Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY21989 | Canola | cytosol | 30.68 | 95.06 |
Bra034230.1-P | Field mustard | cytosol | 89.64 | 85.55 |
CDY21988 | Canola | cytosol | 46.22 | 76.82 |
CDY48574 | Canola | cytosol | 70.92 | 59.73 |
CDY48580 | Canola | cytosol | 66.14 | 54.07 |
CDY48577 | Canola | cytosol | 58.96 | 52.48 |
CDY15937 | Canola | cytosol | 46.61 | 50.21 |
CDY48576 | Canola | cytosol | 59.36 | 50.17 |
CDX73787 | Canola | cytosol | 51.0 | 50.0 |
CDY21333 | Canola | nucleus, plastid | 58.57 | 50.0 |
CDX99649 | Canola | cytosol | 46.22 | 49.79 |
CDY59275 | Canola | plastid | 62.95 | 49.22 |
CDY21986 | Canola | cytosol, plastid | 58.57 | 49.0 |
CDX90789 | Canola | cytosol | 58.57 | 48.84 |
CDX77948 | Canola | cytosol | 32.27 | 47.93 |
CDY09910 | Canola | nucleus | 60.56 | 47.5 |
CDY62000 | Canola | plastid | 62.15 | 47.42 |
CDY21990 | Canola | cytosol | 36.26 | 47.4 |
CDY15618 | Canola | cytosol | 52.99 | 47.33 |
CDX86473 | Canola | cytosol | 47.01 | 46.09 |
CDY10283 | Canola | cytosol | 57.37 | 45.86 |
CDY48575 | Canola | plastid | 56.97 | 45.11 |
CDY06267 | Canola | nucleus | 61.35 | 44.25 |
PGSC0003DMT400058969 | Potato | cytosol | 15.14 | 42.7 |
PGSC0003DMT400016134 | Potato | cytosol | 43.43 | 37.59 |
VIT_10s0003g04300.t01 | Wine grape | cytosol | 47.81 | 37.38 |
KRH21099 | Soybean | cytosol | 45.42 | 36.66 |
PGSC0003DMT400052833 | Potato | cytosol | 39.84 | 36.36 |
TraesCS5B01G466500.1 | Wheat | extracellular | 15.14 | 36.19 |
KRH11147 | Soybean | cytosol | 45.82 | 36.16 |
Solyc08g013800.2.1 | Tomato | cytosol | 42.23 | 36.05 |
Solyc08g013780.1.1 | Tomato | cytosol | 17.53 | 35.77 |
PGSC0003DMT400015030 | Potato | cytosol | 41.43 | 35.14 |
PGSC0003DMT400015035 | Potato | cytosol | 42.23 | 34.64 |
TraesCS3B01G443100.1 | Wheat | cytosol | 35.46 | 34.5 |
Solyc08g006940.2.1 | Tomato | cytosol | 42.63 | 34.41 |
TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 35.46 | 33.33 |
PGSC0003DMT400090939 | Potato | cytosol | 39.44 | 32.67 |
PGSC0003DMT400054358 | Potato | cytosol | 42.63 | 31.56 |
TraesCS5B01G081700.1 | Wheat | cytosol | 19.92 | 30.12 |
TraesCS5D01G484300.1 | Wheat | cytosol | 24.3 | 30.05 |
TraesCS5A01G471800.1 | Wheat | cytosol | 23.9 | 29.56 |
Zm00001d024252_P001 | Maize | cytosol | 31.08 | 29.55 |
TraesCS5B01G484500.1 | Wheat | cytosol | 23.9 | 29.27 |
TraesCS2A01G071400.1 | Wheat | cytosol | 12.35 | 29.25 |
TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 23.51 | 29.21 |
TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 19.92 | 29.07 |
TraesCS1D01G034100.1 | Wheat | cytosol | 37.85 | 28.96 |
TraesCS1A01G033100.1 | Wheat | cytosol | 37.45 | 28.66 |
CDY21983 | Canola | cytosol | 32.27 | 28.62 |
TraesCS5B01G484300.1 | Wheat | cytosol | 23.11 | 28.57 |
TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 19.52 | 28.49 |
TraesCS1B01G041200.1 | Wheat | cytosol | 37.45 | 28.48 |
TraesCS4B01G183700.1 | Wheat | cytosol | 33.47 | 28.47 |
KXG24675 | Sorghum | cytosol | 32.67 | 28.47 |
TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 34.66 | 28.16 |
TraesCS5D01G088900.1 | Wheat | cytosol | 34.26 | 28.1 |
CDY22112 | Canola | cytosol | 53.78 | 28.01 |
Solyc08g013820.2.1 | Tomato | cytosol | 41.43 | 27.96 |
HORVU2Hr1G027710.1 | Barley | cytosol | 32.27 | 27.84 |
TraesCS1D01G126200.1 | Wheat | nucleus | 32.27 | 27.84 |
TraesCS5A01G075400.1 | Wheat | cytosol | 33.86 | 27.78 |
Zm00001d010914_P001 | Maize | cytosol | 35.86 | 27.52 |
HORVU1Hr1G004970.3 | Barley | cytosol | 35.46 | 27.47 |
TraesCS4B01G183800.1 | Wheat | cytosol | 33.47 | 27.45 |
KXG24670 | Sorghum | cytosol | 34.66 | 27.44 |
TraesCS2A01G313400.1 | Wheat | cytosol | 33.86 | 27.33 |
TraesCS7A01G484100.1 | Wheat | cytosol | 10.76 | 27.27 |
TraesCS2B01G178700.1 | Wheat | plastid | 33.47 | 27.18 |
TraesCS2D01G159000.1 | Wheat | plastid | 33.47 | 27.18 |
CDY09154 | Canola | plastid | 61.35 | 27.16 |
Os08t0194350-00 | Rice | cytosol | 28.69 | 27.07 |
Os08t0193200-00 | Rice | cytosol | 12.35 | 26.96 |
TraesCS3B01G443800.1 | Wheat | nucleus | 37.05 | 26.96 |
TraesCS2B01G332200.1 | Wheat | cytosol | 33.47 | 26.84 |
TraesCS2D01G311900.1 | Wheat | cytosol | 33.47 | 26.84 |
HORVU2Hr1G027770.2 | Barley | mitochondrion | 32.27 | 26.82 |
Os02t0317500-01 | Rice | cytosol | 35.06 | 26.67 |
Os11t0637300-00 | Rice | cytosol | 12.75 | 26.67 |
TraesCS7B01G098400.1 | Wheat | cytosol | 32.67 | 26.62 |
EES14679 | Sorghum | nucleus | 36.26 | 26.45 |
TraesCS7B01G205200.1 | Wheat | mitochondrion | 36.26 | 26.3 |
TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 36.26 | 26.3 |
TraesCS7A01G193100.1 | Wheat | cytosol | 32.27 | 26.3 |
Os02t0317300-01 | Rice | cytosol | 34.26 | 26.22 |
HORVU0Hr1G019800.1 | Barley | cytosol | 32.27 | 26.13 |
Os08t0193500-00 | Rice | cytosol | 22.71 | 26.03 |
TraesCS7B01G287400.1 | Wheat | cytosol | 33.47 | 26.01 |
TraesCS7D01G194300.1 | Wheat | cytosol | 31.08 | 25.91 |
EES17669 | Sorghum | cytosol | 34.26 | 25.9 |
TraesCS1A01G128000.1 | Wheat | cytosol | 23.9 | 25.75 |
TraesCS3A01G410700.1 | Wheat | mitochondrion | 35.86 | 25.71 |
TraesCS7D01G194400.1 | Wheat | extracellular | 32.27 | 25.63 |
TraesCS5B01G484600.1 | Wheat | cytosol | 21.12 | 25.48 |
Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 35.06 | 25.43 |
TraesCS3B01G444000.1 | Wheat | nucleus | 35.46 | 25.43 |
HORVU2Hr1G020470.1 | Barley | mitochondrion | 11.95 | 25.42 |
HORVU5Hr1G020150.1 | Barley | mitochondrion | 34.26 | 25.37 |
Zm00001d024265_P001 | Maize | cytosol | 30.28 | 25.33 |
TraesCS2D01G070200.1 | Wheat | cytosol | 32.67 | 25.31 |
TraesCS7D01G381100.1 | Wheat | mitochondrion | 34.26 | 25.22 |
TraesCS3D01G405300.1 | Wheat | nucleus | 35.06 | 25.14 |
TraesCS3A01G411000.1 | Wheat | nucleus | 33.86 | 25.07 |
TraesCS5B01G484100.1 | Wheat | cytosol | 22.31 | 25.0 |
TraesCS2B01G085400.1 | Wheat | cytosol | 31.47 | 24.69 |
TraesCS2B01G085200.1 | Wheat | cytosol | 31.47 | 24.38 |
TraesCS7B01G480000.1 | Wheat | cytosol | 31.08 | 24.3 |
Zm00001d024764_P001 | Maize | cytosol | 33.86 | 23.81 |
TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 17.93 | 23.32 |
TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 20.72 | 23.21 |
TraesCS6B01G067700.1 | Wheat | plastid | 24.7 | 23.13 |
Os08t0193900-01 | Rice | nucleus | 36.26 | 22.98 |
TraesCS7D01G555100.1 | Wheat | cytosol | 30.28 | 22.69 |
TraesCS2D01G011000.1 | Wheat | cytosol | 28.69 | 22.64 |
Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 19.92 | 22.52 |
OQU80174 | Sorghum | cytosol | 11.95 | 22.39 |
TraesCS7D01G203600.1 | Wheat | plastid | 30.28 | 22.29 |
Zm00001d046526_P001 | Maize | plastid | 25.1 | 22.26 |
HORVU2Hr1G077990.2 | Barley | plastid | 32.67 | 21.93 |
TraesCS3B01G452600.1 | Wheat | extracellular | 28.69 | 21.82 |
TraesCS5D01G292400.1 | Wheat | cytosol | 29.88 | 21.8 |
TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 29.88 | 21.55 |
TraesCS5B01G284300.1 | Wheat | cytosol | 29.48 | 21.51 |
OQU80048 | Sorghum | cytosol | 24.3 | 21.4 |
HORVU2Hr1G020540.2 | Barley | cytosol | 23.9 | 21.35 |
TraesCS7D01G203500.1 | Wheat | plastid | 28.69 | 21.18 |
TraesCS4D01G274100.1 | Wheat | cytosol | 11.95 | 21.13 |
OQU80176 | Sorghum | mitochondrion | 18.73 | 21.08 |
Os08t0193300-00 | Rice | cytosol | 27.89 | 21.02 |
TraesCS6A01G090000.1 | Wheat | mitochondrion | 28.29 | 20.11 |
TraesCS6B01G112000.1 | Wheat | mitochondrion | 27.49 | 20.0 |
TraesCS6B01G112100.1 | Wheat | mitochondrion | 27.89 | 20.0 |
TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 27.09 | 19.94 |
TraesCS2A01G119000.1 | Wheat | nucleus | 34.26 | 19.91 |
TraesCSU01G016500.1 | Wheat | mitochondrion | 27.89 | 19.77 |
TraesCS3D01G413000.1 | Wheat | cytosol | 33.86 | 19.41 |
TraesCS6B01G310200.1 | Wheat | plastid | 27.89 | 19.39 |
TraesCS3B01G452400.1 | Wheat | cytosol | 34.26 | 19.33 |
HORVU6Hr1G014660.1 | Barley | cytosol | 16.33 | 19.25 |
Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 23.11 | 19.14 |
Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 22.71 | 18.87 |
EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 35.06 | 18.72 |
Os08t0191300-00 | Rice | cytosol, golgi | 18.73 | 18.29 |
TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 17.53 | 18.11 |
TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 33.47 | 17.95 |
TraesCS3B01G452300.1 | Wheat | plastid | 33.07 | 17.85 |
HORVU6Hr1G070700.2 | Barley | mitochondrion | 27.89 | 17.68 |
TraesCS3A01G417500.1 | Wheat | cytosol | 27.49 | 17.65 |
Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 17.53 | 17.6 |
TraesCS3B01G452500.1 | Wheat | cytosol | 32.67 | 17.34 |
HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 32.67 | 17.3 |
TraesCSU01G016600.1 | Wheat | mitochondrion | 18.33 | 17.04 |
TraesCS6A01G051000.1 | Wheat | plastid | 24.7 | 16.67 |
TraesCS3A01G417400.1 | Wheat | cytosol | 32.67 | 16.53 |
TraesCS5D01G484100.1 | Wheat | cytosol | 22.71 | 15.36 |
HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 16.73 | 14.05 |
Os08t0196200-01 | Rice | cytosol | 12.35 | 11.31 |
Os08t0194000-00 | Rice | cytosol, vacuole | 1.2 | 0.79 |
Protein Annotations
Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A078IHK0 | EnsemblPlants:CDY48578 | ProteinID:CDY48578 |
ProteinID:CDY48578.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
EnsemblPlantsGene:GSBRNA2T00091314001 | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PFAM:PF12937 | PFscan:PS50181 |
PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 | SMART:SM00256 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI0004EED137 |
SEG:seg | : | : | : | : | : |
Description
BnaA09g01740DBnaA09g01740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHK0]
Coordinates
chrLK032779:+:124405..125705
Molecular Weight (calculated)
28986.3 Da
IEP (calculated)
6.613
GRAVY (calculated)
-0.275
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEGECINWA ELPSELTSSI LRRLSSIDIL ENAQRVCTSW RHVCKDPEMW RKVDMRNLVD VGLNLEIMCR HAVDRSQGGL VEIDIWNFAT DSLLNYIAES
101: RPGQEHNQKN RSLRLPLLEE LEFSYCPLSV ESLRLVGRSC PNLKTLKLNR LRLMRFPYES DDDALAIAET MPKLSHLQLF ANNLTDAGLN AILDNCPNLE
201: HLDLRECRNV KLSGDLRKRC SEKIKVLREP FGCIMLTHVL ELIYDMLHIS R
101: RPGQEHNQKN RSLRLPLLEE LEFSYCPLSV ESLRLVGRSC PNLKTLKLNR LRLMRFPYES DDDALAIAET MPKLSHLQLF ANNLTDAGLN AILDNCPNLE
201: HLDLRECRNV KLSGDLRKRC SEKIKVLREP FGCIMLTHVL ELIYDMLHIS R
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.