Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48577 | Canola | cytosol | 85.51 | 83.69 |
| Bra034230.1-P | Field mustard | cytosol | 58.33 | 61.22 |
| Bra034228.1-P | Field mustard | cytosol | 64.13 | 59.6 |
| Bra034226.1-P | Field mustard | cytosol | 59.78 | 57.29 |
| Bra034231.1-P | Field mustard | cytosol, plastid | 51.45 | 54.83 |
| Bra000816.1-P | Field mustard | plastid | 60.14 | 51.08 |
| Bra030342.1-P | Field mustard | cytosol | 43.12 | 51.07 |
| Bra000817.1-P | Field mustard | plastid | 31.88 | 48.89 |
| Bra034227.1-P | Field mustard | plastid | 54.71 | 47.48 |
| Bra030690.1-P | Field mustard | cytosol | 47.83 | 46.98 |
| Bra031582.1-P | Field mustard | nucleus | 56.52 | 44.57 |
| Bra000723.1-P | Field mustard | cytosol | 23.91 | 43.42 |
| PGSC0003DMT400016134 | Potato | cytosol | 40.94 | 38.97 |
| KRH21099 | Soybean | cytosol | 42.75 | 37.94 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 43.84 | 37.69 |
| PGSC0003DMT400015035 | Potato | cytosol | 41.3 | 37.25 |
| Solyc08g013800.2.1 | Tomato | cytosol | 39.49 | 37.07 |
| PGSC0003DMT400015030 | Potato | cytosol | 39.13 | 36.49 |
| KRH11147 | Soybean | cytosol | 42.03 | 36.48 |
| PGSC0003DMT400052833 | Potato | cytosol | 36.23 | 36.36 |
| PGSC0003DMT400058969 | Potato | cytosol | 11.59 | 35.96 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 34.42 | 35.58 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 32.25 | 34.5 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 20.29 | 33.73 |
| Bra034194.1-P | Field mustard | cytosol | 65.22 | 33.64 |
| Solyc08g013780.1.1 | Tomato | cytosol | 14.86 | 33.33 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 12.68 | 33.33 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 24.28 | 33.0 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 23.91 | 32.51 |
| Solyc08g006940.2.1 | Tomato | cytosol | 36.59 | 32.48 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 23.55 | 32.02 |
| PGSC0003DMT400090939 | Potato | cytosol | 35.14 | 32.01 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 23.19 | 31.68 |
| PGSC0003DMT400054358 | Potato | cytosol | 38.77 | 31.56 |
| Zm00001d024252_P001 | Maize | cytosol | 30.07 | 31.44 |
| Solyc08g013820.2.1 | Tomato | cytosol | 40.94 | 30.38 |
| Zm00001d010914_P001 | Maize | cytosol | 35.87 | 30.28 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 22.46 | 30.24 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 18.84 | 30.23 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 33.7 | 30.1 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 31.52 | 29.9 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 22.46 | 29.81 |
| TraesCS2B01G178700.1 | Wheat | plastid | 33.33 | 29.77 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 18.48 | 29.65 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 34.78 | 29.63 |
| Os02t0317300-01 | Rice | cytosol | 35.14 | 29.57 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 35.14 | 29.57 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 36.96 | 29.57 |
| EES17669 | Sorghum | cytosol | 35.51 | 29.52 |
| KXG24675 | Sorghum | cytosol | 30.8 | 29.51 |
| TraesCS2D01G159000.1 | Wheat | plastid | 32.97 | 29.45 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 35.14 | 29.39 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 34.78 | 29.27 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 31.16 | 29.15 |
| Bra020205.1-P | Field mustard | plastid | 59.78 | 29.1 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 23.55 | 29.02 |
| Os08t0194350-00 | Rice | cytosol | 27.9 | 28.95 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 36.23 | 28.9 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 30.43 | 28.87 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 31.52 | 28.81 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 31.88 | 28.76 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 31.88 | 28.76 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 10.87 | 28.3 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 10.14 | 28.28 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 35.14 | 28.03 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 35.51 | 28.0 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 35.51 | 28.0 |
| Os08t0193200-00 | Rice | cytosol | 11.59 | 27.83 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 35.14 | 27.71 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 31.16 | 27.65 |
| EES14679 | Sorghum | nucleus | 34.42 | 27.62 |
| Os02t0317500-01 | Rice | cytosol | 32.97 | 27.58 |
| Os11t0637300-00 | Rice | cytosol | 11.96 | 27.5 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 23.19 | 27.47 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 30.43 | 27.45 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 31.88 | 27.16 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 30.8 | 27.16 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 30.8 | 27.16 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 33.33 | 27.14 |
| Zm00001d024265_P001 | Maize | cytosol | 29.35 | 27.0 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 33.7 | 26.88 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 21.74 | 26.79 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 29.71 | 26.62 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 32.61 | 26.55 |
| KXG24670 | Sorghum | cytosol | 30.43 | 26.5 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 29.71 | 26.45 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 29.35 | 26.3 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 30.43 | 26.25 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 30.8 | 26.23 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 30.43 | 26.01 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 31.88 | 25.81 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 29.35 | 25.63 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 17.75 | 25.39 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 27.54 | 25.25 |
| TraesCS6B01G067700.1 | Wheat | plastid | 24.28 | 25.0 |
| Zm00001d024764_P001 | Maize | cytosol | 31.88 | 24.65 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 28.62 | 24.61 |
| Zm00001d046526_P001 | Maize | plastid | 25.0 | 24.38 |
| OQU80176 | Sorghum | mitochondrion | 19.57 | 24.22 |
| Os08t0193500-00 | Rice | cytosol | 19.2 | 24.2 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 27.54 | 23.9 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 28.99 | 23.88 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 19.2 | 23.87 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 10.14 | 23.73 |
| Os08t0193900-01 | Rice | nucleus | 32.97 | 22.98 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 28.62 | 22.97 |
| TraesCS7D01G203600.1 | Wheat | plastid | 28.26 | 22.87 |
| OQU80048 | Sorghum | cytosol | 23.55 | 22.81 |
| TraesCS6B01G310200.1 | Wheat | plastid | 29.71 | 22.71 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 28.26 | 22.67 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 22.83 | 22.42 |
| OQU80174 | Sorghum | cytosol | 10.87 | 22.39 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 28.62 | 22.38 |
| TraesCS7D01G203500.1 | Wheat | plastid | 27.54 | 22.35 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 28.62 | 22.32 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 28.26 | 22.29 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 26.45 | 22.12 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 27.54 | 21.84 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 26.45 | 21.41 |
| HORVU2Hr1G077990.2 | Barley | plastid | 28.99 | 21.39 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 33.33 | 21.3 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 10.87 | 21.13 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 23.19 | 21.12 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 15.94 | 20.66 |
| Os08t0191300-00 | Rice | cytosol, golgi | 19.2 | 20.62 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 25.72 | 20.58 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 28.99 | 20.2 |
| Os08t0193300-00 | Rice | cytosol | 24.28 | 20.12 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 32.97 | 19.36 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 17.03 | 19.34 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 20.65 | 18.87 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 17.03 | 18.8 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 30.8 | 18.16 |
| TraesCS3B01G452300.1 | Wheat | plastid | 30.43 | 18.06 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 28.62 | 18.04 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 17.39 | 17.78 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 28.62 | 17.75 |
| TraesCS6A01G051000.1 | Wheat | plastid | 23.91 | 17.74 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 19.2 | 17.73 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 30.43 | 17.72 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 29.71 | 17.34 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 30.8 | 17.14 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 24.28 | 17.14 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 22.1 | 16.44 |
| Os08t0196200-01 | Rice | cytosol | 10.14 | 10.22 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 1.81 | 1.32 |
Protein Annotations
| EnsemblPlants:Bra034229.1 | EnsemblPlants:Bra034229.1-P | EnsemblPlantsGene:Bra034229 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 | PFAM:PF12937 | PFscan:PS50181 | SMART:SM00256 | SUPFAM:SSF52047 |
| SUPFAM:SSF81383 | UniParc:UPI00025439F2 | UniProt:M4EZI6 | MapMan:35.1 | : | : |
Description
AT4G05460 (E=1e-075) | F-box family protein (FBL20)
Coordinates
chrA01:-:26834997..26835958
Molecular Weight (calculated)
31075.2 Da
IEP (calculated)
4.622
GRAVY (calculated)
-0.109
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSPSTPVM KEDGECRNWS ELPYELMASI LSRLDTFDIL ENAQKVCTSW HRVCKDPAMW RKIDFRYFGD KKYNLEIMCR HAVDLSQGGL LEIDISCFGT
101: DSLLNYIADR SSNLRSLELA LISVTTEGLA EAIGKLPSLE ELKITEFAMW GGYLKVVGQS CPKLKTLNLN CIRIGFDPPF YVSDDDALAI AETMHGLRFL
201: QLFSNGLTDA GLKAILDNCP DLEHLDLNHC FNVNFSGDLE KRCSERIKVL VRPGSPRIFD FSIFEDSVTL DSDHDL
101: DSLLNYIADR SSNLRSLELA LISVTTEGLA EAIGKLPSLE ELKITEFAMW GGYLKVVGQS CPKLKTLNLN CIRIGFDPPF YVSDDDALAI AETMHGLRFL
201: QLFSNGLTDA GLKAILDNCP DLEHLDLNHC FNVNFSGDLE KRCSERIKVL VRPGSPRIFD FSIFEDSVTL DSDHDL
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.