Factsheet for Bra000817.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g013780.1.1	Tomato	cytosol	25.56	37.4
PGSC0003DMT400058969	Potato	cytosol	18.33	37.08
Bra000816.1-P	Field mustard	plastid	66.11	36.62
Bra034230.1-P	Field mustard	cytosol	51.67	35.36
Bra034226.1-P	Field mustard	cytosol	55.0	34.38
Bra034228.1-P	Field mustard	cytosol	56.11	34.01
Bra031582.1-P	Field mustard	nucleus	63.89	32.86
Bra034229.1-P	Field mustard	cytosol	48.89	31.88
Bra030690.1-P	Field mustard	cytosol	48.89	31.32
Bra000723.1-P	Field mustard	cytosol	26.11	30.92
Bra034227.1-P	Field mustard	plastid	54.44	30.82
Bra030342.1-P	Field mustard	cytosol	39.44	30.47
Bra034231.1-P	Field mustard	cytosol, plastid	43.33	30.12
KRH21099	Soybean	cytosol	50.0	28.94
TraesCS1A01G128000.1	Wheat	cytosol	35.56	27.47
VIT_10s0003g04300.t01	Wine grape	cytosol	47.78	26.79
KRH11147	Soybean	cytosol	46.67	26.42
TraesCS7A01G304900.1	Wheat	mitochondrion, nucleus	37.78	25.47
Solyc08g006940.2.1	Tomato	cytosol	43.89	25.4
TraesCS3B01G443100.1	Wheat	cytosol	35.0	24.42
OQU80176	Sorghum	mitochondrion	30.0	24.22
Solyc08g013800.2.1	Tomato	cytosol	39.44	24.15
PGSC0003DMT400015035	Potato	cytosol	40.56	23.86
PGSC0003DMT400090939	Potato	cytosol	39.44	23.43
TraesCS1D01G126200.1	Wheat	nucleus	37.78	23.37
PGSC0003DMT400052833	Potato	cytosol	35.56	23.27
TraesCS5D01G088900.1	Wheat	cytosol	38.89	22.88
TraesCS3B01G443800.1	Wheat	nucleus	43.33	22.61
PGSC0003DMT400016134	Potato	cytosol	36.11	22.41
TraesCS4B01G183700.1	Wheat	cytosol	36.67	22.37
TraesCS5A01G075400.1	Wheat	cytosol	37.78	22.22
PGSC0003DMT400015030	Potato	cytosol	36.11	21.96
TraesCS2A01G313400.1	Wheat	cytosol	37.78	21.86
HORVU2Hr1G020540.2	Barley	cytosol	33.89	21.71
TraesCS2B01G332200.1	Wheat	cytosol	37.22	21.41
TraesCS2D01G311900.1	Wheat	cytosol	37.22	21.41
TraesCS7D01G300400.1	Wheat	mitochondrion, nucleus	40.56	21.1
EES14679	Sorghum	nucleus	40.0	20.93
Os02t0317500-01	Rice	cytosol	38.33	20.91
Zm00001d024252_P001	Maize	cytosol	30.56	20.83
TraesCS7B01G205200.1	Wheat	mitochondrion	40.0	20.81
Os08t0194350-00	Rice	cytosol	30.56	20.68
HORVU6Hr1G014660.1	Barley	cytosol	24.44	20.66
HORVU5Hr1G020150.1	Barley	mitochondrion	38.89	20.65
TraesCS4B01G183800.1	Wheat	cytosol	35.0	20.59
TraesCS3A01G410700.1	Wheat	mitochondrion	40.0	20.57
TraesCS7B01G098400.1	Wheat	cytosol	35.0	20.45
TraesCS2D01G011000.1	Wheat	cytosol	36.11	20.44
HORVU0Hr1G019800.1	Barley	cytosol	35.0	20.32
TraesCS3B01G444000.1	Wheat	nucleus	39.44	20.29
TraesCS3D01G405300.1	Wheat	nucleus	39.44	20.29
Solyc08g013820.2.1	Tomato	cytosol	41.67	20.16
TraesCS7A01G193100.1	Wheat	cytosol	34.44	20.13
EES17669	Sorghum	cytosol	36.67	19.88
Zm00001d010914_P001	Maize	cytosol	36.11	19.88
TraesCS3A01G411000.1	Wheat	nucleus	37.22	19.76
Bra034194.1-P	Field mustard	cytosol	58.33	19.63
TraesCS7D01G194400.1	Wheat	extracellular	34.44	19.62
TraesCS7D01G194300.1	Wheat	cytosol	32.78	19.6
Os02t0317300-01	Rice	cytosol	35.56	19.51
Os08t0195800-00	Rice	cytosol, mitochondrion, nucleus	37.22	19.36
HORVU1Hr1G004970.3	Barley	cytosol	34.44	19.14
Bra020205.1-P	Field mustard	plastid	60.0	19.05
Zm00001d024265_P001	Maize	cytosol	31.67	19.0
OQU80048	Sorghum	cytosol	30.0	18.95
Zm00001d046527_P001	Maize	extracellular, mitochondrion, nucleus	23.33	18.92
TraesCS7B01G287400.1	Wheat	cytosol	33.89	18.89
PGSC0003DMT400054358	Potato	cytosol	35.56	18.88
TraesCS2D01G070200.1	Wheat	cytosol	33.33	18.52
TraesCS1A01G033100.1	Wheat	cytosol	33.33	18.29
TraesCS1D01G034100.1	Wheat	cytosol	33.33	18.29
Os08t0191300-00	Rice	cytosol, golgi	26.11	18.29
TraesCS2B01G085200.1	Wheat	cytosol	32.78	18.21
Zm00001d024764_P001	Maize	cytosol	36.11	18.21
Solyc08g006920.1.1	Tomato	cytosol, mitochondrion, nucleus	30.56	18.15
TraesCS5B01G081700.1	Wheat	cytosol	16.67	18.07
KXG24675	Sorghum	cytosol	28.89	18.06
KXG24670	Sorghum	cytosol	31.67	17.98
Os08t0193900-01	Rice	nucleus	39.44	17.93
TraesCS7D01G381100.1	Wheat	mitochondrion	33.89	17.89
TraesCS2B01G085400.1	Wheat	cytosol	31.67	17.81
Zm00001d046526_P001	Maize	plastid	27.78	17.67
HORVU2Hr1G077990.2	Barley	plastid	36.67	17.65
TraesCS1B01G041200.1	Wheat	cytosol	32.22	17.58
HORVU2Hr1G027710.1	Barley	cytosol	28.33	17.53
HORVU6Hr1G070690.2	Barley	extracellular, mitochondrion, plasma membrane	28.33	17.06
HORVU2Hr1G027770.2	Barley	mitochondrion	28.33	16.89
TraesCS2B01G178700.1	Wheat	plastid	28.89	16.83
TraesCS5A01G471800.1	Wheat	cytosol	18.89	16.75
TraesCS2A01G153600.1	Wheat	cytosol, plastid	28.33	16.5
TraesCS2D01G159000.1	Wheat	plastid	28.33	16.5
TraesCS6B01G067700.1	Wheat	plastid	24.44	16.42
TraesCS5D01G484300.1	Wheat	cytosol	18.33	16.26
TraesCS6B01G067500.1	Wheat	cytosol, extracellular	21.67	16.05
TraesCS7B01G480000.1	Wheat	cytosol	28.33	15.89
TraesCS6B01G310200.1	Wheat	plastid	31.67	15.79
TraesCS5B01G484300.1	Wheat	cytosol	17.78	15.76
Os08t0193300-00	Rice	cytosol	28.89	15.62
TraesCS7D01G555100.1	Wheat	cytosol	28.89	15.52
TraesCS2A01G119000.1	Wheat	nucleus	36.67	15.28
TraesCS3D01G413100.1	Wheat	cytosol, endoplasmic reticulum, vacuole	29.44	15.23
TraesCS5B01G284300.1	Wheat	cytosol	28.89	15.12
TraesCS5D01G292400.1	Wheat	cytosol	28.89	15.12
TraesCS7D01G203500.1	Wheat	plastid	28.33	15.0
TraesCS6A01G089600.1	Wheat	cytosol, mitochondrion	28.33	14.96
TraesCS5B01G484600.1	Wheat	cytosol	17.22	14.9
EES14677	Sorghum	cytosol, mitochondrion, nucleus, plastid	38.89	14.89
TraesCS5D01G468200.1	Wheat	cytosol, plasma membrane, plastid	16.67	14.85
TraesCS7D01G203600.1	Wheat	plastid	27.78	14.66
HORVU6Hr1G070700.2	Barley	mitochondrion	32.22	14.65
TraesCS6B01G112100.1	Wheat	mitochondrion	28.33	14.57
TraesCS6A01G090000.1	Wheat	mitochondrion	28.33	14.45
TraesCS3B01G452600.1	Wheat	extracellular	26.11	14.24
TraesCS5B01G484500.1	Wheat	cytosol	16.11	14.15
TraesCSU01G016500.1	Wheat	mitochondrion	27.78	14.12
TraesCS5D01G100900.1	Wheat	endoplasmic reticulum	13.33	13.95
TraesCS6B01G112000.1	Wheat	mitochondrion	26.11	13.62
TraesCS5B01G484100.1	Wheat	cytosol	16.67	13.39
TraesCS5B01G094800.1	Wheat	endoplasmic reticulum	12.78	13.37
TraesCS2B01G385500.1	Wheat	cytosol, plasma membrane, plastid	15.56	12.5
TraesCS6A01G051000.1	Wheat	plastid	25.56	12.37
TraesCS3D01G412900.1	Wheat	cytosol, plastid	31.11	11.97
TraesCS3B01G452300.1	Wheat	plastid	30.56	11.83
TraesCS3D01G413000.1	Wheat	cytosol	28.33	11.64
HORVU3Hr1G092720.1	Barley	cytosol, mitochondrion, nucleus	30.56	11.6
TraesCS3A01G417400.1	Wheat	cytosol	31.67	11.49
TraesCS3B01G452400.1	Wheat	cytosol	28.33	11.46
TraesCS3B01G452500.1	Wheat	cytosol	29.44	11.21
Os08t0193500-00	Rice	cytosol	13.33	10.96
Os08t0195900-00	Rice	cytosol, mitochondrion, nucleus, plastid	16.67	9.93
TraesCS3A01G417500.1	Wheat	cytosol	20.56	9.46
TraesCSU01G016600.1	Wheat	mitochondrion	13.89	9.26
TraesCS5B01G484200.1	Wheat	cytosol, peroxisome, plastid	8.89	8.29
TraesCS5D01G484100.1	Wheat	cytosol	16.67	8.09
Os08t0195000-00	Rice	cytosol, peroxisome, plastid	10.0	7.2
TraesCS7A01G484100.1	Wheat	cytosol	3.33	6.06
TraesCS2A01G071400.1	Wheat	cytosol	2.22	3.77
Os08t0193200-00	Rice	cytosol	2.22	3.48
OQU80174	Sorghum	cytosol	2.22	2.99
TraesCS4D01G274100.1	Wheat	cytosol	2.22	2.82
Os11t0637300-00	Rice	cytosol	1.67	2.5
TraesCS5B01G466500.1	Wheat	extracellular	1.11	1.9
HORVU2Hr1G020470.1	Barley	mitochondrion	1.11	1.69
Os08t0194000-00	Rice	cytosol, vacuole	2.78	1.32
Os08t0196200-01	Rice	cytosol	1.67	1.09

Protein Annotations

EnsemblPlants:Bra000817.1	EnsemblPlants:Bra000817.1-P	EnsemblPlantsGene:Bra000817	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf
PANTHER:PTHR44078	PANTHER:PTHR44078:SF5	SEG:seg	SUPFAM:SSF52047	UniParc:UPI000254051B	UniProt:M4C9D8
MapMan:35.1	:	:	:	:	:

Description

AT4G05460 (E=2e-044) | F-box family protein (FBL20)

Coordinates

chrA03:-:13327648..13328853

Molecular Weight (calculated)

19808.0 Da

IEP (calculated)

9.252

GRAVY (calculated)

-0.153

Length

180 amino acids

Sequence
(BLAST)

001: MASSSSSSLV PSSSSLKSLS LKSSNLTSLK LAKCYFITDY GFSQAVVKLP LLEDLEVSYC SLTKVSMKAV GKPCPNLKTL KLNIFGDMFP GNKSDDEALA
101: IAETMLGLRH LQLFGSKLSN TGLKAILDNC PNLEHLDLRQ CFNVNLFGDM KKRCSERIKV VRHPNASTHD YHIDAKYGSR

Best Arabidopsis Sequence Match ( AT4G03630.1 )
(BLAST)

001: MNNEDFNADE LLTFVAYRSS ILKRLGRMMC HAVALSQGGC VEINIEHFGT DSLLTYIADR SSNLRHLGLA KCDQITGMGL FTEAMKLPLL EDLELSYCLI
101: KGKNLEAIGF ACLHLKTLKL NCQGFKFPGF TYDHDALGIA KRMPELRCLQ LFGNRVSDVG LNAIFDGCPH LEHLDLRQCF NINLVGDLEK RCMERIKDLR
201: RPNDSTADYP YDTSLLDLGI

Arabidopsis Description

Putative nodulin [Source:UniProtKB/TrEMBL;Acc:Q9SY41]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.