Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22112 | Canola | cytosol | 76.26 | 84.65 |
| Bra034229.1-P | Field mustard | cytosol | 33.64 | 65.22 |
| Bra034230.1-P | Field mustard | cytosol | 30.84 | 62.74 |
| Bra034226.1-P | Field mustard | cytosol | 33.64 | 62.5 |
| Bra034228.1-P | Field mustard | cytosol | 34.21 | 61.62 |
| Bra034231.1-P | Field mustard | cytosol, plastid | 29.35 | 60.62 |
| Bra000816.1-P | Field mustard | plastid | 36.07 | 59.38 |
| Bra000817.1-P | Field mustard | plastid | 19.63 | 58.33 |
| Bra030690.1-P | Field mustard | cytosol | 28.22 | 53.74 |
| Bra030342.1-P | Field mustard | cytosol | 23.36 | 53.65 |
| Bra031582.1-P | Field mustard | nucleus | 34.21 | 52.29 |
| Bra000723.1-P | Field mustard | cytosol | 14.21 | 50.0 |
| Bra034227.1-P | Field mustard | plastid | 29.53 | 49.69 |
| KRH21099 | Soybean | cytosol | 24.67 | 42.44 |
| VIT_10s0003g04300.t01 | Wine grape | cytosol | 24.67 | 41.12 |
| PGSC0003DMT400016134 | Potato | cytosol | 22.24 | 41.03 |
| KRH11147 | Soybean | cytosol | 24.3 | 40.88 |
| PGSC0003DMT400058969 | Potato | cytosol | 6.73 | 40.45 |
| PGSC0003DMT400052833 | Potato | cytosol | 20.19 | 39.27 |
| Solyc08g013800.2.1 | Tomato | cytosol | 20.93 | 38.1 |
| Solyc08g006940.2.1 | Tomato | cytosol | 22.06 | 37.94 |
| PGSC0003DMT400090939 | Potato | cytosol | 20.75 | 36.63 |
| Solyc08g013780.1.1 | Tomato | cytosol | 8.41 | 36.59 |
| PGSC0003DMT400015035 | Potato | cytosol | 20.75 | 36.27 |
| PGSC0003DMT400015030 | Potato | cytosol | 19.81 | 35.81 |
| TraesCS3B01G443100.1 | Wheat | cytosol | 17.2 | 35.66 |
| TraesCS7A01G304900.1 | Wheat | mitochondrion, nucleus | 17.76 | 35.58 |
| TraesCS5B01G081700.1 | Wheat | cytosol | 10.65 | 34.34 |
| TraesCS1A01G128000.1 | Wheat | cytosol | 14.77 | 33.91 |
| Bra020205.1-P | Field mustard | plastid | 35.7 | 33.69 |
| TraesCS1D01G126200.1 | Wheat | nucleus | 17.38 | 31.96 |
| PGSC0003DMT400054358 | Potato | cytosol | 20.19 | 31.86 |
| TraesCS3B01G443800.1 | Wheat | nucleus | 20.37 | 31.59 |
| TraesCS5A01G471800.1 | Wheat | cytosol | 11.96 | 31.53 |
| TraesCS5B01G484300.1 | Wheat | cytosol | 11.96 | 31.53 |
| TraesCS5D01G484300.1 | Wheat | cytosol | 11.96 | 31.53 |
| TraesCS5D01G088900.1 | Wheat | cytosol | 17.94 | 31.37 |
| TraesCS7B01G205200.1 | Wheat | mitochondrion | 20.19 | 31.21 |
| TraesCS5A01G075400.1 | Wheat | cytosol | 17.76 | 31.05 |
| Os08t0195800-00 | Rice | cytosol, mitochondrion, nucleus | 20.0 | 30.92 |
| TraesCS4B01G183700.1 | Wheat | cytosol | 17.01 | 30.85 |
| TraesCS5B01G094800.1 | Wheat | endoplasmic reticulum | 9.91 | 30.81 |
| TraesCS5D01G100900.1 | Wheat | endoplasmic reticulum | 9.91 | 30.81 |
| TraesCS5B01G484500.1 | Wheat | cytosol | 11.78 | 30.73 |
| TraesCS7D01G300400.1 | Wheat | mitochondrion, nucleus | 19.81 | 30.64 |
| TraesCS5B01G466500.1 | Wheat | extracellular | 5.98 | 30.48 |
| TraesCS4B01G183800.1 | Wheat | cytosol | 17.38 | 30.39 |
| Os02t0317500-01 | Rice | cytosol | 18.69 | 30.3 |
| Zm00001d024252_P001 | Maize | cytosol | 14.95 | 30.3 |
| TraesCS2A01G313400.1 | Wheat | cytosol | 17.57 | 30.23 |
| Os08t0194350-00 | Rice | cytosol | 14.95 | 30.08 |
| TraesCS2B01G332200.1 | Wheat | cytosol | 17.57 | 30.03 |
| EES14679 | Sorghum | nucleus | 19.25 | 29.94 |
| Solyc08g013820.2.1 | Tomato | cytosol | 20.75 | 29.84 |
| TraesCS3A01G410700.1 | Wheat | mitochondrion | 19.44 | 29.71 |
| TraesCS2D01G311900.1 | Wheat | cytosol | 17.38 | 29.71 |
| Zm00001d010914_P001 | Maize | cytosol | 18.13 | 29.66 |
| HORVU1Hr1G004970.3 | Barley | cytosol | 17.94 | 29.63 |
| Os02t0317300-01 | Rice | cytosol | 18.13 | 29.57 |
| HORVU2Hr1G027710.1 | Barley | cytosol | 16.07 | 29.55 |
| TraesCS3A01G411000.1 | Wheat | nucleus | 18.69 | 29.5 |
| TraesCS3B01G444000.1 | Wheat | nucleus | 19.25 | 29.43 |
| TraesCS3D01G405300.1 | Wheat | nucleus | 19.25 | 29.43 |
| TraesCS7B01G287400.1 | Wheat | cytosol | 17.76 | 29.41 |
| TraesCS5B01G484600.1 | Wheat | cytosol | 11.4 | 29.33 |
| TraesCS1A01G033100.1 | Wheat | cytosol | 17.94 | 29.27 |
| TraesCS1D01G034100.1 | Wheat | cytosol | 17.94 | 29.27 |
| TraesCS7B01G098400.1 | Wheat | cytosol | 16.82 | 29.22 |
| EES17669 | Sorghum | cytosol | 18.13 | 29.22 |
| TraesCS5D01G468200.1 | Wheat | cytosol, plasma membrane, plastid | 11.03 | 29.21 |
| TraesCS1B01G041200.1 | Wheat | cytosol | 17.94 | 29.09 |
| TraesCS7D01G381100.1 | Wheat | mitochondrion | 18.5 | 29.03 |
| TraesCS5B01G484100.1 | Wheat | cytosol | 12.15 | 29.02 |
| TraesCS7A01G193100.1 | Wheat | cytosol | 16.64 | 28.9 |
| HORVU0Hr1G019800.1 | Barley | cytosol | 16.64 | 28.71 |
| TraesCS7D01G194300.1 | Wheat | cytosol | 16.07 | 28.57 |
| HORVU2Hr1G027770.2 | Barley | mitochondrion | 16.07 | 28.48 |
| HORVU5Hr1G020150.1 | Barley | mitochondrion | 17.94 | 28.32 |
| TraesCS7A01G484100.1 | Wheat | cytosol | 5.23 | 28.28 |
| TraesCS7D01G194400.1 | Wheat | extracellular | 16.64 | 28.16 |
| TraesCS2A01G153600.1 | Wheat | cytosol, plastid | 16.26 | 28.16 |
| KXG24675 | Sorghum | cytosol | 15.14 | 28.12 |
| Zm00001d024265_P001 | Maize | cytosol | 15.7 | 28.0 |
| Zm00001d046526_P001 | Maize | plastid | 14.77 | 27.92 |
| TraesCS2B01G178700.1 | Wheat | plastid | 16.07 | 27.83 |
| Os08t0193200-00 | Rice | cytosol | 5.98 | 27.83 |
| TraesCS2D01G159000.1 | Wheat | plastid | 15.89 | 27.51 |
| Os11t0637300-00 | Rice | cytosol | 6.17 | 27.5 |
| TraesCS2A01G071400.1 | Wheat | cytosol | 5.42 | 27.36 |
| TraesCS2D01G070200.1 | Wheat | cytosol | 16.45 | 27.16 |
| KXG24670 | Sorghum | cytosol | 16.07 | 27.13 |
| OQU80176 | Sorghum | mitochondrion | 11.21 | 26.91 |
| TraesCS2B01G385500.1 | Wheat | cytosol, plasma membrane, plastid | 11.03 | 26.34 |
| OQU80048 | Sorghum | cytosol | 13.83 | 25.96 |
| TraesCS2B01G085200.1 | Wheat | cytosol | 15.7 | 25.93 |
| TraesCS7B01G480000.1 | Wheat | cytosol | 15.51 | 25.86 |
| Os08t0193900-01 | Rice | nucleus | 19.07 | 25.76 |
| Zm00001d046527_P001 | Maize | extracellular, mitochondrion, nucleus | 10.65 | 25.68 |
| TraesCS2B01G085400.1 | Wheat | cytosol | 15.33 | 25.62 |
| HORVU2Hr1G020540.2 | Barley | cytosol | 13.46 | 25.62 |
| Os08t0193500-00 | Rice | cytosol | 10.28 | 25.11 |
| Zm00001d024764_P001 | Maize | cytosol | 16.64 | 24.93 |
| TraesCS5B01G484200.1 | Wheat | cytosol, peroxisome, plastid | 8.97 | 24.87 |
| TraesCS7D01G555100.1 | Wheat | cytosol | 15.51 | 24.78 |
| TraesCS7D01G203500.1 | Wheat | plastid | 15.7 | 24.71 |
| TraesCS7D01G203600.1 | Wheat | plastid | 15.7 | 24.63 |
| TraesCS2D01G011000.1 | Wheat | cytosol | 14.39 | 24.21 |
| TraesCS4D01G274100.1 | Wheat | cytosol | 6.36 | 23.94 |
| OQU80174 | Sorghum | cytosol | 5.98 | 23.88 |
| TraesCS6B01G067700.1 | Wheat | plastid | 11.96 | 23.88 |
| TraesCS2A01G119000.1 | Wheat | nucleus | 19.07 | 23.61 |
| HORVU2Hr1G077990.2 | Barley | plastid | 16.45 | 23.53 |
| TraesCS6B01G112100.1 | Wheat | mitochondrion | 15.14 | 23.14 |
| TraesCS6B01G310200.1 | Wheat | plastid | 15.51 | 22.99 |
| TraesCS3D01G413100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 14.95 | 22.99 |
| TraesCS6A01G090000.1 | Wheat | mitochondrion | 15.14 | 22.95 |
| HORVU2Hr1G020470.1 | Barley | mitochondrion | 5.05 | 22.88 |
| TraesCSU01G016500.1 | Wheat | mitochondrion | 15.14 | 22.88 |
| TraesCS5B01G284300.1 | Wheat | cytosol | 14.58 | 22.67 |
| TraesCS5D01G292400.1 | Wheat | cytosol | 14.58 | 22.67 |
| TraesCS3B01G452600.1 | Wheat | extracellular | 13.64 | 22.12 |
| Solyc08g006920.1.1 | Tomato | cytosol, mitochondrion, nucleus | 12.52 | 22.11 |
| TraesCS6A01G089600.1 | Wheat | cytosol, mitochondrion | 14.02 | 21.99 |
| HORVU6Hr1G014660.1 | Barley | cytosol | 8.6 | 21.6 |
| EES14677 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 18.88 | 21.49 |
| TraesCS6B01G112000.1 | Wheat | mitochondrion | 13.83 | 21.45 |
| HORVU6Hr1G070700.2 | Barley | mitochondrion | 15.51 | 20.96 |
| TraesCSU01G016600.1 | Wheat | mitochondrion | 10.47 | 20.74 |
| Os08t0193300-00 | Rice | cytosol | 12.9 | 20.72 |
| Os08t0191300-00 | Rice | cytosol, golgi | 9.91 | 20.62 |
| Os08t0195000-00 | Rice | cytosol, peroxisome, plastid | 9.16 | 19.6 |
| Os08t0195900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 10.84 | 19.21 |
| TraesCS3D01G413000.1 | Wheat | cytosol | 15.51 | 18.95 |
| TraesCS6B01G067500.1 | Wheat | cytosol, extracellular | 8.6 | 18.93 |
| TraesCS3B01G452400.1 | Wheat | cytosol | 15.7 | 18.88 |
| TraesCS3D01G412900.1 | Wheat | cytosol, plastid | 16.45 | 18.8 |
| TraesCS3B01G452300.1 | Wheat | plastid | 16.26 | 18.71 |
| TraesCS6A01G051000.1 | Wheat | plastid | 12.71 | 18.28 |
| TraesCS3B01G452500.1 | Wheat | cytosol | 16.07 | 18.18 |
| HORVU3Hr1G092720.1 | Barley | cytosol, mitochondrion, nucleus | 16.07 | 18.14 |
| HORVU6Hr1G070690.2 | Barley | extracellular, mitochondrion, plasma membrane | 10.09 | 18.06 |
| TraesCS3A01G417400.1 | Wheat | cytosol | 16.45 | 17.74 |
| TraesCS3A01G417500.1 | Wheat | cytosol | 12.71 | 17.39 |
| TraesCS5D01G484100.1 | Wheat | cytosol | 11.03 | 15.9 |
| Os08t0196200-01 | Rice | cytosol | 5.05 | 9.85 |
| Os08t0194000-00 | Rice | cytosol, vacuole | 1.12 | 1.59 |
Protein Annotations
| EnsemblPlants:Bra034194.1 | EnsemblPlants:Bra034194.1-P | EnsemblPlantsGene:Bra034194 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 | PFAM:PF00646 | PFscan:PS50181 | SEG:seg |
| SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI0002543BE8 | UniProt:M4EZF1 | MapMan:35.1 | : |
Description
AT4G05460 (E=3e-078) | F-box family protein (FBL20)
Coordinates
chrA01:+:27001038..27005730
Molecular Weight (calculated)
61055.0 Da
IEP (calculated)
4.979
GRAVY (calculated)
-0.268
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSYLTPVV KDGECRNWSE LPFELMSSIL CRLDLIGVFE NAQKVCTSWR RVCKDPAMWR KIDMYNLGLD LGYNPEIICR HAVDRSQGGL VEINIWHFGT
101: DSLLNYIADS SRNLRSLKFA LISPITTEGL TEALVKLPLL EELELFYNRL LEDSLKAVGQ SCPNLKTLKL NCLGIAPPWH VSDDDALAIA ETMHGLRFLQ
201: LFANGLTDVG LKAILDNCPD LEHLDLRHCF NVHFSGDLKK RCYERIKVLR PPNDSTDDYP YIANDTSDDE DPFVPDANSD GFGTNPSTAK FLVAEGMAKR
301: NPSSSGLAMT WHPCRDTKHI CCCYRSFLFG LRDKRESLRF CEAERKIKHV ILLIALLKLP LLEVSYCTLL AESLKVVGQS CPKLKTLKLN RRCYRRPRYV
401: SEDDALAIAE TVPGLRNLQL FGNMLSDIGL NTILDNCPNL ERLDLRMCLN VNFVGDLKKQ CSERIKVMRR PGDSTHDYPY EVFFYDANSF DDYFPEVDYP
501: EDDDPYYPED HYFPATSDNY GDDQYEIDIF GFVQI
101: DSLLNYIADS SRNLRSLKFA LISPITTEGL TEALVKLPLL EELELFYNRL LEDSLKAVGQ SCPNLKTLKL NCLGIAPPWH VSDDDALAIA ETMHGLRFLQ
201: LFANGLTDVG LKAILDNCPD LEHLDLRHCF NVHFSGDLKK RCYERIKVLR PPNDSTDDYP YIANDTSDDE DPFVPDANSD GFGTNPSTAK FLVAEGMAKR
301: NPSSSGLAMT WHPCRDTKHI CCCYRSFLFG LRDKRESLRF CEAERKIKHV ILLIALLKLP LLEVSYCTLL AESLKVVGQS CPKLKTLKLN RRCYRRPRYV
401: SEDDALAIAE TVPGLRNLQL FGNMLSDIGL NTILDNCPNL ERLDLRMCLN VNFVGDLKKQ CSERIKVMRR PGDSTHDYPY EVFFYDANSF DDYFPEVDYP
501: EDDDPYYPED HYFPATSDNY GDDQYEIDIF GFVQI
001: MASSSSPPAA MEVGESTNWT ELPPELTSAI LHRLGAIEIL ENAQKVCRSW RRVCKDPSMW RKIDMHNLGD LDDMDYNLEI MCRHAVDRSQ GGLVDIGIWY
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
101: FGTVDLLNYI AHRSSNLRSL RLIRCSQITD DGFVEAVVKL PLEELELSYC SFSVESLRVV GQCCLNMKTL KLNKHPQKEN DDDALAIAET MPKLRHLQLC
201: GNGLSDTGLN AILDNCSNLE HLDLRRCFNV NLVGDLQKRC FESVKVVRHP NDSIHDIDIG SSEDEDPYDF SDIDLMSGDD DFEGYYDFSG ASDFSDYDQF
301: DF
Arabidopsis Description
SKIP19F-box protein SKIP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.