Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21988 | Canola | cytosol | 37.58 | 74.17 |
| CDY48578 | Canola | cytosol | 59.73 | 70.92 |
| CDY48580 | Canola | cytosol | 70.13 | 68.08 |
| CDY21333 | Canola | nucleus, plastid | 61.07 | 61.9 |
| CDY59275 | Canola | plastid | 66.11 | 61.37 |
| CDY48576 | Canola | cytosol | 58.05 | 58.25 |
| CDY21989 | Canola | cytosol | 15.77 | 58.02 |
| CDY21990 | Canola | cytosol | 37.25 | 57.81 |
| CDX90789 | Canola | cytosol | 58.39 | 57.81 |
| CDX99649 | Canola | cytosol | 44.97 | 57.51 |
| CDY15937 | Canola | cytosol | 44.97 | 57.51 |
| CDY48577 | Canola | cytosol | 53.69 | 56.74 |
| CDY09910 | Canola | nucleus | 60.4 | 56.25 |
| CDY21986 | Canola | cytosol, plastid | 56.38 | 56.0 |
| CDX73787 | Canola | cytosol | 46.98 | 54.69 |
| CDY15618 | Canola | cytosol | 51.34 | 54.45 |
| CDY62000 | Canola | plastid | 60.07 | 54.41 |
| CDY48575 | Canola | plastid | 57.72 | 54.26 |
| CDX77948 | Canola | cytosol | 30.54 | 53.85 |
| CDX86473 | Canola | cytosol | 45.64 | 53.12 |
| CDY10283 | Canola | cytosol | 54.7 | 51.91 |
| CDY06267 | Canola | nucleus | 59.4 | 50.86 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 47.65 | 44.24 |
| KRH21099 | Soybean | cytosol | 45.64 | 43.73 |
| PGSC0003DMT400058969 | Potato | cytosol | 12.42 | 41.57 |
| KRH11147 | Soybean | cytosol | 44.3 | 41.51 |
| PGSC0003DMT400052833 | Potato | cytosol | 37.25 | 40.36 |
| PGSC0003DMT400016134 | Potato | cytosol | 38.93 | 40.0 |
| Solyc08g013800.2.1 | Tomato | cytosol | 39.26 | 39.8 |
| Solyc08g006940.2.1 | Tomato | cytosol | 41.28 | 39.55 |
| CDY21983 | Canola | cytosol | 36.24 | 38.16 |
| PGSC0003DMT400090939 | Potato | cytosol | 38.59 | 37.95 |
| PGSC0003DMT400015035 | Potato | cytosol | 38.59 | 37.58 |
| PGSC0003DMT400015030 | Potato | cytosol | 37.25 | 37.5 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 31.54 | 36.43 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 32.21 | 35.96 |
| PGSC0003DMT400054358 | Potato | cytosol | 40.6 | 35.69 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 12.42 | 35.24 |
| Solyc08g013780.1.1 | Tomato | cytosol | 14.43 | 34.96 |
| CDY09154 | Canola | plastid | 64.77 | 34.04 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 18.79 | 33.73 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 37.92 | 32.75 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 35.91 | 32.62 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 35.57 | 32.32 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 34.56 | 31.79 |
| CDY22112 | Canola | cytosol | 51.01 | 31.54 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 21.48 | 31.53 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 36.91 | 31.43 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 18.12 | 31.4 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 24.5 | 31.33 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 36.58 | 31.14 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 11.07 | 31.13 |
| Os02t0317300-01 | Rice | cytosol | 34.23 | 31.1 |
| Zm00001d024252_P001 | Maize | cytosol | 27.52 | 31.06 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 30.2 | 30.93 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 35.91 | 30.92 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 34.23 | 30.91 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 30.54 | 30.85 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 17.79 | 30.81 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 31.54 | 30.72 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 31.54 | 30.72 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 31.54 | 30.72 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 20.81 | 30.69 |
| Solyc08g013820.2.1 | Tomato | cytosol | 38.26 | 30.65 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 35.57 | 30.64 |
| Zm00001d010914_P001 | Maize | cytosol | 33.56 | 30.58 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 35.91 | 30.57 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 32.89 | 30.25 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 20.81 | 30.24 |
| EES17669 | Sorghum | cytosol | 33.56 | 30.12 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 34.23 | 30.09 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 20.47 | 30.05 |
| Zm00001d024265_P001 | Maize | cytosol | 30.2 | 30.0 |
| Os08t0194350-00 | Rice | cytosol | 26.51 | 29.7 |
| EES14679 | Sorghum | nucleus | 34.23 | 29.65 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 20.13 | 29.56 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 30.54 | 29.55 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 31.88 | 29.41 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 31.88 | 29.32 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 29.53 | 29.24 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 30.2 | 29.22 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 28.52 | 29.21 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 30.2 | 29.13 |
| Os02t0317500-01 | Rice | cytosol | 32.21 | 29.09 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 31.21 | 29.06 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 29.87 | 28.71 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 33.22 | 28.61 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 30.2 | 28.48 |
| TraesCS2B01G178700.1 | Wheat | plastid | 29.53 | 28.48 |
| KXG24675 | Sorghum | cytosol | 27.52 | 28.47 |
| KXG24670 | Sorghum | cytosol | 30.2 | 28.39 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 21.14 | 28.38 |
| TraesCS2D01G159000.1 | Wheat | plastid | 29.19 | 28.16 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 32.21 | 28.15 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 28.52 | 28.15 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 21.14 | 28.12 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 31.88 | 28.02 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 29.19 | 27.97 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 19.46 | 27.88 |
| Os08t0193500-00 | Rice | cytosol | 20.47 | 27.85 |
| OQU80176 | Sorghum | mitochondrion | 20.81 | 27.8 |
| Zm00001d046526_P001 | Maize | plastid | 26.17 | 27.56 |
| Os11t0637300-00 | Rice | cytosol | 11.07 | 27.5 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 28.86 | 27.48 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 28.86 | 27.48 |
| Os08t0193200-00 | Rice | cytosol | 10.4 | 26.96 |
| OQU80048 | Sorghum | cytosol | 25.17 | 26.32 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 8.72 | 26.26 |
| Zm00001d024764_P001 | Maize | cytosol | 31.21 | 26.05 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 19.13 | 25.45 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 28.86 | 25.0 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 16.11 | 24.87 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 26.51 | 24.61 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 9.73 | 24.58 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 23.15 | 24.56 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 26.17 | 24.53 |
| Os08t0193900-01 | Rice | nucleus | 32.55 | 24.49 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 28.19 | 24.42 |
| TraesCS6B01G067700.1 | Wheat | plastid | 21.48 | 23.88 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 26.51 | 23.58 |
| TraesCS7D01G203600.1 | Wheat | plastid | 26.85 | 23.46 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 25.84 | 23.33 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 11.07 | 23.24 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 16.44 | 23.0 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 26.85 | 22.99 |
| TraesCS7D01G203500.1 | Wheat | plastid | 26.17 | 22.94 |
| Os08t0193300-00 | Rice | cytosol | 25.5 | 22.82 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 23.15 | 22.77 |
| HORVU2Hr1G077990.2 | Barley | plastid | 28.19 | 22.46 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 32.55 | 22.45 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 26.17 | 22.1 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 25.84 | 22.0 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 25.17 | 21.99 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 17.79 | 21.81 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 25.84 | 21.75 |
| OQU80174 | Sorghum | cytosol | 9.73 | 21.64 |
| TraesCS6B01G310200.1 | Wheat | plastid | 25.84 | 21.33 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 33.22 | 21.06 |
| Os08t0191300-00 | Rice | cytosol, golgi | 18.12 | 21.01 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 24.16 | 20.87 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 29.87 | 20.0 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 20.13 | 19.87 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 29.19 | 19.86 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 26.17 | 19.7 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 16.44 | 19.6 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 30.2 | 19.23 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 25.17 | 19.18 |
| TraesCS3B01G452300.1 | Wheat | plastid | 29.87 | 19.14 |
| TraesCS6A01G051000.1 | Wheat | plastid | 23.49 | 18.82 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 29.53 | 18.6 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 28.86 | 18.14 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 29.87 | 17.94 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 16.11 | 17.78 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 17.79 | 17.73 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 20.13 | 16.17 |
| Os08t0196200-01 | Rice | cytosol | 9.4 | 10.22 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 1.01 | 0.79 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A078IGR7 | EnsemblPlants:CDY48574 | ProteinID:CDY48574 |
| ProteinID:CDY48574.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSBRNA2T00091310001 | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PFAM:PF12937 | PFscan:PS50181 |
| PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 | SMART:SM00256 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI0004EEF40F |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g01700DBnaA09g01700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGR7]
Coordinates
chrLK032779:+:115504..116472
Molecular Weight (calculated)
34387.7 Da
IEP (calculated)
4.573
GRAVY (calculated)
-0.454
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEDGKCINW EELPSEITSS ILRRLSSIDI LENAQKVCTS WRGVCKDPVM WRKIDMRNPR NLVLNLEMMC RHAVDRSQGG LAEIDIWHFG TDSLLNYIAD
101: RSSNLRSLRL AMCSSITDVG LTEALVKLPL LEDLEVSYCS LSAESLKVVG QSCPNLKTLK LNREGFNRFP YESDDDALAI AETMPRLGHL QLFGNKLTEG
201: GLNAILDNCL DLEHLDVRRC LNVYLFGDLK KRCSERVKVL RRPLDSIRGY PYEEAVNHMD TYEDLYADYY HESDSDYSEY DYDDYDYDDD FDPFKRSL
101: RSSNLRSLRL AMCSSITDVG LTEALVKLPL LEDLEVSYCS LSAESLKVVG QSCPNLKTLK LNREGFNRFP YESDDDALAI AETMPRLGHL QLFGNKLTEG
201: GLNAILDNCL DLEHLDVRRC LNVYLFGDLK KRCSERVKVL RRPLDSIRGY PYEEAVNHMD TYEDLYADYY HESDSDYSEY DYDDYDYDDD FDPFKRSL
001: MATSTTLQSL LMKEDEEQRN KRRTTSTMFL KKDDEERINW VDLPPELTTS ILLRLSVTDI LDNARKLCRA WRRICKDPSM WRKINLRDCL MYEFDFESMC
101: RHIVDLSQGG LLEINIEHFV SDSLLSYIVD RSCNLKSLGI SIYEPMTNKG VMNGIEKLPL LETLVIFHSS IKLDLKAIGH ACPQLKTLKL NSLGSELAHD
201: ISQVGYIPLL ECDDDALAIA ESMPKLRHLQ LMGNGLTNTG LNAILDGCPH LEEHLDVRKC FNINLVGNLE KRCMKRIKEL RRPHDSTADY PYSISVSMVV
301: QMMITSRYH
101: RHIVDLSQGG LLEINIEHFV SDSLLSYIVD RSCNLKSLGI SIYEPMTNKG VMNGIEKLPL LETLVIFHSS IKLDLKAIGH ACPQLKTLKL NSLGSELAHD
201: ISQVGYIPLL ECDDDALAIA ESMPKLRHLQ LMGNGLTNTG LNAILDGCPH LEEHLDVRKC FNINLVGNLE KRCMKRIKEL RRPHDSTADY PYSISVSMVV
301: QMMITSRYH
Arabidopsis Description
Putative F-box protein At4g05475 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.