Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77948 | Canola | cytosol | 58.98 | 89.35 |
| CDY21988 | Canola | cytosol | 33.2 | 56.29 |
| CDY48578 | Canola | cytosol | 50.0 | 51.0 |
| AT4G03630.1 | Thale cress | cytosol | 41.8 | 48.64 |
| CDX99649 | Canola | cytosol | 43.75 | 48.07 |
| CDY15937 | Canola | cytosol | 43.36 | 47.64 |
| CDY48574 | Canola | cytosol | 54.69 | 46.98 |
| CDY15618 | Canola | cytosol | 51.17 | 46.62 |
| CDX90789 | Canola | cytosol | 54.69 | 46.51 |
| CDY21333 | Canola | nucleus, plastid | 53.12 | 46.26 |
| CDY48580 | Canola | cytosol | 55.08 | 45.93 |
| CDX86473 | Canola | cytosol | 45.31 | 45.31 |
| CDY59275 | Canola | plastid | 56.64 | 45.17 |
| CDY48577 | Canola | cytosol | 49.61 | 45.04 |
| CDY09910 | Canola | nucleus | 56.25 | 45.0 |
| AT5G52480.1 | Thale cress | cytosol | 41.8 | 44.4 |
| CDY48575 | Canola | plastid | 54.69 | 44.16 |
| CDY48576 | Canola | cytosol | 51.17 | 44.11 |
| CDY21989 | Canola | cytosol | 13.67 | 43.21 |
| CDY21986 | Canola | cytosol, plastid | 50.0 | 42.67 |
| CDY62000 | Canola | plastid | 54.69 | 42.55 |
| CDY10283 | Canola | cytosol | 51.17 | 41.72 |
| CDY21990 | Canola | cytosol | 30.86 | 41.15 |
| CDY06267 | Canola | nucleus | 54.3 | 39.94 |
| PGSC0003DMT400058969 | Potato | cytosol | 13.67 | 39.33 |
| KRH21099 | Soybean | cytosol | 45.31 | 37.3 |
| KRH11147 | Soybean | cytosol | 45.31 | 36.48 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 45.7 | 36.45 |
| PGSC0003DMT400016134 | Potato | cytosol | 41.02 | 36.21 |
| Solyc08g013800.2.1 | Tomato | cytosol | 41.41 | 36.05 |
| Solyc08g013780.1.1 | Tomato | cytosol | 17.19 | 35.77 |
| PGSC0003DMT400052833 | Potato | cytosol | 38.28 | 35.64 |
| PGSC0003DMT400015035 | Potato | cytosol | 41.8 | 34.97 |
| PGSC0003DMT400015030 | Potato | cytosol | 40.23 | 34.8 |
| Solyc08g006940.2.1 | Tomato | cytosol | 41.02 | 33.76 |
| PGSC0003DMT400090939 | Potato | cytosol | 39.06 | 33.0 |
| KXG24675 | Sorghum | cytosol | 36.72 | 32.64 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 33.98 | 32.58 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 32.81 | 32.56 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 21.09 | 32.53 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 13.28 | 32.38 |
| PGSC0003DMT400054358 | Potato | cytosol | 41.8 | 31.56 |
| Zm00001d024252_P001 | Maize | cytosol | 31.64 | 30.68 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 37.89 | 29.57 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 23.44 | 29.56 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 37.11 | 29.32 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 37.5 | 29.27 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 23.44 | 29.27 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 12.11 | 29.25 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 33.2 | 29.21 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 23.05 | 29.21 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 37.5 | 29.09 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 23.44 | 28.85 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 33.2 | 28.81 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 34.38 | 28.76 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 34.38 | 28.76 |
| Os08t0193200-00 | Rice | cytosol | 12.89 | 28.7 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 19.14 | 28.49 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 35.94 | 28.4 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 10.94 | 28.28 |
| Solyc08g013820.2.1 | Tomato | cytosol | 41.02 | 28.23 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 33.2 | 28.15 |
| CDY21983 | Canola | cytosol | 30.86 | 27.92 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 18.75 | 27.91 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 34.77 | 27.81 |
| Os02t0317300-01 | Rice | cytosol | 35.55 | 27.74 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 21.88 | 27.59 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 21.88 | 27.59 |
| Zm00001d010914_P001 | Maize | cytosol | 35.16 | 27.52 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 33.2 | 27.51 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 31.25 | 27.49 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 34.77 | 27.47 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 32.42 | 27.12 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 36.72 | 26.86 |
| Os08t0194350-00 | Rice | cytosol | 27.73 | 26.69 |
| Zm00001d024265_P001 | Maize | cytosol | 31.25 | 26.67 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 24.22 | 26.61 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 36.33 | 26.57 |
| TraesCS2B01G178700.1 | Wheat | plastid | 32.03 | 26.54 |
| TraesCS2D01G159000.1 | Wheat | plastid | 32.03 | 26.54 |
| EES14679 | Sorghum | nucleus | 35.55 | 26.45 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 31.64 | 26.3 |
| EES17669 | Sorghum | cytosol | 33.98 | 26.2 |
| KXG24670 | Sorghum | cytosol | 32.42 | 26.18 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 31.64 | 26.05 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 35.16 | 26.01 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 35.55 | 26.0 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 31.25 | 25.97 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 34.38 | 25.96 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 31.64 | 25.88 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 34.77 | 25.8 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 33.98 | 25.66 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 31.25 | 25.56 |
| Os02t0317500-01 | Rice | cytosol | 32.81 | 25.45 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 22.27 | 25.45 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 34.38 | 25.43 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 11.72 | 25.42 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 29.69 | 25.25 |
| CDY09154 | Canola | plastid | 55.86 | 25.22 |
| CDY22112 | Canola | cytosol | 47.27 | 25.1 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 30.08 | 24.84 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 30.47 | 24.68 |
| Os11t0637300-00 | Rice | cytosol | 11.33 | 24.17 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 30.08 | 23.99 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 30.08 | 23.84 |
| Os08t0193500-00 | Rice | cytosol | 20.31 | 23.74 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 20.7 | 23.66 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 30.47 | 23.64 |
| OQU80048 | Sorghum | cytosol | 26.17 | 23.51 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 31.64 | 23.41 |
| OQU80176 | Sorghum | mitochondrion | 20.31 | 23.32 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 30.47 | 23.28 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 28.91 | 23.27 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 30.47 | 22.87 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 17.19 | 22.8 |
| Zm00001d024764_P001 | Maize | cytosol | 31.64 | 22.69 |
| Zm00001d046526_P001 | Maize | plastid | 24.61 | 22.26 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 30.08 | 22.13 |
| TraesCS6B01G067700.1 | Wheat | plastid | 23.05 | 22.01 |
| TraesCS7D01G203600.1 | Wheat | plastid | 28.91 | 21.7 |
| OQU80174 | Sorghum | cytosol | 11.33 | 21.64 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 18.75 | 21.62 |
| TraesCS7D01G203500.1 | Wheat | plastid | 28.52 | 21.47 |
| Os08t0193900-01 | Rice | nucleus | 33.2 | 21.46 |
| Os08t0193300-00 | Rice | cytosol | 27.73 | 21.32 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 11.72 | 21.13 |
| HORVU2Hr1G077990.2 | Barley | plastid | 30.86 | 21.12 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 28.12 | 20.93 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 22.66 | 20.64 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 27.73 | 20.64 |
| Os08t0191300-00 | Rice | cytosol, golgi | 20.7 | 20.62 |
| TraesCS6B01G310200.1 | Wheat | plastid | 28.12 | 19.94 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 33.59 | 19.91 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 16.41 | 19.72 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 22.66 | 19.14 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 32.42 | 18.95 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 25.39 | 18.84 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 25.0 | 18.77 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 32.42 | 18.65 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 25.39 | 18.41 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 33.59 | 18.3 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 21.48 | 18.21 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 25.0 | 18.08 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 24.61 | 18.0 |
| TraesCS3B01G452300.1 | Wheat | plastid | 32.42 | 17.85 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 32.81 | 17.76 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 32.42 | 17.73 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 32.81 | 17.72 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 16.8 | 17.7 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 16.8 | 17.2 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 26.17 | 16.92 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 17.58 | 16.67 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 32.03 | 16.53 |
| TraesCS6A01G051000.1 | Wheat | plastid | 23.83 | 16.4 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 25.0 | 16.37 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 18.75 | 16.05 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 22.27 | 15.36 |
| Os08t0196200-01 | Rice | cytosol | 10.16 | 9.49 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 0.39 | 0.26 |
Protein Annotations
| EnsemblPlants:CDX73787 | EnsemblPlantsGene:GSBRNA2T00109406001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR44078 |
| PANTHER:PTHR44078:SF5 | PFAM:PF12937 | PFscan:PS50181 | ProteinID:CDX73787 | ProteinID:CDX73787.1 | SMART:SM00256 |
| SMART:SM00367 | SUPFAM:SSF52047 | UniParc:UPI0004EEF98D | MapMan:35.1 | : | : |
Description
BnaC08g22160D
Coordinates
chrLK031799:+:2740134..2740990
Molecular Weight (calculated)
29201.3 Da
IEP (calculated)
6.835
GRAVY (calculated)
-0.255
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKDGRYWAG LPPELTWSIL SHLGTVDILE KAQKVCKSWH SVCKEPSMWR KINMHNDLGF MDFLTRSRHV AMCRNAVDRS QGGLVEIDIW YFGTDSLLNH
101: ISDSSRNLRT LRIAMCHEVN DGLLQAAGKL PFLEELDISY CSFEEETLKA VGKSCPNLKT LKLNYPVLSY SDDEFAIAIA GSMPELRNLQ LSGNPYMSNR
201: GLRAILDGCL HLEHLDLREC WRLDLVGDLE KLCAERIRVL RRPGDPTSGP HHMFWL
101: ISDSSRNLRT LRIAMCHEVN DGLLQAAGKL PFLEELDISY CSFEEETLKA VGKSCPNLKT LKLNYPVLSY SDDEFAIAIA GSMPELRNLQ LSGNPYMSNR
201: GLRAILDGCL HLEHLDLREC WRLDLVGDLE KLCAERIRVL RRPGDPTSGP HHMFWL
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.