Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034230.1-P | Field mustard | cytosol | 67.36 | 73.76 |
| Bra034231.1-P | Field mustard | cytosol, plastid | 55.9 | 62.16 |
| Bra034229.1-P | Field mustard | cytosol | 57.29 | 59.78 |
| Bra034228.1-P | Field mustard | cytosol | 57.64 | 55.89 |
| Bra000816.1-P | Field mustard | plastid | 62.5 | 55.38 |
| Bra000817.1-P | Field mustard | plastid | 34.38 | 55.0 |
| Bra030690.1-P | Field mustard | cytosol | 52.08 | 53.38 |
| Bra030342.1-P | Field mustard | cytosol | 42.36 | 52.36 |
| Bra031582.1-P | Field mustard | nucleus | 61.81 | 50.86 |
| Bra034227.1-P | Field mustard | plastid | 55.56 | 50.31 |
| Bra000723.1-P | Field mustard | cytosol | 24.65 | 46.71 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 47.92 | 42.99 |
| KRH21099 | Soybean | cytosol | 46.18 | 42.77 |
| PGSC0003DMT400058969 | Potato | cytosol | 13.19 | 42.7 |
| KRH11147 | Soybean | cytosol | 46.53 | 42.14 |
| PGSC0003DMT400016134 | Potato | cytosol | 40.97 | 40.69 |
| PGSC0003DMT400052833 | Potato | cytosol | 37.85 | 39.64 |
| Solyc08g013800.2.1 | Tomato | cytosol | 39.93 | 39.12 |
| Solyc08g013780.1.1 | Tomato | cytosol | 16.67 | 39.02 |
| Solyc08g006940.2.1 | Tomato | cytosol | 40.62 | 37.62 |
| PGSC0003DMT400090939 | Potato | cytosol | 39.24 | 37.29 |
| PGSC0003DMT400015035 | Potato | cytosol | 39.58 | 37.25 |
| PGSC0003DMT400015030 | Potato | cytosol | 37.15 | 36.15 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 32.29 | 36.05 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 32.99 | 35.58 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 12.85 | 35.24 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 19.79 | 34.34 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 20.14 | 33.72 |
| Bra034194.1-P | Field mustard | cytosol | 62.5 | 33.64 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 23.61 | 33.5 |
| PGSC0003DMT400054358 | Potato | cytosol | 39.24 | 33.33 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 19.79 | 33.14 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 22.92 | 32.67 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 22.57 | 32.02 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 22.57 | 32.02 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 36.11 | 31.71 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 36.11 | 31.71 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 35.42 | 31.48 |
| Zm00001d024252_P001 | Maize | cytosol | 28.82 | 31.44 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 33.33 | 31.37 |
| Bra020205.1-P | Field mustard | plastid | 61.46 | 31.22 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 11.46 | 31.13 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 32.99 | 31.05 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 34.72 | 30.86 |
| Os02t0317300-01 | Rice | cytosol | 35.07 | 30.79 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 36.81 | 30.72 |
| Solyc08g013820.2.1 | Tomato | cytosol | 39.24 | 30.38 |
| Zm00001d010914_P001 | Maize | cytosol | 34.38 | 30.28 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 21.53 | 30.24 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 30.56 | 30.24 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 30.9 | 30.17 |
| EES17669 | Sorghum | cytosol | 34.72 | 30.12 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 34.38 | 30.0 |
| KXG24675 | Sorghum | cytosol | 29.86 | 29.86 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 31.94 | 29.77 |
| TraesCS2D01G159000.1 | Wheat | plastid | 31.94 | 29.77 |
| Os02t0317500-01 | Rice | cytosol | 34.03 | 29.7 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 32.99 | 29.69 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 33.33 | 29.63 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 29.86 | 29.55 |
| TraesCS2B01G178700.1 | Wheat | plastid | 31.6 | 29.45 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 35.76 | 29.43 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 35.07 | 29.19 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 35.42 | 29.14 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 30.56 | 29.14 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 30.9 | 29.09 |
| EES14679 | Sorghum | nucleus | 34.72 | 29.07 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 22.57 | 29.02 |
| Os08t0194350-00 | Rice | cytosol | 26.74 | 28.95 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 34.72 | 28.9 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 34.72 | 28.9 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 35.07 | 28.86 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 32.29 | 28.79 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 33.68 | 28.61 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 22.92 | 28.33 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 33.33 | 28.32 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 30.21 | 27.97 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 29.86 | 27.92 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 20.14 | 27.88 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 32.99 | 27.86 |
| Os08t0193500-00 | Rice | cytosol | 21.18 | 27.85 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 29.86 | 27.74 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 29.51 | 27.6 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 28.82 | 27.57 |
| Zm00001d024265_P001 | Maize | cytosol | 28.47 | 27.33 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 29.51 | 27.16 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 29.51 | 27.16 |
| KXG24670 | Sorghum | cytosol | 29.86 | 27.13 |
| Os08t0193200-00 | Rice | cytosol | 10.76 | 26.96 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 29.51 | 26.9 |
| Os11t0637300-00 | Rice | cytosol | 11.11 | 26.67 |
| Zm00001d024764_P001 | Maize | cytosol | 32.64 | 26.33 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 10.76 | 26.27 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 28.47 | 25.55 |
| Zm00001d046526_P001 | Maize | plastid | 25.0 | 25.44 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 8.68 | 25.25 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 29.17 | 25.07 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 19.44 | 25.0 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 16.67 | 24.87 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 18.75 | 24.32 |
| Os08t0193900-01 | Rice | nucleus | 33.33 | 24.24 |
| OQU80048 | Sorghum | cytosol | 23.96 | 24.21 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 23.26 | 23.84 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 26.04 | 23.58 |
| TraesCS7D01G203600.1 | Wheat | plastid | 27.78 | 23.46 |
| TraesCS6B01G067700.1 | Wheat | plastid | 21.53 | 23.13 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 27.43 | 22.97 |
| OQU80176 | Sorghum | mitochondrion | 17.71 | 22.87 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 23.96 | 22.77 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 27.08 | 22.67 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 11.11 | 22.54 |
| TraesCS6B01G310200.1 | Wheat | plastid | 28.12 | 22.44 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 25.69 | 22.42 |
| OQU80174 | Sorghum | cytosol | 10.42 | 22.39 |
| TraesCS7D01G203500.1 | Wheat | plastid | 26.39 | 22.35 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 33.33 | 22.22 |
| HORVU2Hr1G077990.2 | Barley | plastid | 28.47 | 21.93 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 26.39 | 21.84 |
| Os08t0193300-00 | Rice | cytosol | 25.0 | 21.62 |
| Os08t0191300-00 | Rice | cytosol, golgi | 19.1 | 21.4 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 26.04 | 21.25 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 15.62 | 21.13 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 25.69 | 20.9 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 25.0 | 20.87 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 21.88 | 20.86 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 25.35 | 20.86 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 24.65 | 20.82 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 33.68 | 20.64 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 17.71 | 20.4 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 17.01 | 20.16 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 27.43 | 19.95 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 28.82 | 18.95 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 29.17 | 18.88 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 29.86 | 18.38 |
| TraesCS3B01G452300.1 | Wheat | plastid | 29.51 | 18.28 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 18.75 | 18.06 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 24.31 | 17.9 |
| TraesCS6A01G051000.1 | Wheat | plastid | 22.92 | 17.74 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 28.82 | 17.51 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 28.47 | 17.34 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 29.51 | 17.14 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 15.97 | 17.04 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 21.18 | 16.44 |
| Os08t0196200-01 | Rice | cytosol | 9.38 | 9.85 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 1.04 | 0.79 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | MapMan:35.1 | EnsemblPlantsGene:Bra034226 | EnsemblPlants:Bra034226.1 | EnsemblPlants:Bra034226.1-P |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | UniProt:M4EZI3 | PFAM:PF12937 | PFscan:PS50181 | PANTHER:PTHR44078 |
| PANTHER:PTHR44078:SF5 | SMART:SM00256 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI00025439F5 | SEG:seg |
Description
AT4G05460 (E=5e-090) | F-box family protein (FBL20)
Coordinates
chrA01:-:26841609..26842546
Molecular Weight (calculated)
32677.8 Da
IEP (calculated)
4.554
GRAVY (calculated)
-0.265
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEDGECITW ADLPSDLTSS ILRRLGSIDI FENAQRVCTS WRGVCKDPEM WRKIDMRNLG DVGFNLEIMC RHAVDRSQGG LVDIEIWHFA TDSLLNYIAD
101: SSSNLRSLKL VKCSPLTSEG LTEAIVKLPL LEELDVSYCS LSVESLKVVG QSLPNLKTLK LNRIYRRFAC RPYVSDDDAL AIAETMPRLS HLQLFANKLT
201: STGLNAILDN CPNLEHLDLR MCLNVTLLGD LKKRCSERIK VLIRPFDSFL DHPHDEAAIL TDSSDDHYND YYEDDDDSYD NDDVYGSF
101: SSSNLRSLKL VKCSPLTSEG LTEAIVKLPL LEELDVSYCS LSVESLKVVG QSLPNLKTLK LNRIYRRFAC RPYVSDDDAL AIAETMPRLS HLQLFANKLT
201: STGLNAILDN CPNLEHLDLR MCLNVTLLGD LKKRCSERIK VLIRPFDSFL DHPHDEAAIL TDSSDDHYND YYEDDDDSYD NDDVYGSF
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.