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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21989 Canola cytosol 30.68 95.06
Bra034230.1-P Field mustard cytosol 89.64 85.55
CDY21988 Canola cytosol 46.22 76.82
CDY48574 Canola cytosol 70.92 59.73
CDY48580 Canola cytosol 66.14 54.07
CDY48577 Canola cytosol 58.96 52.48
CDY15937 Canola cytosol 46.61 50.21
CDY48576 Canola cytosol 59.36 50.17
CDX73787 Canola cytosol 51.0 50.0
CDY21333 Canola nucleus, plastid 58.57 50.0
CDX99649 Canola cytosol 46.22 49.79
CDY59275 Canola plastid 62.95 49.22
CDY21986 Canola cytosol, plastid 58.57 49.0
CDX90789 Canola cytosol 58.57 48.84
CDX77948 Canola cytosol 32.27 47.93
CDY09910 Canola nucleus 60.56 47.5
CDY62000 Canola plastid 62.15 47.42
CDY21990 Canola cytosol 36.26 47.4
CDY15618 Canola cytosol 52.99 47.33
CDX86473 Canola cytosol 47.01 46.09
CDY10283 Canola cytosol 57.37 45.86
CDY48575 Canola plastid 56.97 45.11
CDY06267 Canola nucleus 61.35 44.25
PGSC0003DMT400058969 Potato cytosol 15.14 42.7
PGSC0003DMT400016134 Potato cytosol 43.43 37.59
VIT_10s0003g04300.t01 Wine grape cytosol 47.81 37.38
KRH21099 Soybean cytosol 45.42 36.66
PGSC0003DMT400052833 Potato cytosol 39.84 36.36
TraesCS5B01G466500.1 Wheat extracellular 15.14 36.19
KRH11147 Soybean cytosol 45.82 36.16
Solyc08g013800.2.1 Tomato cytosol 42.23 36.05
Solyc08g013780.1.1 Tomato cytosol 17.53 35.77
PGSC0003DMT400015030 Potato cytosol 41.43 35.14
PGSC0003DMT400015035 Potato cytosol 42.23 34.64
TraesCS3B01G443100.1 Wheat cytosol 35.46 34.5
Solyc08g006940.2.1 Tomato cytosol 42.63 34.41
TraesCS7A01G304900.1 Wheat mitochondrion, nucleus 35.46 33.33
PGSC0003DMT400090939 Potato cytosol 39.44 32.67
PGSC0003DMT400054358 Potato cytosol 42.63 31.56
TraesCS5B01G081700.1 Wheat cytosol 19.92 30.12
TraesCS5D01G484300.1 Wheat cytosol 24.3 30.05
TraesCS5A01G471800.1 Wheat cytosol 23.9 29.56
Zm00001d024252_P001 Maize cytosol 31.08 29.55
TraesCS5B01G484500.1 Wheat cytosol 23.9 29.27
TraesCS2A01G071400.1 Wheat cytosol 12.35 29.25
TraesCS5D01G468200.1 Wheat cytosol, plasma membrane, plastid 23.51 29.21
TraesCS5D01G100900.1 Wheat endoplasmic reticulum 19.92 29.07
TraesCS1D01G034100.1 Wheat cytosol 37.85 28.96
TraesCS1A01G033100.1 Wheat cytosol 37.45 28.66
CDY21983 Canola cytosol 32.27 28.62
TraesCS5B01G484300.1 Wheat cytosol 23.11 28.57
TraesCS5B01G094800.1 Wheat endoplasmic reticulum 19.52 28.49
TraesCS1B01G041200.1 Wheat cytosol 37.45 28.48
TraesCS4B01G183700.1 Wheat cytosol 33.47 28.47
KXG24675 Sorghum cytosol 32.67 28.47
TraesCS2A01G153600.1 Wheat cytosol, plastid 34.66 28.16
TraesCS5D01G088900.1 Wheat cytosol 34.26 28.1
CDY22112 Canola cytosol 53.78 28.01
Solyc08g013820.2.1 Tomato cytosol 41.43 27.96
HORVU2Hr1G027710.1 Barley cytosol 32.27 27.84
TraesCS1D01G126200.1 Wheat nucleus 32.27 27.84
TraesCS5A01G075400.1 Wheat cytosol 33.86 27.78
Zm00001d010914_P001 Maize cytosol 35.86 27.52
HORVU1Hr1G004970.3 Barley cytosol 35.46 27.47
TraesCS4B01G183800.1 Wheat cytosol 33.47 27.45
KXG24670 Sorghum cytosol 34.66 27.44
TraesCS2A01G313400.1 Wheat cytosol 33.86 27.33
TraesCS7A01G484100.1 Wheat cytosol 10.76 27.27
TraesCS2B01G178700.1 Wheat plastid 33.47 27.18
TraesCS2D01G159000.1 Wheat plastid 33.47 27.18
CDY09154 Canola plastid 61.35 27.16
Os08t0194350-00 Rice cytosol 28.69 27.07
Os08t0193200-00 Rice cytosol 12.35 26.96
TraesCS3B01G443800.1 Wheat nucleus 37.05 26.96
TraesCS2B01G332200.1 Wheat cytosol 33.47 26.84
TraesCS2D01G311900.1 Wheat cytosol 33.47 26.84
HORVU2Hr1G027770.2 Barley mitochondrion 32.27 26.82
Os02t0317500-01 Rice cytosol 35.06 26.67
Os11t0637300-00 Rice cytosol 12.75 26.67
TraesCS7B01G098400.1 Wheat cytosol 32.67 26.62
EES14679 Sorghum nucleus 36.26 26.45
TraesCS7B01G205200.1 Wheat mitochondrion 36.26 26.3
TraesCS7D01G300400.1 Wheat mitochondrion, nucleus 36.26 26.3
TraesCS7A01G193100.1 Wheat cytosol 32.27 26.3
Os02t0317300-01 Rice cytosol 34.26 26.22
HORVU0Hr1G019800.1 Barley cytosol 32.27 26.13
Os08t0193500-00 Rice cytosol 22.71 26.03
TraesCS7B01G287400.1 Wheat cytosol 33.47 26.01
TraesCS7D01G194300.1 Wheat cytosol 31.08 25.91
EES17669 Sorghum cytosol 34.26 25.9
TraesCS1A01G128000.1 Wheat cytosol 23.9 25.75
TraesCS3A01G410700.1 Wheat mitochondrion 35.86 25.71
TraesCS7D01G194400.1 Wheat extracellular 32.27 25.63
TraesCS5B01G484600.1 Wheat cytosol 21.12 25.48
Os08t0195800-00 Rice cytosol, mitochondrion, nucleus 35.06 25.43
TraesCS3B01G444000.1 Wheat nucleus 35.46 25.43
HORVU2Hr1G020470.1 Barley mitochondrion 11.95 25.42
HORVU5Hr1G020150.1 Barley mitochondrion 34.26 25.37
Zm00001d024265_P001 Maize cytosol 30.28 25.33
TraesCS2D01G070200.1 Wheat cytosol 32.67 25.31
TraesCS7D01G381100.1 Wheat mitochondrion 34.26 25.22
TraesCS3D01G405300.1 Wheat nucleus 35.06 25.14
TraesCS3A01G411000.1 Wheat nucleus 33.86 25.07
TraesCS5B01G484100.1 Wheat cytosol 22.31 25.0
TraesCS2B01G085400.1 Wheat cytosol 31.47 24.69
TraesCS2B01G085200.1 Wheat cytosol 31.47 24.38
TraesCS7B01G480000.1 Wheat cytosol 31.08 24.3
Zm00001d024764_P001 Maize cytosol 33.86 23.81
TraesCS5B01G484200.1 Wheat cytosol, peroxisome, plastid 17.93 23.32
TraesCS2B01G385500.1 Wheat cytosol, plasma membrane, plastid 20.72 23.21
TraesCS6B01G067700.1 Wheat plastid 24.7 23.13
Os08t0193900-01 Rice nucleus 36.26 22.98
TraesCS7D01G555100.1 Wheat cytosol 30.28 22.69
TraesCS2D01G011000.1 Wheat cytosol 28.69 22.64
Zm00001d046527_P001 Maize extracellular, mitochondrion, nucleus 19.92 22.52
OQU80174 Sorghum cytosol 11.95 22.39
TraesCS7D01G203600.1 Wheat plastid 30.28 22.29
Zm00001d046526_P001 Maize plastid 25.1 22.26
HORVU2Hr1G077990.2 Barley plastid 32.67 21.93
TraesCS3B01G452600.1 Wheat extracellular 28.69 21.82
TraesCS5D01G292400.1 Wheat cytosol 29.88 21.8
TraesCS3D01G413100.1 Wheat cytosol, endoplasmic reticulum, vacuole 29.88 21.55
TraesCS5B01G284300.1 Wheat cytosol 29.48 21.51
OQU80048 Sorghum cytosol 24.3 21.4
HORVU2Hr1G020540.2 Barley cytosol 23.9 21.35
TraesCS7D01G203500.1 Wheat plastid 28.69 21.18
TraesCS4D01G274100.1 Wheat cytosol 11.95 21.13
OQU80176 Sorghum mitochondrion 18.73 21.08
Os08t0193300-00 Rice cytosol 27.89 21.02
TraesCS6A01G090000.1 Wheat mitochondrion 28.29 20.11
TraesCS6B01G112000.1 Wheat mitochondrion 27.49 20.0
TraesCS6B01G112100.1 Wheat mitochondrion 27.89 20.0
TraesCS6A01G089600.1 Wheat cytosol, mitochondrion 27.09 19.94
TraesCS2A01G119000.1 Wheat nucleus 34.26 19.91
TraesCSU01G016500.1 Wheat mitochondrion 27.89 19.77
TraesCS3D01G413000.1 Wheat cytosol 33.86 19.41
TraesCS6B01G310200.1 Wheat plastid 27.89 19.39
TraesCS3B01G452400.1 Wheat cytosol 34.26 19.33
HORVU6Hr1G014660.1 Barley cytosol 16.33 19.25
Solyc08g006920.1.1 Tomato cytosol, mitochondrion, nucleus 23.11 19.14
Os08t0195900-00 Rice cytosol, mitochondrion, nucleus, plastid 22.71 18.87
EES14677 Sorghum cytosol, mitochondrion, nucleus, plastid 35.06 18.72
Os08t0191300-00 Rice cytosol, golgi 18.73 18.29
TraesCS6B01G067500.1 Wheat cytosol, extracellular 17.53 18.11
TraesCS3D01G412900.1 Wheat cytosol, plastid 33.47 17.95
TraesCS3B01G452300.1 Wheat plastid 33.07 17.85
HORVU6Hr1G070700.2 Barley mitochondrion 27.89 17.68
TraesCS3A01G417500.1 Wheat cytosol 27.49 17.65
Os08t0195000-00 Rice cytosol, peroxisome, plastid 17.53 17.6
TraesCS3B01G452500.1 Wheat cytosol 32.67 17.34
HORVU3Hr1G092720.1 Barley cytosol, mitochondrion, nucleus 32.67 17.3
TraesCSU01G016600.1 Wheat mitochondrion 18.33 17.04
TraesCS6A01G051000.1 Wheat plastid 24.7 16.67
TraesCS3A01G417400.1 Wheat cytosol 32.67 16.53
TraesCS5D01G484100.1 Wheat cytosol 22.71 15.36
HORVU6Hr1G070690.2 Barley extracellular, mitochondrion, plasma membrane 16.73 14.05
Os08t0196200-01 Rice cytosol 12.35 11.31
Os08t0194000-00 Rice cytosol, vacuole 1.2 0.79
Protein Annotations
Gene3D:1.20.1280.50Gene3D:3.80.10.10MapMan:35.1UniProt:A0A078IHK0EnsemblPlants:CDY48578ProteinID:CDY48578
ProteinID:CDY48578.1InterPro:F-box-like_dom_sfInterPro:F-box_domGO:GO:0003674GO:GO:0005488GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00091314001InterPro:IPR001810InterPro:IPR032675InterPro:LRR_dom_sfPFAM:PF12937PFscan:PS50181
PANTHER:PTHR44078PANTHER:PTHR44078:SF5SMART:SM00256SUPFAM:SSF52047SUPFAM:SSF81383UniParc:UPI0004EED137
SEG:seg:::::
Description
BnaA09g01740DBnaA09g01740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHK0]
Coordinates
chrLK032779:+:124405..125705
Molecular Weight (calculated)
28986.3 Da
IEP (calculated)
6.613
GRAVY (calculated)
-0.275
Length
251 amino acids
Sequence
(BLAST)
001: MKEGECINWA ELPSELTSSI LRRLSSIDIL ENAQRVCTSW RHVCKDPEMW RKVDMRNLVD VGLNLEIMCR HAVDRSQGGL VEIDIWNFAT DSLLNYIAES
101: RPGQEHNQKN RSLRLPLLEE LEFSYCPLSV ESLRLVGRSC PNLKTLKLNR LRLMRFPYES DDDALAIAET MPKLSHLQLF ANNLTDAGLN AILDNCPNLE
201: HLDLRECRNV KLSGDLRKRC SEKIKVLREP FGCIMLTHVL ELIYDMLHIS R
Best Arabidopsis Sequence Match ( AT4G05460.1 )
(BLAST)
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.