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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • nucleus 1
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0935300-02 Rice cytosol 22.5 12.0
Os05t0193900-00 Rice cytosol 25.0 9.93
Os01t0369200-01 Rice cytosol 31.88 6.84
Os01t0369000-01 Rice cytosol 30.62 6.59
Os04t0643000-01 Rice cytosol, plasma membrane 17.5 3.83
Os08t0170900-01 Rice cytosol 17.5 3.83
Os02t0746000-01 Rice cytosol 16.25 3.53
Os05t0149600-02 Rice cytosol, plasma membrane 0.62 0.39
Os03t0786800-01 Rice cytosol, plasma membrane 0.0 0.0
Protein Annotations
Gene3D:1.20.1310.10MapMan:35.1UniProt:A0A0P0V765ProteinID:BAS73938.1InterPro:Cullin_NInterPro:Cullin_repeat-like_dom_sf
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0006511GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0019538
GO:GO:0031625EnsemblPlantsGene:Os01g0706200EnsemblPlants:Os01t0706200-01PFAM:PF00888PANTHER:PTHR11932PANTHER:PTHR11932:SF83
SUPFAM:SSF74788UniParc:UPI000393BA82::::
Description
Cullin, N-terminal domain containing protein. (Os01t0706200-01)
Coordinates
chr1:+:29290139..29295684
Molecular Weight (calculated)
18910.0 Da
IEP (calculated)
8.682
GRAVY (calculated)
-0.435
Length
160 amino acids
Sequence
(BLAST)
001: MTRTAIARPP PMDIEDGWRR LAAGFQKLLR ILDGEERLSF SGAEYSELLQ ITYKLCYESP AGHAAEMYDR WDKTIRHHIV YQVLPSLQDM QGEPLLKNFV
101: HHWENHKVLM KWLKSVCMYL RLAFTNQRSL PPIMDIALNL FKNVVFEELN KKMTNHHRND
Best Arabidopsis Sequence Match ( AT4G02570.1 )
(BLAST)
001: MERKTIDLEQ GWDYMQTGIT KLKRILEGLN EPAFDSEQYM MLYTTIYNMC TQKPPHDYSQ QLYDKYREAF EEYINSTVLP ALREKHDEFM LRELFKRWSN
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA
Arabidopsis Description
CUL1AT4G02570 protein [Source:UniProtKB/TrEMBL;Acc:B9DGE3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.