Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73787 | Canola | cytosol | 89.35 | 58.98 |
| CDY21988 | Canola | cytosol | 50.89 | 56.95 |
| CDY21990 | Canola | cytosol | 44.38 | 39.06 |
| CDX99649 | Canola | cytosol | 48.52 | 35.19 |
| CDY15937 | Canola | cytosol | 46.75 | 33.91 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 20.71 | 33.33 |
| CDY48578 | Canola | cytosol | 47.93 | 32.27 |
| CDY48580 | Canola | cytosol | 57.4 | 31.6 |
| CDY48577 | Canola | cytosol | 51.48 | 30.85 |
| CDY48574 | Canola | cytosol | 53.85 | 30.54 |
| CDY15618 | Canola | cytosol | 50.3 | 30.25 |
| CDX90789 | Canola | cytosol | 53.85 | 30.23 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 29.59 | 30.12 |
| CDY59275 | Canola | plastid | 56.8 | 29.91 |
| Os08t0193200-00 | Rice | cytosol | 20.12 | 29.57 |
| CDY09910 | Canola | nucleus | 55.62 | 29.38 |
| CDY21333 | Canola | nucleus, plastid | 50.89 | 29.25 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 18.34 | 29.25 |
| CDY48575 | Canola | plastid | 53.25 | 28.39 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 16.57 | 28.28 |
| CDY62000 | Canola | plastid | 55.03 | 28.27 |
| CDY48576 | Canola | cytosol | 48.52 | 27.61 |
| CDY10283 | Canola | cytosol | 50.89 | 27.39 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 18.93 | 27.12 |
| CDY21986 | Canola | cytosol, plastid | 47.93 | 27.0 |
| CDX86473 | Canola | cytosol | 40.83 | 26.95 |
| CDY06267 | Canola | nucleus | 54.44 | 26.44 |
| AT4G03630.1 | Thale cress | cytosol | 34.32 | 26.36 |
| Os11t0637300-00 | Rice | cytosol | 18.34 | 25.83 |
| OQU80174 | Sorghum | cytosol | 18.93 | 23.88 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 28.4 | 23.65 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 28.4 | 23.41 |
| PGSC0003DMT400016134 | Potato | cytosol | 39.65 | 23.1 |
| PGSC0003DMT400052833 | Potato | cytosol | 37.28 | 22.91 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 27.22 | 22.77 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 43.2 | 22.74 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 18.93 | 22.54 |
| KRH21099 | Soybean | cytosol | 40.83 | 22.19 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 26.63 | 22.17 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 26.63 | 22.17 |
| AT5G52480.1 | Thale cress | cytosol | 31.36 | 21.99 |
| Os08t0193500-00 | Rice | cytosol | 28.4 | 21.92 |
| Solyc08g013800.2.1 | Tomato | cytosol | 37.87 | 21.77 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 26.63 | 21.63 |
| PGSC0003DMT400015035 | Potato | cytosol | 39.05 | 21.57 |
| KRH11147 | Soybean | cytosol | 39.65 | 21.07 |
| PGSC0003DMT400015030 | Potato | cytosol | 36.69 | 20.95 |
| KXG24675 | Sorghum | cytosol | 34.91 | 20.49 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 20.71 | 20.35 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 20.71 | 20.35 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 31.95 | 20.22 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 26.63 | 20.09 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 30.18 | 19.77 |
| Zm00001d024252_P001 | Maize | cytosol | 30.18 | 19.32 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 33.14 | 19.24 |
| PGSC0003DMT400054358 | Potato | cytosol | 38.46 | 19.17 |
| CDY22112 | Canola | cytosol | 53.85 | 18.88 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 34.32 | 18.77 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 24.85 | 18.75 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 33.14 | 18.54 |
| PGSC0003DMT400090939 | Potato | cytosol | 33.14 | 18.48 |
| Solyc08g006940.2.1 | Tomato | cytosol | 33.73 | 18.33 |
| TraesCS2B01G178700.1 | Wheat | plastid | 33.14 | 18.12 |
| TraesCS2D01G159000.1 | Wheat | plastid | 33.14 | 18.12 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 30.18 | 17.53 |
| Solyc08g013820.2.1 | Tomato | cytosol | 38.46 | 17.47 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 31.36 | 17.32 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 31.36 | 17.32 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 30.18 | 17.29 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 25.44 | 17.2 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 19.53 | 17.1 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 33.14 | 17.07 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 31.95 | 16.82 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 30.18 | 16.67 |
| CDY09154 | Canola | plastid | 55.62 | 16.58 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 34.32 | 16.57 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 30.18 | 16.56 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 33.73 | 16.52 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 30.18 | 16.4 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 31.95 | 16.36 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 31.36 | 16.36 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 33.73 | 16.29 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 28.99 | 16.23 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 31.36 | 16.16 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 31.95 | 16.12 |
| KXG24670 | Sorghum | cytosol | 30.18 | 16.09 |
| Os02t0317500-01 | Rice | cytosol | 31.36 | 16.06 |
| TraesCS6B01G067700.1 | Wheat | plastid | 25.44 | 16.04 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 33.14 | 16.0 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 29.59 | 15.97 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 29.59 | 15.97 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 31.95 | 15.93 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 32.54 | 15.9 |
| Os02t0317300-01 | Rice | cytosol | 30.77 | 15.85 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 29.59 | 15.82 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 30.18 | 15.74 |
| EES14679 | Sorghum | nucleus | 31.95 | 15.7 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 31.36 | 15.63 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 31.95 | 15.61 |
| Zm00001d010914_P001 | Maize | cytosol | 30.18 | 15.6 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 28.4 | 15.58 |
| Os08t0194350-00 | Rice | cytosol | 24.26 | 15.41 |
| Zm00001d024265_P001 | Maize | cytosol | 27.22 | 15.33 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 27.22 | 15.28 |
| Zm00001d046526_P001 | Maize | plastid | 25.44 | 15.19 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 30.77 | 15.03 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 27.22 | 14.84 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 27.81 | 14.51 |
| EES17669 | Sorghum | cytosol | 28.4 | 14.46 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 27.22 | 14.38 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 26.63 | 14.15 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 27.81 | 13.78 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 27.81 | 13.66 |
| TraesCS7D01G203600.1 | Wheat | plastid | 27.22 | 13.49 |
| Os08t0193900-01 | Rice | nucleus | 31.36 | 13.38 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 27.22 | 13.37 |
| HORVU2Hr1G077990.2 | Barley | plastid | 29.59 | 13.37 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 27.81 | 13.31 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 24.85 | 13.0 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 33.14 | 12.96 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 26.63 | 12.86 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 24.85 | 12.73 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 26.63 | 12.71 |
| TraesCS7D01G203500.1 | Wheat | plastid | 25.44 | 12.65 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 26.04 | 12.64 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 16.57 | 12.61 |
| Zm00001d024764_P001 | Maize | cytosol | 26.63 | 12.61 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 28.99 | 12.53 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 25.44 | 12.46 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 17.16 | 12.45 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 24.85 | 12.32 |
| TraesCS6A01G051000.1 | Wheat | plastid | 26.63 | 12.1 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 26.04 | 11.86 |
| TraesCS6B01G310200.1 | Wheat | plastid | 24.26 | 11.36 |
| OQU80048 | Sorghum | cytosol | 18.93 | 11.23 |
| Os08t0193300-00 | Rice | cytosol | 21.89 | 11.11 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 28.4 | 10.96 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 28.4 | 10.79 |
| TraesCS3B01G452300.1 | Wheat | plastid | 29.59 | 10.75 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 17.16 | 10.74 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 29.59 | 10.68 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 29.59 | 10.64 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 29.59 | 10.57 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 29.59 | 10.55 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 24.26 | 10.35 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 14.79 | 10.29 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 17.75 | 9.9 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 28.99 | 9.88 |
| Os08t0196200-01 | Rice | cytosol | 15.98 | 9.85 |
| Os08t0191300-00 | Rice | cytosol, golgi | 14.2 | 9.34 |
| OQU80176 | Sorghum | mitochondrion | 11.83 | 8.97 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 14.79 | 8.9 |
| CDY21983 | Canola | cytosol | 13.61 | 8.13 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 10.06 | 7.98 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 11.83 | 6.69 |
| PGSC0003DMT400058969 | Potato | cytosol | 2.96 | 5.62 |
| CDY21989 | Canola | cytosol | 1.18 | 2.47 |
| Solyc08g013780.1.1 | Tomato | cytosol | 1.78 | 2.44 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 0.59 | 0.26 |
Protein Annotations
| EnsemblPlants:CDX77948 | EnsemblPlantsGene:GSBRNA2T00129209001 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 | PFAM:PF12937 | PFscan:PS50181 | ProteinID:CDX77948 | ProteinID:CDX77948.1 |
| SMART:SM00256 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI0004EE58D6 | MapMan:35.1 | : |
Description
BnaA09g31430D
Coordinates
chrLK031814:-:224818..226011
Molecular Weight (calculated)
19423.4 Da
IEP (calculated)
7.425
GRAVY (calculated)
-0.375
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKDGRYRDW AGLPPELTWS ILSRLGTVDI LEKAQKVCKS WHSVCEEPSM WRKINMHNDL GFMDSLTRSR HVAMCRNAVD RSQGGLVEID IWYFCTDSLL
101: NHIADSSRNL RTLRIAMCHE INDGLLQAAG KLPFLEELDI SYCSFEEEIL KAINPNLNKK KRTINPNLS
101: NHIADSSRNL RTLRIAMCHE INDGLLQAAG KLPFLEELDI SYCSFEEEIL KAINPNLNKK KRTINPNLS
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.