Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G05470.1 | Thale cress | cytosol, plastid | 72.82 | 73.53 |
| AT4G03630.1 | Thale cress | cytosol | 40.13 | 56.36 |
| AT4G05497.1 | Thale cress | plastid | 40.78 | 51.22 |
| AT4G05490.1 | Thale cress | plastid | 45.63 | 45.93 |
| AT5G52480.1 | Thale cress | cytosol | 35.28 | 45.23 |
| AT4G05460.1 | Thale cress | cytosol | 43.37 | 44.37 |
| PGSC0003DMT400058969 | Potato | cytosol | 11.97 | 41.57 |
| Solyc08g013780.1.1 | Tomato | cytosol | 16.18 | 40.65 |
| KRH21099 | Soybean | cytosol | 39.48 | 39.23 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 39.48 | 38.01 |
| KRH11147 | Soybean | cytosol | 38.84 | 37.74 |
| PGSC0003DMT400015030 | Potato | cytosol | 35.6 | 37.16 |
| PGSC0003DMT400052833 | Potato | cytosol | 32.04 | 36.0 |
| PGSC0003DMT400016134 | Potato | cytosol | 33.66 | 35.86 |
| Solyc08g013800.2.1 | Tomato | cytosol | 33.66 | 35.37 |
| PGSC0003DMT400015035 | Potato | cytosol | 34.95 | 35.29 |
| Solyc08g006940.2.1 | Tomato | cytosol | 34.63 | 34.41 |
| PGSC0003DMT400090939 | Potato | cytosol | 32.69 | 33.33 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 28.8 | 33.33 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 26.86 | 32.17 |
| PGSC0003DMT400054358 | Potato | cytosol | 34.95 | 31.86 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 28.8 | 30.58 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 20.06 | 30.54 |
| KXG24675 | Sorghum | cytosol | 28.16 | 30.21 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 32.04 | 30.18 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 28.8 | 30.17 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 16.18 | 30.12 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 19.74 | 30.05 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 22.65 | 30.04 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 31.72 | 29.88 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 19.42 | 29.56 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 29.13 | 29.41 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 29.13 | 29.22 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 27.51 | 29.21 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 19.09 | 29.21 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 31.07 | 29.09 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 28.8 | 29.09 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 16.18 | 29.07 |
| Zm00001d010914_P001 | Maize | cytosol | 30.74 | 29.05 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 30.42 | 29.01 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 32.04 | 28.7 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 32.04 | 28.61 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 32.36 | 28.57 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 9.71 | 28.57 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 15.86 | 28.49 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 28.16 | 28.43 |
| Zm00001d024252_P001 | Maize | cytosol | 24.27 | 28.41 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 28.48 | 28.39 |
| Os02t0317300-01 | Rice | cytosol | 30.1 | 28.35 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 31.72 | 28.32 |
| EES17669 | Sorghum | cytosol | 30.42 | 28.31 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 18.77 | 28.29 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 27.51 | 28.24 |
| Solyc08g013820.2.1 | Tomato | cytosol | 33.98 | 28.23 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 27.51 | 28.15 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 28.16 | 27.97 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 30.42 | 27.73 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 27.51 | 27.6 |
| Os02t0317500-01 | Rice | cytosol | 29.45 | 27.58 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 27.51 | 27.51 |
| TraesCS2D01G159000.1 | Wheat | plastid | 27.51 | 27.51 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 27.83 | 27.48 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 30.74 | 27.46 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 31.07 | 27.43 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 31.07 | 27.43 |
| EES14679 | Sorghum | nucleus | 30.42 | 27.33 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 27.83 | 27.22 |
| TraesCS2B01G178700.1 | Wheat | plastid | 27.18 | 27.18 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 27.51 | 27.16 |
| Os08t0194350-00 | Rice | cytosol | 23.3 | 27.07 |
| Zm00001d024265_P001 | Maize | cytosol | 26.21 | 27.0 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 28.16 | 26.85 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 29.13 | 26.55 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 17.8 | 26.44 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 9.06 | 26.42 |
| KXG24670 | Sorghum | cytosol | 26.86 | 26.18 |
| OQU80176 | Sorghum | mitochondrion | 18.77 | 26.01 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 27.18 | 25.93 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 18.77 | 25.89 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 26.86 | 25.86 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 28.48 | 25.81 |
| Zm00001d046526_P001 | Maize | plastid | 23.62 | 25.8 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 26.86 | 25.7 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 26.54 | 25.62 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 18.45 | 25.45 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 27.51 | 25.37 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 18.12 | 25.23 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 25.89 | 25.16 |
| Os11t0637300-00 | Rice | cytosol | 9.71 | 25.0 |
| Zm00001d024764_P001 | Maize | cytosol | 28.8 | 24.93 |
| Os08t0193200-00 | Rice | cytosol | 9.06 | 24.35 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 7.77 | 24.24 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 26.86 | 23.85 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 14.89 | 23.83 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 25.24 | 23.64 |
| Os08t0193900-01 | Rice | nucleus | 30.1 | 23.48 |
| TraesCS7D01G203600.1 | Wheat | plastid | 25.57 | 23.17 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 21.04 | 23.13 |
| TraesCS7D01G203500.1 | Wheat | plastid | 25.24 | 22.94 |
| OQU80048 | Sorghum | cytosol | 21.04 | 22.81 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 24.92 | 22.38 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 25.24 | 22.29 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 25.24 | 22.1 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 24.6 | 22.09 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 25.24 | 22.03 |
| TraesCS6B01G067700.1 | Wheat | plastid | 19.09 | 22.01 |
| HORVU2Hr1G077990.2 | Barley | plastid | 26.54 | 21.93 |
| TraesCS6B01G310200.1 | Wheat | plastid | 25.57 | 21.88 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 23.95 | 21.45 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 8.09 | 21.19 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 29.45 | 21.06 |
| Os08t0193500-00 | Rice | cytosol | 14.89 | 21.0 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 31.39 | 20.64 |
| Os08t0191300-00 | Rice | cytosol, golgi | 17.15 | 20.62 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 22.65 | 20.53 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 13.92 | 20.19 |
| Os08t0193300-00 | Rice | cytosol | 21.68 | 20.12 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 17.48 | 20.0 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 15.53 | 19.75 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 19.09 | 19.47 |
| OQU80174 | Sorghum | cytosol | 8.41 | 19.4 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 24.6 | 19.19 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 18.12 | 18.73 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 26.86 | 18.65 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 26.21 | 18.49 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 28.16 | 18.39 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 27.51 | 18.16 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 27.83 | 18.14 |
| TraesCS3B01G452300.1 | Wheat | plastid | 27.18 | 18.06 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 8.09 | 17.61 |
| TraesCS6A01G051000.1 | Wheat | plastid | 21.04 | 17.47 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 27.83 | 17.34 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 21.04 | 16.62 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 16.18 | 16.56 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 12.62 | 15.6 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 18.45 | 15.36 |
| Os08t0196200-01 | Rice | cytosol | 7.44 | 8.39 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 0.97 | 0.79 |
Protein Annotations
| EntrezGene:10723048 | Gene3D:3.80.10.10 | MapMan:35.1 | EMBL:AC012477 | ProteinID:AEE82525.1 | ArrayExpress:AT4G05475 |
| EnsemblPlantsGene:AT4G05475 | RefSeq:AT4G05475 | TAIR:AT4G05475 | RefSeq:AT4G05475-TAIR-G | EnsemblPlants:AT4G05475.1 | TAIR:AT4G05475.1 |
| Unigene:At.75540 | ProteinID:CAB81090.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | RefSeq:NP_001190683.1 | PFAM:PF12937 |
| PFscan:PS50181 | PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 | UniProt:Q9M0U7 | SMART:SM00256 | SUPFAM:SSF52047 |
| SUPFAM:SSF81383 | UniParc:UPI0001E93022 | : | : | : | : |
Description
Putative F-box protein At4g05475 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U7]
Coordinates
chr4:-:2765962..2767957
Molecular Weight (calculated)
35380.3 Da
IEP (calculated)
7.021
GRAVY (calculated)
-0.211
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSTTLQSL LMKEDEEQRN KRRTTSTMFL KKDDEERINW VDLPPELTTS ILLRLSVTDI LDNARKLCRA WRRICKDPSM WRKINLRDCL MYEFDFESMC
101: RHIVDLSQGG LLEINIEHFV SDSLLSYIVD RSCNLKSLGI SIYEPMTNKG VMNGIEKLPL LETLVIFHSS IKLDLKAIGH ACPQLKTLKL NSLGSELAHD
201: ISQVGYIPLL ECDDDALAIA ESMPKLRHLQ LMGNGLTNTG LNAILDGCPH LEEHLDVRKC FNINLVGNLE KRCMKRIKEL RRPHDSTADY PYSISVSMVV
301: QMMITSRYH
101: RHIVDLSQGG LLEINIEHFV SDSLLSYIVD RSCNLKSLGI SIYEPMTNKG VMNGIEKLPL LETLVIFHSS IKLDLKAIGH ACPQLKTLKL NSLGSELAHD
201: ISQVGYIPLL ECDDDALAIA ESMPKLRHLQ LMGNGLTNTG LNAILDGCPH LEEHLDVRKC FNINLVGNLE KRCMKRIKEL RRPHDSTADY PYSISVSMVV
301: QMMITSRYH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.