CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES04173

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G05460.1	EES04173	AT4G02570.1	12795696

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024265_P001	Maize	cytosol	49.33	36.67
CDY21989	Canola	cytosol	11.21	30.86
OQU80048	Sorghum	cytosol	39.01	30.53
PGSC0003DMT400058969	Potato	cytosol	12.11	30.34
Bra000817.1-P	Field mustard	plastid	24.22	30.0
TraesCS2A01G313400.1	Wheat	cytosol	40.81	29.26
TraesCS2D01G311900.1	Wheat	cytosol	40.36	28.75
TraesCS2B01G332200.1	Wheat	cytosol	39.91	28.43
TraesCS4B01G183700.1	Wheat	cytosol	37.22	28.14
TraesCS4B01G183800.1	Wheat	cytosol	38.56	28.1
TraesCS7B01G098400.1	Wheat	cytosol	38.12	27.6
Solyc08g013780.1.1	Tomato	cytosol	14.8	26.83
TraesCS7A01G193100.1	Wheat	cytosol	36.32	26.3
TraesCS7D01G194400.1	Wheat	extracellular	36.77	25.95
TraesCS7D01G194300.1	Wheat	cytosol	34.98	25.91
AT4G03630.1	Thale cress	cytosol	25.56	25.91
EES14679	Sorghum	nucleus	39.91	25.87
HORVU0Hr1G019800.1	Barley	cytosol	35.43	25.48
TraesCS2D01G011000.1	Wheat	cytosol	34.98	24.53
HORVU2Hr1G077990.2	Barley	plastid	39.46	23.53
AT5G52480.1	Thale cress	cytosol	25.11	23.24
Bra000723.1-P	Field mustard	cytosol	15.7	23.03
KRH21099	Soybean	cytosol	31.84	22.83
EES17669	Sorghum	cytosol	33.18	22.29
CDY48580	Canola	cytosol	30.04	21.82
VIT_10s0003g04300.t01	Wine grape	cytosol	31.39	21.81
PGSC0003DMT400090939	Potato	cytosol	28.7	21.12
CDX86473	Canola	cytosol	24.22	21.09
CDX99649	Canola	cytosol	21.97	21.03
Bra034230.1-P	Field mustard	cytosol	24.66	20.91
Solyc08g006940.2.1	Tomato	cytosol	29.15	20.9
CDY48574	Canola	cytosol	27.8	20.81
Bra034227.1-P	Field mustard	plastid	29.6	20.75
CDY21333	Canola	nucleus, plastid	27.35	20.75
CDY15937	Canola	cytosol	21.52	20.6
CDX90789	Canola	cytosol	27.8	20.6
KRH11147	Soybean	cytosol	29.15	20.44
CDX73787	Canola	cytosol	23.32	20.31
CDY15618	Canola	cytosol	25.56	20.28
Bra030690.1-P	Field mustard	cytosol	25.56	20.28
CDY48575	Canola	plastid	28.7	20.19
Bra030342.1-P	Field mustard	cytosol	21.08	20.17
KXG24675	Sorghum	cytosol	26.01	20.14
AT4G05460.1	Thale cress	cytosol	26.91	19.87
Bra034229.1-P	Field mustard	cytosol	24.22	19.57
CDY48576	Canola	cytosol	26.01	19.53
Bra034228.1-P	Field mustard	cytosol	26.01	19.53
Solyc08g013800.2.1	Tomato	cytosol	25.56	19.39
AT4G05470.1	Thale cress	cytosol, plastid	26.46	19.28
PGSC0003DMT400052833	Potato	cytosol	23.77	19.27
AT4G05490.1	Thale cress	plastid	26.46	19.22
EES14677	Sorghum	cytosol, mitochondrion, nucleus, plastid	40.36	19.15
AT4G05475.1	Thale cress	cytosol	26.01	18.77
CDY09910	Canola	nucleus	26.91	18.75
CDY21983	Canola	cytosol	23.77	18.73
CDY48578	Canola	cytosol	21.08	18.73
CDY21986	Canola	cytosol, plastid	25.11	18.67
Bra000816.1-P	Field mustard	plastid	26.91	18.46
CDY59275	Canola	plastid	26.46	18.38
PGSC0003DMT400015035	Potato	cytosol	24.66	17.97
CDY62000	Canola	plastid	26.46	17.93
PGSC0003DMT400016134	Potato	cytosol	23.32	17.93
Bra034231.1-P	Field mustard	cytosol, plastid	20.63	17.76
Bra034226.1-P	Field mustard	cytosol	22.87	17.71
CDY06267	Canola	nucleus	27.35	17.53
Bra031582.1-P	Field mustard	nucleus	27.35	17.43
PGSC0003DMT400015030	Potato	cytosol	22.87	17.23
CDY10283	Canola	cytosol	24.22	17.2
PGSC0003DMT400054358	Potato	cytosol	26.01	17.11
CDY48577	Canola	cytosol	21.52	17.02
KXG24670	Sorghum	cytosol	23.77	16.72
AT4G05497.1	Thale cress	plastid	17.94	16.26
Solyc08g006920.1.1	Tomato	cytosol, mitochondrion, nucleus	21.97	16.17
Solyc08g013820.2.1	Tomato	cytosol	26.01	15.59
CDY21988	Canola	cytosol	8.97	13.24
CDX77948	Canola	cytosol	8.97	11.83
Bra034194.1-P	Field mustard	cytosol	26.91	11.21
CDY09154	Canola	plastid	26.91	10.58
Bra020205.1-P	Field mustard	plastid	26.91	10.58
CDY22112	Canola	cytosol	19.73	9.13
CDY21990	Canola	cytosol	7.62	8.85
OQU80174	Sorghum	cytosol	2.24	3.73

Protein Annotations

EnsemblPlants:OQU80176	EnsemblPlantsGene:SORBI_3007G090451	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR44078
PANTHER:PTHR44078:SF2	ProteinID:OQU80176	ProteinID:OQU80176.1	SEG:seg	SUPFAM:SSF52047	UniParc:UPI000B8BAF94
UniProt:A0A1Z5R9X4	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:13837343..13838647

Molecular Weight (calculated)

24904.9 Da

IEP (calculated)

7.051

GRAVY (calculated)

-0.181

Length

223 amino acids

Sequence
(BLAST)

001: MLKHLTTRSI RLIHVLLPCR APQLKSLRLI SCESISKQGL NLPIRKFHML EELELSLHSG VVTTSSFFSL AETCNAAAEA CPLLKRFRLN KYCFHWRSGI
101: GDSEATEIGK MRGLQFLQLF GNSLGNDGLT TILRGCVRLE SLDVRHCFNV EINDQVRAEC ARLQTLRLPD DSVDDYDLSF GSPERGIPDF YRNVGDPDDD
201: PDPTVATVRA ASVISCSYSG RSQ

Best Arabidopsis Sequence Match ( AT4G03630.1 )
(BLAST)

001: MNNEDFNADE LLTFVAYRSS ILKRLGRMMC HAVALSQGGC VEINIEHFGT DSLLTYIADR SSNLRHLGLA KCDQITGMGL FTEAMKLPLL EDLELSYCLI
101: KGKNLEAIGF ACLHLKTLKL NCQGFKFPGF TYDHDALGIA KRMPELRCLQ LFGNRVSDVG LNAIFDGCPH LEHLDLRQCF NINLVGDLEK RCMERIKDLR
201: RPNDSTADYP YDTSLLDLGI

Arabidopsis Description

Putative nodulin [Source:UniProtKB/TrEMBL;Acc:Q9SY41]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.