Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06267 | Canola | nucleus | 91.88 | 84.48 |
| CDY21988 | Canola | cytosol | 30.62 | 64.9 |
| CDY21333 | Canola | nucleus, plastid | 59.38 | 64.63 |
| CDY10283 | Canola | cytosol | 63.12 | 64.33 |
| AT4G05460.1 | Thale cress | cytosol | 60.62 | 64.24 |
| CDX86473 | Canola | cytosol | 49.06 | 61.33 |
| CDY48580 | Canola | cytosol | 58.44 | 60.91 |
| CDY15618 | Canola | cytosol | 53.44 | 60.85 |
| CDY48578 | Canola | cytosol | 47.5 | 60.56 |
| CDY48574 | Canola | cytosol | 56.25 | 60.4 |
| CDY59275 | Canola | plastid | 60.31 | 60.12 |
| CDX90789 | Canola | cytosol | 55.94 | 59.47 |
| CDY48576 | Canola | cytosol | 54.69 | 58.92 |
| CDY62000 | Canola | plastid | 59.06 | 57.45 |
| CDY21986 | Canola | cytosol, plastid | 53.44 | 57.0 |
| CDX73787 | Canola | cytosol | 45.0 | 56.25 |
| CDX99649 | Canola | cytosol | 40.94 | 56.22 |
| CDY48575 | Canola | plastid | 55.31 | 55.84 |
| CDX77948 | Canola | cytosol | 29.38 | 55.62 |
| CDY15937 | Canola | cytosol | 40.31 | 55.36 |
| CDY21989 | Canola | cytosol | 13.75 | 54.32 |
| CDY48577 | Canola | cytosol | 46.56 | 52.84 |
| CDY21990 | Canola | cytosol | 30.31 | 50.52 |
| KRH21099 | Soybean | cytosol | 47.19 | 48.55 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 45.62 | 45.48 |
| KRH11147 | Soybean | cytosol | 44.06 | 44.34 |
| PGSC0003DMT400058969 | Potato | cytosol | 12.19 | 43.82 |
| Solyc08g006940.2.1 | Tomato | cytosol | 42.19 | 43.41 |
| PGSC0003DMT400016134 | Potato | cytosol | 38.44 | 42.41 |
| PGSC0003DMT400052833 | Potato | cytosol | 35.62 | 41.45 |
| PGSC0003DMT400090939 | Potato | cytosol | 39.06 | 41.25 |
| Solyc08g013800.2.1 | Tomato | cytosol | 37.19 | 40.48 |
| Solyc08g013780.1.1 | Tomato | cytosol | 15.0 | 39.02 |
| PGSC0003DMT400015035 | Potato | cytosol | 37.19 | 38.89 |
| CDY21983 | Canola | cytosol | 34.38 | 38.87 |
| PGSC0003DMT400015030 | Potato | cytosol | 35.94 | 38.85 |
| PGSC0003DMT400054358 | Potato | cytosol | 38.75 | 36.58 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 30.31 | 36.33 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 18.12 | 34.94 |
| CDY09154 | Canola | plastid | 60.31 | 34.04 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 27.19 | 33.72 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 31.25 | 32.68 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 31.25 | 32.68 |
| CDY22112 | Canola | cytosol | 48.75 | 32.37 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 29.06 | 31.96 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 23.12 | 31.76 |
| Solyc08g013820.2.1 | Tomato | cytosol | 36.88 | 31.72 |
| Os02t0317500-01 | Rice | cytosol | 32.5 | 31.52 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 33.44 | 31.01 |
| Zm00001d010914_P001 | Maize | cytosol | 31.25 | 30.58 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 32.81 | 30.35 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 32.81 | 30.35 |
| EES14679 | Sorghum | nucleus | 32.19 | 29.94 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 31.56 | 29.79 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 28.44 | 29.74 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 15.94 | 29.65 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 18.75 | 29.56 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 18.75 | 29.56 |
| Zm00001d024252_P001 | Maize | cytosol | 24.38 | 29.55 |
| EES17669 | Sorghum | cytosol | 30.62 | 29.52 |
| KXG24675 | Sorghum | cytosol | 26.56 | 29.51 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 31.88 | 29.48 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 30.0 | 29.27 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 31.88 | 29.14 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 29.38 | 29.1 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 15.62 | 29.07 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 28.12 | 29.03 |
| Zm00001d024265_P001 | Maize | cytosol | 27.19 | 29.0 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 28.12 | 28.94 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 27.19 | 28.9 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 27.81 | 28.9 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 27.81 | 28.9 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 26.25 | 28.87 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 28.12 | 28.75 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 30.62 | 28.74 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 29.06 | 28.7 |
| Os02t0317300-01 | Rice | cytosol | 29.38 | 28.66 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 29.38 | 28.66 |
| Zm00001d046526_P001 | Maize | plastid | 25.31 | 28.62 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 30.31 | 28.61 |
| Os08t0194350-00 | Rice | cytosol | 23.75 | 28.57 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 31.25 | 28.57 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 31.25 | 28.57 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 9.38 | 28.57 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 29.38 | 28.48 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 26.25 | 28.47 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 27.81 | 28.43 |
| KXG24670 | Sorghum | cytosol | 28.12 | 28.39 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 18.12 | 28.29 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 17.81 | 28.08 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 18.12 | 27.88 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 27.5 | 27.85 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 26.88 | 27.83 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 26.25 | 27.81 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 17.5 | 27.72 |
| TraesCS2B01G178700.1 | Wheat | plastid | 26.56 | 27.51 |
| Os11t0637300-00 | Rice | cytosol | 10.31 | 27.5 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 8.44 | 27.27 |
| OQU80176 | Sorghum | mitochondrion | 18.75 | 26.91 |
| TraesCS2D01G159000.1 | Wheat | plastid | 25.94 | 26.86 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 26.56 | 26.23 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 25.94 | 25.86 |
| TraesCS7D01G203500.1 | Wheat | plastid | 27.19 | 25.59 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 25.31 | 25.31 |
| TraesCS7D01G203600.1 | Wheat | plastid | 26.56 | 24.93 |
| OQU80048 | Sorghum | cytosol | 22.19 | 24.91 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 24.69 | 24.84 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 25.94 | 24.78 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 25.0 | 24.69 |
| Os08t0193500-00 | Rice | cytosol | 16.88 | 24.66 |
| Zm00001d024764_P001 | Maize | cytosol | 27.5 | 24.65 |
| TraesCS6B01G067700.1 | Wheat | plastid | 20.62 | 24.63 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 17.19 | 24.55 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 16.88 | 24.32 |
| Os08t0193900-01 | Rice | nucleus | 29.69 | 23.99 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 8.75 | 23.73 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 16.56 | 23.66 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 24.38 | 23.64 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 7.81 | 23.58 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 25.62 | 23.56 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 25.94 | 23.51 |
| Os08t0193200-00 | Rice | cytosol | 8.44 | 23.48 |
| Os08t0191300-00 | Rice | cytosol, golgi | 18.75 | 23.35 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 10.31 | 23.24 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 25.62 | 23.16 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 15.31 | 23.0 |
| HORVU2Hr1G077990.2 | Barley | plastid | 26.88 | 22.99 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 24.69 | 22.97 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 25.0 | 22.86 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 30.62 | 22.69 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 24.38 | 22.67 |
| TraesCS6B01G310200.1 | Wheat | plastid | 25.31 | 22.44 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 19.69 | 22.42 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 23.75 | 22.29 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 23.75 | 22.03 |
| OQU80174 | Sorghum | cytosol | 9.06 | 21.64 |
| Os08t0193300-00 | Rice | cytosol | 22.5 | 21.62 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 16.25 | 21.4 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 12.81 | 21.24 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 17.81 | 21.11 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 30.94 | 21.06 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 19.69 | 20.79 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 25.0 | 20.2 |
| TraesCS6A01G051000.1 | Wheat | plastid | 23.44 | 20.16 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 15.0 | 19.2 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 26.25 | 19.18 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 26.56 | 19.1 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 28.12 | 18.99 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 17.81 | 18.87 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 27.81 | 18.82 |
| TraesCS3B01G452300.1 | Wheat | plastid | 26.88 | 18.49 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 17.19 | 18.39 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 26.88 | 18.38 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 27.5 | 17.74 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 21.56 | 17.65 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 17.19 | 14.82 |
| Os08t0196200-01 | Rice | cytosol | 8.75 | 10.22 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 0.94 | 0.79 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A078F5Z7 | EnsemblPlants:CDY09910 | ProteinID:CDY09910 |
| ProteinID:CDY09910.1 | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00031673001 |
| InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF12937 | PFscan:PS50181 |
| PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 | SMART:SM00367 | SUPFAM:SSF52047 | UniParc:UPI0004EC9DDA | SEG:seg |
Description
BnaC08g45410DBnaC08g45410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5Z7]
Coordinates
chrLK032000:-:33969..35830
Molecular Weight (calculated)
36092.0 Da
IEP (calculated)
4.340
GRAVY (calculated)
-0.463
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSSSSS SPSPTAMKEG DYYPNWAELP PELTSSILHR HGAIEIVETA QKVCRSWRRV CKDPSMWRKI DMRNLGDHGD MYYEKLCRHA VDLSQGELVE
101: IDIWHFGSDS LLSYVADSSS NLRSLKVAQC HEITSEGLIE AVAKLPLLEE LEVSYCSLSE ESLKVIGQSC PNLKTLKKNC VGYRRPRDEC DDVALAIAET
201: MPGLRHLQLF GDRLTDAGLN AILDGCPNLE HLDLRQCFNV DLVGDLEKRC LERVRVVRRP NDSVHDYPFD ATVNDVSSSD DGDPYGLSDV DILSEDEFYY
301: DDLSEYASDN SDFDPYEYYY
101: IDIWHFGSDS LLSYVADSSS NLRSLKVAQC HEITSEGLIE AVAKLPLLEE LEVSYCSLSE ESLKVIGQSC PNLKTLKKNC VGYRRPRDEC DDVALAIAET
201: MPGLRHLQLF GDRLTDAGLN AILDGCPNLE HLDLRQCFNV DLVGDLEKRC LERVRVVRRP NDSVHDYPFD ATVNDVSSSD DGDPYGLSDV DILSEDEFYY
301: DDLSEYASDN SDFDPYEYYY
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.