Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049487_P001 | Maize | cytosol | 85.09 | 84.17 |
| EES14624 | Sorghum | cytosol | 84.95 | 84.15 |
| Os04t0643000-01 | Rice | cytosol, plasma membrane | 83.31 | 83.31 |
| Zm00001d024466_P001 | Maize | cytosol | 81.26 | 80.49 |
| Os02t0746000-01 | Rice | cytosol | 77.02 | 76.49 |
| Os03t0786800-01 | Rice | cytosol, plasma membrane | 9.99 | 47.1 |
| Os05t0149600-02 | Rice | cytosol, plasma membrane | 14.23 | 40.15 |
| Os01t0369000-01 | Rice | cytosol | 35.16 | 34.54 |
| Os01t0369200-01 | Rice | cytosol | 31.87 | 31.23 |
| Os05t0193900-00 | Rice | cytosol | 12.31 | 22.33 |
| Os01t0935300-02 | Rice | cytosol | 8.07 | 19.67 |
| Os01t0706200-01 | Rice | cytosol | 3.83 | 17.5 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:19.2.2.8.2.1 | EntrezGene:4344771 | ProteinID:BAD05712.1 |
| ProteinID:BAD05794.1 | ProteinID:BAF23008.1 | ProteinID:BAT04020.1 | ProteinID:BAT04021.1 | ncoils:Coil | InterPro:Cullin_N |
| InterPro:Cullin_homology | InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain | InterPro:Cullin_repeat-like_dom_sf | ProteinID:EAZ41667.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031461 | GO:GO:0031625 | GO:GO:0061630 |
| GO:GO:0080008 | InterPro:IPR016158 | InterPro:IPR036388 | EnsemblPlantsGene:Os08g0170900 | EnsemblPlants:Os08t0170900-01 | PFAM:PF00888 |
| PFAM:PF10557 | PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF79 | UniProt:Q6YYL1 | SMART:SM00182 |
| SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF74788 | SUPFAM:SSF75632 | UniParc:UPI000022F2E6 | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | RefSeq:XP_015650664.1 | : | : | : | : |
Description
CULLIN 3CWinged helix repressor DNA-binding domain containing protein. (Os08t0170900-01);Similar to H0306F03.4 protein. (Os08t0170900-02)
Coordinates
chr8:-:4153416..4157248
Molecular Weight (calculated)
85012.2 Da
IEP (calculated)
7.414
GRAVY (calculated)
-0.578
Length
731 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRKKPSRI EPFRHKVETD PRFFEKAWRK LDDAIREIYN HNASGLSFEE LYRTAYNLVL HKHGPKLYDK LTENMEDHLQ EMRVSIEAAQ GGLFLVELQR
101: KWDDHNKALQ MIRDILMYMD RVFIPTNKKT PVFDLGLDLW RDTIVRSPKI HGRLLDTLLD LIHRERTGEV INRSLMRSTT KMLMDLGSSV YQDDFERPFL
201: EVSASFYSGE SQKFIECCSC GEYLKKAQQR LDEEAERVSQ YMDAKTDEKI TAVVVKEMLA NHMQRLILME NSGLVNMLVE DKYEDLTMMY SLFQRVPDGH
301: STIKSVMNSH VKETGKDMVM DPERLKDPVD FVQRLLNEKD KYDSIVTTSF SNDKSFQNAL NSSFEHFINL NNRCPEFISL YVDDKLRKGM KEANEEDVET
401: VLDKVMMLFR YLQEKDLFEK YYKQHLAKRL LSGKAASDDS ERSMLVKLKT ECGYQFTSKL EGMFNDLKTS HDTTQRFYAG TPDLGDAPTI SVQILTTGSW
501: PTQPCNTCNL PPEILGVSEM FRGFYLGTHN GRRLTWQTNM GTADIKAVFG NGSKHELNVS TYQMCVLMLF NSADCLSYRD IEQTTAIPSA DLKRCLQSLA
601: LVKGKNVLRK EPMSRDISDD DNFYVNDKFT SKLFKVKIGT VATQKESEPE KMETRQRVEE DRKPQIEAAI VRIMKSRRVL DHNSIVTEVT KQLQPRFMPN
701: PVVIKKRVES LIEREFLERD KTDRKLYRYL A
101: KWDDHNKALQ MIRDILMYMD RVFIPTNKKT PVFDLGLDLW RDTIVRSPKI HGRLLDTLLD LIHRERTGEV INRSLMRSTT KMLMDLGSSV YQDDFERPFL
201: EVSASFYSGE SQKFIECCSC GEYLKKAQQR LDEEAERVSQ YMDAKTDEKI TAVVVKEMLA NHMQRLILME NSGLVNMLVE DKYEDLTMMY SLFQRVPDGH
301: STIKSVMNSH VKETGKDMVM DPERLKDPVD FVQRLLNEKD KYDSIVTTSF SNDKSFQNAL NSSFEHFINL NNRCPEFISL YVDDKLRKGM KEANEEDVET
401: VLDKVMMLFR YLQEKDLFEK YYKQHLAKRL LSGKAASDDS ERSMLVKLKT ECGYQFTSKL EGMFNDLKTS HDTTQRFYAG TPDLGDAPTI SVQILTTGSW
501: PTQPCNTCNL PPEILGVSEM FRGFYLGTHN GRRLTWQTNM GTADIKAVFG NGSKHELNVS TYQMCVLMLF NSADCLSYRD IEQTTAIPSA DLKRCLQSLA
601: LVKGKNVLRK EPMSRDISDD DNFYVNDKFT SKLFKVKIGT VATQKESEPE KMETRQRVEE DRKPQIEAAI VRIMKSRRVL DHNSIVTEVT KQLQPRFMPN
701: PVVIKKRVES LIEREFLERD KTDRKLYRYL A
001: MSNQKKRNFQ IEAFKQRVVV DPKYADKTWK ILEHAIHEIY NHNASGLSFE ELYRNAYNMV LHKYGDKLYT GLVTTMTFHL KEICKSIEEA QGGAFLELLN
101: RKWNDHNKAL QMIRDILMYM DRTYVSTTKK THVHELGLHL WRDNVVYSSK IQTRLLNTLL DLVHKERTGE VIDRVLMRNV IKMFMDLGES VYQDDFEKPF
201: LEASAEFYKV ESMEFIESCD CGEYLKKAEK PLVEEVERVV NYLDAKSEAK ITSVVEREMI ANHVQRLVHM ENSGLVNMLL NDKYEDMGRM YSLFRRVANG
301: LVTVRDVMTL HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDRIINMA FNNDKTFQNA LNSSFEYFVN LNTRSPEFIS LFVDDKLRKG LKGVGEEDVD
401: LILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERNLIVKLK TECGYQFTSK LEGMFTDMKT SHDTLLGFYN SHPELSEGPT LVVQVLTTGS
501: WPTQPTIQCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAVF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPT PDLKRCLQSM
601: ACVKGKNVLR KEPMSKEIAE EDWFVVNDRF ASKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRRV LDHNNIIAEV TKQLQTRFLA
701: NPTEIKKRIE SLIERDFLER DNTDRKLYRY LA
101: RKWNDHNKAL QMIRDILMYM DRTYVSTTKK THVHELGLHL WRDNVVYSSK IQTRLLNTLL DLVHKERTGE VIDRVLMRNV IKMFMDLGES VYQDDFEKPF
201: LEASAEFYKV ESMEFIESCD CGEYLKKAEK PLVEEVERVV NYLDAKSEAK ITSVVEREMI ANHVQRLVHM ENSGLVNMLL NDKYEDMGRM YSLFRRVANG
301: LVTVRDVMTL HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDRIINMA FNNDKTFQNA LNSSFEYFVN LNTRSPEFIS LFVDDKLRKG LKGVGEEDVD
401: LILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERNLIVKLK TECGYQFTSK LEGMFTDMKT SHDTLLGFYN SHPELSEGPT LVVQVLTTGS
501: WPTQPTIQCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAVF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPT PDLKRCLQSM
601: ACVKGKNVLR KEPMSKEIAE EDWFVVNDRF ASKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRRV LDHNNIIAEV TKQLQTRFLA
701: NPTEIKKRIE SLIERDFLER DNTDRKLYRY LA
Arabidopsis Description
CUL3BCullin-3B [Source:UniProtKB/Swiss-Prot;Acc:Q9C9L0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.