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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000723.1-P Field mustard cytosol 49.17 97.37
CDY21988 Canola cytosol 33.22 66.23
CDY48578 Canola cytosol 48.84 58.57
CDY48574 Canola cytosol 57.81 58.39
CDY21333 Canola nucleus, plastid 56.81 58.16
CDY48575 Canola plastid 60.13 57.1
CDX99649 Canola cytosol 44.19 57.08
CDY48580 Canola cytosol 58.14 57.0
CDY09910 Canola nucleus 59.47 55.94
CDY15937 Canola cytosol 43.19 55.79
CDX73787 Canola cytosol 46.51 54.69
CDY15618 Canola cytosol 50.5 54.09
CDX77948 Canola cytosol 30.23 53.85
CDX86473 Canola cytosol 45.18 53.12
CDY48577 Canola cytosol 49.5 52.84
CDY59275 Canola plastid 55.81 52.34
CDY48576 Canola cytosol 51.16 51.85
CDY62000 Canola plastid 56.15 51.37
CDY06267 Canola nucleus 58.14 50.29
CDY21986 Canola cytosol, plastid 49.17 49.33
CDY10283 Canola cytosol 50.17 48.09
CDY21990 Canola cytosol 30.56 47.92
CDY21989 Canola cytosol 12.62 46.91
KRH21099 Soybean cytosol 45.85 44.37
VIT_10s0003g04300.t01 Wine grape cytosol 46.51 43.61
PGSC0003DMT400016134 Potato cytosol 41.86 43.45
KRH11147 Soybean cytosol 43.85 41.51
Solyc08g013800.2.1 Tomato cytosol 40.2 41.16
PGSC0003DMT400058969 Potato cytosol 11.96 40.45
PGSC0003DMT400015030 Potato cytosol 39.53 40.2
Solyc08g006940.2.1 Tomato cytosol 41.53 40.19
PGSC0003DMT400052833 Potato cytosol 36.54 40.0
Solyc08g013780.1.1 Tomato cytosol 16.28 39.84
PGSC0003DMT400090939 Potato cytosol 39.53 39.27
PGSC0003DMT400015035 Potato cytosol 39.87 39.22
TraesCS7A01G304900.1 Wheat mitochondrion, nucleus 32.56 36.7
PGSC0003DMT400054358 Potato cytosol 39.87 35.4
TraesCS3B01G443100.1 Wheat cytosol 30.23 35.27
TraesCS5B01G466500.1 Wheat extracellular 12.29 35.24
TraesCS5B01G081700.1 Wheat cytosol 18.94 34.34
CDY21983 Canola cytosol 32.23 34.28
TraesCS1D01G034100.1 Wheat cytosol 36.21 33.23
Zm00001d024252_P001 Maize cytosol 28.9 32.95
TraesCS1A01G033100.1 Wheat cytosol 35.55 32.62
TraesCS5D01G484300.1 Wheat cytosol 21.93 32.51
HORVU1Hr1G004970.3 Barley cytosol 34.88 32.41
TraesCS1B01G041200.1 Wheat cytosol 35.22 32.12
Zm00001d010914_P001 Maize cytosol 34.88 32.11
TraesCS5D01G088900.1 Wheat cytosol 32.56 32.03
TraesCS5A01G471800.1 Wheat cytosol 21.59 32.02
TraesCS5D01G100900.1 Wheat endoplasmic reticulum 18.27 31.98
TraesCS1D01G126200.1 Wheat nucleus 30.9 31.96
TraesCS3B01G443800.1 Wheat nucleus 36.54 31.88
TraesCS5A01G075400.1 Wheat cytosol 32.23 31.7
KXG24675 Sorghum cytosol 30.23 31.6
Solyc08g013820.2.1 Tomato cytosol 38.87 31.45
Os02t0317300-01 Rice cytosol 34.22 31.4
TraesCS5B01G094800.1 Wheat endoplasmic reticulum 17.94 31.4
TraesCS1A01G128000.1 Wheat cytosol 24.25 31.33
TraesCS5D01G468200.1 Wheat cytosol, plasma membrane, plastid 20.93 31.19
EES14679 Sorghum nucleus 35.55 31.1
TraesCS5B01G484300.1 Wheat cytosol 20.93 31.03
TraesCS2D01G070200.1 Wheat cytosol 33.22 30.86
TraesCS4B01G183700.1 Wheat cytosol 30.23 30.85
EES17669 Sorghum cytosol 33.89 30.72
TraesCS7B01G205200.1 Wheat mitochondrion 35.22 30.64
TraesCS7D01G300400.1 Wheat mitochondrion, nucleus 35.22 30.64
TraesCS2B01G085400.1 Wheat cytosol 32.23 30.31
TraesCS2B01G085200.1 Wheat cytosol 32.56 30.25
TraesCS2A01G071400.1 Wheat cytosol 10.63 30.19
TraesCS4B01G183800.1 Wheat cytosol 30.56 30.07
TraesCS3A01G410700.1 Wheat mitochondrion 34.88 30.0
HORVU2Hr1G027710.1 Barley cytosol 28.9 29.9
TraesCS7A01G193100.1 Wheat cytosol 30.56 29.87
TraesCS7B01G098400.1 Wheat cytosol 30.56 29.87
Os02t0317500-01 Rice cytosol 32.56 29.7
CDY22112 Canola cytosol 47.51 29.67
TraesCS3B01G444000.1 Wheat nucleus 34.22 29.43
TraesCS7B01G287400.1 Wheat cytosol 31.56 29.41
HORVU0Hr1G019800.1 Barley cytosol 30.23 29.35
Zm00001d024265_P001 Maize cytosol 29.24 29.33
Os08t0194350-00 Rice cytosol 25.91 29.32
TraesCS5B01G484500.1 Wheat cytosol 19.93 29.27
HORVU5Hr1G020150.1 Barley mitochondrion 32.89 29.2
TraesCS3D01G405300.1 Wheat nucleus 33.89 29.14
CDY09154 Canola plastid 54.82 29.1
TraesCS7D01G381100.1 Wheat mitochondrion 32.89 29.03
KXG24670 Sorghum cytosol 30.56 29.02
HORVU2Hr1G027770.2 Barley mitochondrion 28.9 28.81
TraesCS2A01G153600.1 Wheat cytosol, plastid 29.57 28.8
TraesCS7D01G194400.1 Wheat extracellular 30.23 28.8
OQU80048 Sorghum cytosol 27.24 28.77
TraesCS3A01G411000.1 Wheat nucleus 32.23 28.61
Os08t0195800-00 Rice cytosol, mitochondrion, nucleus 32.89 28.61
TraesCS7D01G194300.1 Wheat cytosol 28.57 28.57
TraesCS2D01G159000.1 Wheat plastid 29.24 28.48
TraesCS5B01G484600.1 Wheat cytosol 19.6 28.37
TraesCS7A01G484100.1 Wheat cytosol 9.3 28.28
TraesCS2B01G178700.1 Wheat plastid 28.9 28.16
TraesCS5B01G484100.1 Wheat cytosol 20.93 28.12
Zm00001d024764_P001 Maize cytosol 33.22 28.01
OQU80176 Sorghum mitochondrion 20.6 27.8
TraesCS2A01G313400.1 Wheat cytosol 28.24 27.33
Os08t0193200-00 Rice cytosol 10.3 26.96
TraesCS2B01G332200.1 Wheat cytosol 27.91 26.84
Os11t0637300-00 Rice cytosol 10.63 26.67
Zm00001d046527_P001 Maize extracellular, mitochondrion, nucleus 19.6 26.58
TraesCS2D01G311900.1 Wheat cytosol 27.57 26.52
Os08t0193500-00 Rice cytosol 19.27 26.48
TraesCS7B01G480000.1 Wheat cytosol 27.91 26.17
Zm00001d046526_P001 Maize plastid 24.58 26.15
TraesCS2D01G011000.1 Wheat cytosol 27.57 26.1
TraesCS2B01G385500.1 Wheat cytosol, plasma membrane, plastid 19.27 25.89
TraesCS5B01G284300.1 Wheat cytosol 29.24 25.58
TraesCS5D01G292400.1 Wheat cytosol 28.9 25.29
Os08t0193900-01 Rice nucleus 33.22 25.25
TraesCS6B01G067700.1 Wheat plastid 22.26 25.0
TraesCS7D01G555100.1 Wheat cytosol 27.57 24.78
HORVU2Hr1G020470.1 Barley mitochondrion 9.63 24.58
HORVU2Hr1G020540.2 Barley cytosol 22.92 24.56
TraesCS7D01G203500.1 Wheat plastid 27.57 24.41
TraesCS7D01G203600.1 Wheat plastid 27.57 24.34
TraesCS3B01G452600.1 Wheat extracellular 26.58 24.24
TraesCS3D01G413100.1 Wheat cytosol, endoplasmic reticulum, vacuole 27.91 24.14
TraesCS5B01G484200.1 Wheat cytosol, peroxisome, plastid 15.28 23.83
TraesCS6B01G310200.1 Wheat plastid 28.57 23.82
TraesCS4D01G274100.1 Wheat cytosol 10.96 23.24
TraesCS2A01G119000.1 Wheat nucleus 32.89 22.92
TraesCS6B01G067500.1 Wheat cytosol, extracellular 18.27 22.63
OQU80174 Sorghum cytosol 9.97 22.39
TraesCS6A01G089600.1 Wheat cytosol, mitochondrion 25.25 22.29
TraesCS6B01G112100.1 Wheat mitochondrion 25.91 22.29
TraesCS6A01G090000.1 Wheat mitochondrion 25.91 22.1
TraesCSU01G016500.1 Wheat mitochondrion 25.91 22.03
HORVU2Hr1G077990.2 Barley plastid 27.24 21.93
EES14677 Sorghum cytosol, mitochondrion, nucleus, plastid 33.89 21.7
HORVU6Hr1G014660.1 Barley cytosol 15.28 21.6
HORVU6Hr1G070700.2 Barley mitochondrion 28.24 21.46
Solyc08g006920.1.1 Tomato cytosol, mitochondrion, nucleus 21.59 21.45
TraesCS6B01G112000.1 Wheat mitochondrion 24.25 21.16
Os08t0193300-00 Rice cytosol 22.92 20.72
Os08t0191300-00 Rice cytosol, golgi 17.28 20.23
TraesCS3B01G452400.1 Wheat cytosol 29.57 20.0
TraesCS3D01G413000.1 Wheat cytosol 28.9 19.86
HORVU6Hr1G070690.2 Barley extracellular, mitochondrion, plasma membrane 19.6 19.73
Os08t0195000-00 Rice cytosol, peroxisome, plastid 16.28 19.6
Os08t0195900-00 Rice cytosol, mitochondrion, nucleus, plastid 19.6 19.54
HORVU3Hr1G092720.1 Barley cytosol, mitochondrion, nucleus 30.56 19.41
TraesCS3B01G452500.1 Wheat cytosol 30.23 19.24
TraesCS3A01G417500.1 Wheat cytosol 24.92 19.18
TraesCS3B01G452300.1 Wheat plastid 29.57 19.14
TraesCS6A01G051000.1 Wheat plastid 23.59 19.09
TraesCS3D01G412900.1 Wheat cytosol, plastid 29.57 19.02
TraesCSU01G016600.1 Wheat mitochondrion 16.94 18.89
TraesCS3A01G417400.1 Wheat cytosol 29.57 17.94
TraesCS5D01G484100.1 Wheat cytosol 21.26 17.25
Os08t0196200-01 Rice cytosol 9.97 10.95
Os08t0194000-00 Rice cytosol, vacuole 1.33 1.06
Protein Annotations
EnsemblPlants:CDX90789EnsemblPlantsGene:GSBRNA2T00151488001Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:F-box-like_dom_sfInterPro:F-box_domInterPro:IPR001810InterPro:IPR032675InterPro:LRR_dom_sfPANTHER:PTHR44078
PANTHER:PTHR44078:SF5PFAM:PF12937PFscan:PS50181ProteinID:CDX90789ProteinID:CDX90789.1SEG:seg
SMART:SM00256SUPFAM:SSF52047SUPFAM:SSF81383UniParc:UPI0004EE8450MapMan:35.1:
Description
BnaA03g24690D
Coordinates
chrLK031864:+:530122..531250
Molecular Weight (calculated)
34611.6 Da
IEP (calculated)
4.169
GRAVY (calculated)
-0.543
Length
301 amino acids
Sequence
(BLAST)
001: MPPVMKRGRH GNWADLPPEL MSSILLRIGA IDILENAQRV CRSWRRVCKD PSMWSKIDML NDGDLEDMDY DLEIMCRHAV DRSQGGLVEI DIGYFGTDDL
101: LNYIAVRSSN LRSLRLLMCD TLTDEGFMEA VVKLPLLEHL EVSYCSLSEE DFLKAAGQSC PNLKTLKLNS EPQFKRDDDE ALAIAETMPG LRHLQLYGNG
201: LTNKGLNAIL DACPHLLHLD LRKCFRVHFD GDMAKRCFER VKELRQPYDP TDDYPFDGFE RTIEEEATED EEEEEEDYSY DSDEYVYDVD NCSDTYDSCD
301: D
Best Arabidopsis Sequence Match ( AT4G05460.1 )
(BLAST)
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.