Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G52480.1 | Thale cress | cytosol | 47.73 | 43.57 |
| CDX73787 | Canola | cytosol | 48.64 | 41.8 |
| AT4G05497.1 | Thale cress | plastid | 46.36 | 41.46 |
| AT4G05475.1 | Thale cress | cytosol | 56.36 | 40.13 |
| Solyc08g013780.1.1 | Tomato | cytosol | 22.27 | 39.84 |
| AT4G05470.1 | Thale cress | cytosol, plastid | 55.0 | 39.54 |
| PGSC0003DMT400058969 | Potato | cytosol | 15.91 | 39.33 |
| AT4G05490.1 | Thale cress | plastid | 54.55 | 39.09 |
| AT4G05460.1 | Thale cress | cytosol | 53.64 | 39.07 |
| KRH21099 | Soybean | cytosol | 48.64 | 34.41 |
| CDX77948 | Canola | cytosol | 26.36 | 34.32 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 50.0 | 34.27 |
| KRH11147 | Soybean | cytosol | 47.73 | 33.02 |
| Solyc08g013800.2.1 | Tomato | cytosol | 41.82 | 31.29 |
| Solyc08g006940.2.1 | Tomato | cytosol | 43.64 | 30.87 |
| PGSC0003DMT400015030 | Potato | cytosol | 40.91 | 30.41 |
| PGSC0003DMT400015035 | Potato | cytosol | 42.27 | 30.39 |
| PGSC0003DMT400090939 | Potato | cytosol | 41.82 | 30.36 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 31.82 | 30.04 |
| PGSC0003DMT400016134 | Potato | cytosol | 38.64 | 29.31 |
| PGSC0003DMT400052833 | Potato | cytosol | 35.0 | 28.0 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 32.27 | 27.52 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 33.18 | 27.34 |
| Zm00001d024252_P001 | Maize | cytosol | 32.73 | 27.27 |
| PGSC0003DMT400054358 | Potato | cytosol | 41.82 | 27.14 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 37.27 | 26.8 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 36.82 | 26.47 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 35.0 | 26.46 |
| KXG24675 | Sorghum | cytosol | 34.09 | 26.04 |
| Os08t0194350-00 | Rice | cytosol | 31.36 | 25.94 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 34.55 | 25.76 |
| OQU80176 | Sorghum | mitochondrion | 25.91 | 25.56 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 33.18 | 25.09 |
| Os02t0317500-01 | Rice | cytosol | 37.27 | 24.85 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 38.64 | 24.64 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 34.55 | 24.44 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 38.64 | 24.29 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 38.64 | 24.29 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 34.09 | 24.27 |
| TraesCS2B01G178700.1 | Wheat | plastid | 34.09 | 24.27 |
| Solyc08g013820.2.1 | Tomato | cytosol | 40.91 | 24.19 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 37.27 | 24.19 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 33.18 | 24.17 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 34.09 | 23.96 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 34.09 | 23.96 |
| OQU80048 | Sorghum | cytosol | 30.91 | 23.86 |
| TraesCS2D01G159000.1 | Wheat | plastid | 33.18 | 23.62 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 36.36 | 23.6 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 32.73 | 23.53 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 17.73 | 23.49 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 37.27 | 23.43 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 23.64 | 23.42 |
| Zm00001d024265_P001 | Maize | cytosol | 31.82 | 23.33 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 21.36 | 23.15 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 36.36 | 23.12 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 36.36 | 23.12 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 32.27 | 23.05 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 31.36 | 22.92 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 34.09 | 22.87 |
| EES14679 | Sorghum | nucleus | 35.45 | 22.67 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 20.91 | 22.66 |
| Zm00001d010914_P001 | Maize | cytosol | 33.64 | 22.63 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 31.82 | 22.58 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 33.18 | 22.53 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 33.18 | 22.53 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 32.73 | 22.43 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 28.64 | 22.42 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 31.36 | 22.4 |
| EES17669 | Sorghum | cytosol | 33.64 | 22.29 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 35.0 | 22.25 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 32.73 | 22.22 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 33.18 | 22.12 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 17.27 | 22.09 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 32.27 | 21.98 |
| Os02t0317300-01 | Rice | cytosol | 32.73 | 21.95 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 32.73 | 21.95 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 20.45 | 21.95 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 31.82 | 21.88 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 20.0 | 21.78 |
| KXG24670 | Sorghum | cytosol | 31.36 | 21.77 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 20.0 | 21.67 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 30.91 | 21.52 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 16.82 | 21.51 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 32.73 | 21.49 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 32.73 | 21.11 |
| Os08t0191300-00 | Rice | cytosol, golgi | 24.55 | 21.01 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 22.73 | 20.58 |
| Zm00001d046526_P001 | Maize | plastid | 26.36 | 20.49 |
| Zm00001d024764_P001 | Maize | cytosol | 32.73 | 20.17 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 31.36 | 20.06 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 28.64 | 19.81 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 30.91 | 19.77 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 18.64 | 19.71 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 20.0 | 19.64 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 30.91 | 19.54 |
| Os08t0193900-01 | Rice | nucleus | 35.0 | 19.44 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 19.55 | 19.2 |
| Os08t0193300-00 | Rice | cytosol | 28.64 | 18.92 |
| Os08t0193500-00 | Rice | cytosol | 18.64 | 18.72 |
| HORVU2Hr1G077990.2 | Barley | plastid | 31.82 | 18.72 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 27.73 | 18.48 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 25.0 | 18.39 |
| TraesCS6B01G310200.1 | Wheat | plastid | 30.0 | 18.28 |
| TraesCS7D01G203600.1 | Wheat | plastid | 28.18 | 18.18 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 8.64 | 17.92 |
| TraesCS7D01G203500.1 | Wheat | plastid | 27.27 | 17.65 |
| TraesCS6B01G067700.1 | Wheat | plastid | 21.36 | 17.54 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 27.73 | 17.28 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 30.91 | 17.17 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 23.64 | 17.16 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 8.18 | 17.14 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 16.36 | 16.9 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 26.82 | 16.86 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 32.73 | 16.67 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 26.82 | 16.67 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 25.45 | 16.42 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 35.0 | 16.38 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 25.0 | 15.94 |
| Os11t0637300-00 | Rice | cytosol | 8.64 | 15.83 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 13.18 | 15.03 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 28.64 | 14.38 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 30.91 | 14.38 |
| TraesCS6A01G051000.1 | Wheat | plastid | 24.09 | 14.25 |
| TraesCS3B01G452300.1 | Wheat | plastid | 30.0 | 14.19 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 28.64 | 14.16 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 30.45 | 14.13 |
| Os08t0193200-00 | Rice | cytosol | 7.27 | 13.91 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 29.55 | 13.89 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 30.0 | 13.31 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 15.91 | 12.96 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 14.55 | 12.8 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 17.27 | 12.58 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 5.45 | 12.12 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 21.36 | 12.02 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 19.09 | 11.32 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 6.82 | 10.56 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 5.45 | 10.17 |
| OQU80174 | Sorghum | cytosol | 5.91 | 9.7 |
| Os08t0196200-01 | Rice | cytosol | 4.55 | 3.65 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 0.91 | 0.53 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:825663 | ProteinID:AAD15319.1 | ProteinID:AEE82347.1 | ArrayExpress:AT4G03630 |
| EnsemblPlantsGene:AT4G03630 | RefSeq:AT4G03630 | TAIR:AT4G03630 | RefSeq:AT4G03630-TAIR-G | EnsemblPlants:AT4G03630.1 | TAIR:AT4G03630.1 |
| Unigene:At.54122 | ProteinID:CAB77848.1 | EMBL:DQ056642 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | RefSeq:NP_192272.1 |
| PFAM:PF13516 | PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 | UniProt:Q9SY41 | SMART:SM00367 | SUPFAM:SSF52047 |
| UniParc:UPI000009FC36 | : | : | : | : | : |
Description
Putative nodulin [Source:UniProtKB/TrEMBL;Acc:Q9SY41]
Coordinates
chr4:+:1608750..1610037
Molecular Weight (calculated)
24767.1 Da
IEP (calculated)
6.148
GRAVY (calculated)
-0.067
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNEDFNADE LLTFVAYRSS ILKRLGRMMC HAVALSQGGC VEINIEHFGT DSLLTYIADR SSNLRHLGLA KCDQITGMGL FTEAMKLPLL EDLELSYCLI
101: KGKNLEAIGF ACLHLKTLKL NCQGFKFPGF TYDHDALGIA KRMPELRCLQ LFGNRVSDVG LNAIFDGCPH LEHLDLRQCF NINLVGDLEK RCMERIKDLR
201: RPNDSTADYP YDTSLLDLGI
101: KGKNLEAIGF ACLHLKTLKL NCQGFKFPGF TYDHDALGIA KRMPELRCLQ LFGNRVSDVG LNAIFDGCPH LEHLDLRQCF NINLVGDLEK RCMERIKDLR
201: RPNDSTADYP YDTSLLDLGI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.