2.1 | Tomato | cytosol | 20.28 | 36.98 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 16.75 | 36.82 |
| Solyc08g013780.1.1 | Tomato | cytosol | 7.94 | 36.59 |
| PGSC0003DMT400090939 | Potato | cytosol | 19.22 | 35.97 |
| Solyc08g013820.2.1 | Tomato | cytosol | 23.46 | 35.75 |
| CDY21983 | Canola | cytosol | 17.81 | 35.69 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 10.05 | 34.34 |
| PGSC0003DMT400054358 | Potato | cytosol | 20.46 | 34.22 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 20.63 | 33.91 |
| CDY22112 | Canola | cytosol | 28.4 | 33.4 |
| Zm00001d010914_P001 | Maize | cytosol | 19.05 | 33.03 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 16.75 | 32.65 |
| EES14679 | Sorghum | nucleus | 19.75 | 32.56 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 6.0 | 32.38 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 19.75 | 32.37 |
| Os02t0317300-01 | Rice | cytosol | 18.69 | 32.32 |
| EES17669 | Sorghum | cytosol | 18.87 | 32.23 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 16.75 | 32.2 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 19.58 | 32.08 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 17.28 | 32.03 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 11.46 | 32.02 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 19.75 | 32.0 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 19.05 | 31.86 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 19.58 | 31.71 |
| Zm00001d024252_P001 | Maize | cytosol | 14.64 | 31.44 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 19.4 | 31.43 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 16.93 | 31.37 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 17.99 | 31.1 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 17.99 | 31.1 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 16.75 | 31.05 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 11.11 | 31.03 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 12.7 | 30.9 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 17.64 | 30.86 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 16.75 | 30.84 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 9.35 | 30.81 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 10.93 | 30.69 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 16.58 | 30.52 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 16.58 | 30.32 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 17.64 | 30.3 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 5.29 | 30.3 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 15.52 | 30.24 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 9.17 | 30.23 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 18.34 | 30.06 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 10.76 | 30.05 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 17.11 | 29.94 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 16.4 | 29.9 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 15.87 | 29.9 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 10.93 | 29.81 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 16.58 | 29.75 |
| Os08t0194350-00 | Rice | cytosol | 13.93 | 29.7 |
| Os08t0193200-00 | Rice | cytosol | 6.0 | 29.57 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 16.05 | 29.45 |
| Os02t0317500-01 | Rice | cytosol | 17.11 | 29.39 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 16.23 | 29.39 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 15.52 | 29.14 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 16.05 | 29.07 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 16.4 | 29.06 |
| Zm00001d024265_P001 | Maize | cytosol | 15.34 | 29.0 |
| Zm00001d046526_P001 | Maize | plastid | 14.46 | 28.98 |
| KXG24675 | Sorghum | cytosol | 14.64 | 28.82 |
| TraesCS2B01G178700.1 | Wheat | plastid | 15.7 | 28.8 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 16.4 | 28.79 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 10.41 | 28.78 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 16.4 | 28.7 |
| TraesCS2D01G159000.1 | Wheat | plastid | 15.52 | 28.48 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 17.11 | 28.45 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 16.75 | 28.02 |
| KXG24670 | Sorghum | cytosol | 15.34 | 27.44 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 5.11 | 27.36 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 5.64 | 27.12 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 15.34 | 27.1 |
| OQU80048 | Sorghum | cytosol | 13.58 | 27.02 |
| Os08t0193500-00 | Rice | cytosol | 10.41 | 26.94 |
| OQU80176 | Sorghum | mitochondrion | 10.58 | 26.91 |
| Zm00001d024764_P001 | Maize | cytosol | 16.93 | 26.89 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 10.58 | 26.79 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 13.23 | 26.69 |
| Os11t0637300-00 | Rice | cytosol | 5.64 | 26.67 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 10.23 | 26.13 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 6.53 | 26.06 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 15.34 | 25.97 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 14.46 | 25.79 |
| Os08t0193900-01 | Rice | nucleus | 17.81 | 25.51 |
| TraesCS6B01G067700.1 | Wheat | plastid | 11.82 | 25.0 |
| TraesCS7D01G203600.1 | Wheat | plastid | 14.81 | 24.63 |
| OQU80174 | Sorghum | cytosol | 5.82 | 24.63 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 9.7 | 24.55 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 18.69 | 24.54 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 14.64 | 24.13 |
| TraesCS7D01G203500.1 | Wheat | plastid | 14.46 | 24.12 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 14.81 | 24.0 |
| HORVU2Hr1G077990.2 | Barley | plastid | 15.7 | 23.8 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 14.81 | 23.8 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 14.29 | 23.55 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 14.64 | 23.45 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 13.93 | 23.17 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 8.64 | 23.0 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 13.76 | 22.61 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 13.76 | 22.41 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 18.52 | 22.34 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 7.58 | 22.28 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 12.87 | 22.12 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 11.64 | 21.78 |
| TraesCS6B01G310200.1 | Wheat | plastid | 13.4 | 21.05 |
| Os08t0191300-00 | Rice | cytosol, golgi | 9.52 | 21.01 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 10.93 | 20.53 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 8.64 | 20.16 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 9.52 | 20.0 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 13.76 | 19.7 |
| TraesCS6A01G051000.1 | Wheat | plastid | 12.87 | 19.62 |
| Os08t0193300-00 | Rice | cytosol | 11.46 | 19.52 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 8.47 | 19.2 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 14.99 | 19.1 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 14.64 | 18.95 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 15.17 | 18.38 |
| TraesCS3B01G452300.1 | Wheat | plastid | 14.99 | 18.28 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 14.99 | 17.97 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 14.99 | 17.93 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 12.35 | 17.9 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 9.35 | 17.73 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 15.17 | 17.34 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 10.41 | 15.9 |
| Os08t0196200-01 | Rice | cytosol | 5.11 | 10.58 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 0.88 | 1.32 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A078F7Z4 | EnsemblPlants:CDY09154 | ProteinID:CDY09154 |
| ProteinID:CDY09154.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:FBD | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00001385001 | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_2 |
| PFAM:PF07723 | PFAM:PF08387 | PFAM:PF12937 | PFscan:PS50181 | PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 |
| SMART:SM00256 | SMART:SM00579 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI00025434AC | SEG:seg |
Description
BnaA02g05800DBnaA02g05800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7Z4]
Coordinates
chrLK031993:-:381425..384165
Molecular Weight (calculated)
64922.2 Da
IEP (calculated)
4.951
GRAVY (calculated)
-0.109
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSLVLS SPSLTPVIKD GEYKNWAELP SELTSSILQR LSLVEILENA QKVCTSWRRV CKDPSMWRKI VMHYLGNLWY DRDIMCRHVV DRSQGGLIEI
101: EIWYFCTDSL LNYVADSSSS LRSLTLALCS QITNKGLTEA LMKLPLLEEL DVSFITLSGD SLRVVGQSCP YLKTFKLNCV GDIRTANEGD DDALAIAETM
201: PGLHNLQLFG NKLTDAGLNA IIDHCLNLEH LDLRQCFNVN IVGDLEKRCS ERVKVLRRPN DSTHDYPYEE VLVFNMMRAS EDGFMPNVSY YRDFEGASDH
301: SDYDPYDVYD DPWDMWEGLW LLISELDLDS SEFPEYNAFA RFVDWFLQKS CLPKLKLKIL KRKNVKSRVT RWIDFVARRK LIKHVDVEYI YVSRKRLEVM
401: PASLYVCETL LYLRLNRILV GSFDSVSLPC LKTMRLEENI YDSDTGLKSL ISSCPVLEDL SIVRRLDDND LTHSKVDTLP IALSSVPPQC LLSSLEFVEI
501: KSRYEAEFGL MELANYFAEN SVILKKLVVC WKRSKLEEDT VLSDLALQWQ SSTCQIEVCG PLKRLAV
101: EIWYFCTDSL LNYVADSSSS LRSLTLALCS QITNKGLTEA LMKLPLLEEL DVSFITLSGD SLRVVGQSCP YLKTFKLNCV GDIRTANEGD DDALAIAETM
201: PGLHNLQLFG NKLTDAGLNA IIDHCLNLEH LDLRQCFNVN IVGDLEKRCS ERVKVLRRPN DSTHDYPYEE VLVFNMMRAS EDGFMPNVSY YRDFEGASDH
301: SDYDPYDVYD DPWDMWEGLW LLISELDLDS SEFPEYNAFA RFVDWFLQKS CLPKLKLKIL KRKNVKSRVT RWIDFVARRK LIKHVDVEYI YVSRKRLEVM
401: PASLYVCETL LYLRLNRILV GSFDSVSLPC LKTMRLEENI YDSDTGLKSL ISSCPVLEDL SIVRRLDDND LTHSKVDTLP IALSSVPPQC LLSSLEFVEI
501: KSRYEAEFGL MELANYFAEN SVILKKLVVC WKRSKLEEDT VLSDLALQWQ SSTCQIEVCG PLKRLAV
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.