Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G03630.1 | Thale cress | cytosol | 43.57 | 47.73 |
| PGSC0003DMT400058969 | Potato | cytosol | 15.77 | 42.7 |
| CDX73787 | Canola | cytosol | 44.4 | 41.8 |
| Solyc08g013780.1.1 | Tomato | cytosol | 20.75 | 40.65 |
| AT4G05460.1 | Thale cress | cytosol | 50.21 | 40.07 |
| AT4G05470.1 | Thale cress | cytosol, plastid | 46.47 | 36.6 |
| AT4G05490.1 | Thale cress | plastid | 45.23 | 35.5 |
| AT4G05475.1 | Thale cress | cytosol | 45.23 | 35.28 |
| AT4G05497.1 | Thale cress | plastid | 35.68 | 34.96 |
| KRH21099 | Soybean | cytosol | 42.32 | 32.8 |
| KRH11147 | Soybean | cytosol | 41.49 | 31.45 |
| CDX77948 | Canola | cytosol | 21.99 | 31.36 |
| Solyc08g013800.2.1 | Tomato | cytosol | 38.17 | 31.29 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 41.08 | 30.84 |
| PGSC0003DMT400015030 | Potato | cytosol | 37.34 | 30.41 |
| PGSC0003DMT400052833 | Potato | cytosol | 33.61 | 29.45 |
| Solyc08g006940.2.1 | Tomato | cytosol | 37.34 | 28.94 |
| PGSC0003DMT400015035 | Potato | cytosol | 36.51 | 28.76 |
| PGSC0003DMT400090939 | Potato | cytosol | 34.44 | 27.39 |
| PGSC0003DMT400016134 | Potato | cytosol | 32.37 | 26.9 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 32.37 | 25.49 |
| Os02t0317300-01 | Rice | cytosol | 34.44 | 25.3 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 31.95 | 25.16 |
| OQU80176 | Sorghum | mitochondrion | 23.24 | 25.11 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 24.07 | 24.89 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 33.61 | 24.7 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 33.2 | 24.39 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 32.78 | 24.38 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 22.41 | 24.32 |
| Os02t0317500-01 | Rice | cytosol | 33.2 | 24.24 |
| Zm00001d010914_P001 | Maize | cytosol | 32.78 | 24.16 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 21.16 | 23.94 |
| PGSC0003DMT400054358 | Potato | cytosol | 33.61 | 23.89 |
| Zm00001d024252_P001 | Maize | cytosol | 26.14 | 23.86 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 32.37 | 23.64 |
| EES17669 | Sorghum | cytosol | 32.37 | 23.49 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 16.18 | 23.49 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 31.54 | 23.46 |
| Solyc08g013820.2.1 | Tomato | cytosol | 36.1 | 23.39 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 32.78 | 23.3 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 24.9 | 23.26 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 16.6 | 23.26 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 25.73 | 23.22 |
| OQU80048 | Sorghum | cytosol | 27.39 | 23.16 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 28.22 | 23.05 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 27.8 | 23.02 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 16.18 | 22.67 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 30.29 | 22.6 |
| KXG24675 | Sorghum | cytosol | 26.97 | 22.57 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 30.29 | 22.53 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 29.88 | 22.5 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 26.97 | 22.34 |
| Zm00001d024265_P001 | Maize | cytosol | 27.8 | 22.33 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 27.8 | 22.19 |
| KXG24670 | Sorghum | cytosol | 29.05 | 22.08 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 28.22 | 22.08 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 27.8 | 21.9 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 27.8 | 21.68 |
| TraesCS2D01G159000.1 | Wheat | plastid | 27.8 | 21.68 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 27.39 | 21.43 |
| TraesCS2B01G178700.1 | Wheat | plastid | 27.39 | 21.36 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 24.9 | 21.35 |
| Os08t0194350-00 | Rice | cytosol | 23.24 | 21.05 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 17.84 | 20.98 |
| EES14679 | Sorghum | nucleus | 29.88 | 20.93 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 26.14 | 20.93 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 27.39 | 20.89 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 27.8 | 20.87 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 29.88 | 20.87 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 17.43 | 20.69 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 17.84 | 20.67 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 26.56 | 20.65 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 26.56 | 20.58 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 20.75 | 20.58 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 29.05 | 20.53 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 29.46 | 20.52 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 27.8 | 20.3 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 29.46 | 20.29 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 29.46 | 20.29 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 17.01 | 20.2 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 26.14 | 20.13 |
| Os08t0193300-00 | Rice | cytosol | 27.8 | 20.12 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 29.05 | 20.0 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 27.8 | 20.0 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 28.63 | 19.83 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 25.73 | 19.81 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 27.8 | 19.76 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 28.22 | 19.65 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 28.22 | 19.65 |
| Zm00001d024764_P001 | Maize | cytosol | 29.05 | 19.61 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 16.18 | 19.31 |
| Os08t0191300-00 | Rice | cytosol, golgi | 20.33 | 19.07 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 24.9 | 18.87 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 17.43 | 18.75 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 15.77 | 18.72 |
| TraesCS7D01G203600.1 | Wheat | plastid | 25.73 | 18.18 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 16.6 | 17.86 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 26.14 | 17.85 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 25.31 | 17.73 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 25.73 | 17.71 |
| Os08t0193900-01 | Rice | nucleus | 29.05 | 17.68 |
| TraesCS7D01G203500.1 | Wheat | plastid | 24.9 | 17.65 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 24.9 | 17.44 |
| Zm00001d046526_P001 | Maize | plastid | 20.33 | 17.31 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 24.48 | 17.3 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 25.31 | 17.23 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 21.58 | 17.16 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 24.07 | 16.81 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 20.75 | 16.72 |
| TraesCS6B01G067700.1 | Wheat | plastid | 18.26 | 16.42 |
| HORVU2Hr1G077990.2 | Barley | plastid | 25.31 | 16.31 |
| Os08t0193500-00 | Rice | cytosol | 14.11 | 15.53 |
| TraesCS6B01G310200.1 | Wheat | plastid | 23.24 | 15.51 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 27.8 | 15.3 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 28.22 | 15.28 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 29.88 | 15.22 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 29.46 | 15.17 |
| TraesCS3B01G452300.1 | Wheat | plastid | 29.05 | 15.05 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 26.97 | 15.05 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 24.48 | 14.9 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 29.05 | 14.77 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 29.88 | 14.52 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 27.8 | 14.26 |
| Os11t0637300-00 | Rice | cytosol | 7.05 | 14.17 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 6.22 | 14.15 |
| TraesCS6A01G051000.1 | Wheat | plastid | 21.58 | 13.98 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 10.79 | 13.47 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 5.81 | 13.33 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 21.16 | 13.04 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 14.52 | 12.96 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 4.98 | 12.12 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 16.6 | 10.78 |
| Os08t0193200-00 | Rice | cytosol | 4.98 | 10.43 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 12.86 | 10.26 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 9.96 | 9.6 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 4.15 | 7.04 |
| OQU80174 | Sorghum | cytosol | 2.9 | 5.22 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 2.49 | 5.08 |
| Os08t0196200-01 | Rice | cytosol | 1.66 | 1.46 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 0.41 | 0.26 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:835324 | ProteinID:AED96219.1 | ArrayExpress:AT5G52480 | EnsemblPlantsGene:AT5G52480 |
| RefSeq:AT5G52480 | TAIR:AT5G52480 | RefSeq:AT5G52480-TAIR-G | EnsemblPlants:AT5G52480.1 | TAIR:AT5G52480.1 | Unigene:At.29614 |
| ProteinID:BAB10545.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | RefSeq:NP_200061.3 | PFAM:PF13516 | PANTHER:PTHR44078 |
| PANTHER:PTHR44078:SF5 | UniProt:Q9FHB4 | SUPFAM:SSF52047 | UniParc:UPI00000A9345 | SEG:seg | : |
Description
Nodulin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FHB4]
Coordinates
chr5:-:21296833..21297858
Molecular Weight (calculated)
27288.8 Da
IEP (calculated)
4.895
GRAVY (calculated)
-0.200
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MRILSYNKPV LVNNPEAICR NAVDRSEGGL LEINIGDFGS DSLLTYIAER SSNLRSLRLM CSEITDDGFV QAVVKLPMLE ELEVSGISLS GESMKLAGLS
101: CPNLKTLMLN RLFYLSSDDD DHDAIAIAES MPKLRHLQLC GNKLTKTGLN AILDGCPHLE HLDLRQCINL VGNLEKRCFE KIKDLRRHND STSADYPFSF
201: ETYYFHWSRQ LAILKNALPM EEGAYNFDPI VEEAEYYLKL Y
101: CPNLKTLMLN RLFYLSSDDD DHDAIAIAES MPKLRHLQLC GNKLTKTGLN AILDGCPHLE HLDLRQCINL VGNLEKRCFE KIKDLRRHND STSADYPFSF
201: ETYYFHWSRQ LAILKNALPM EEGAYNFDPI VEEAEYYLKL Y
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.