Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRG89021 | |
| KRG90334 | |
| KRG92429 | |
| KRG92430 | |
| KRG94665 | |
| KRG96377 | nucleus, nucleus |
| KRG96405 | |
| KRG96613 | |
| KRH00001 | |
| KRH05923 | |
| KRH06858 | |
| KRH08397 | |
| KRH09813 | |
| KRH09948 | |
| KRH17404 | |
| KRH22880 | |
| KRH22924 | |
| KRH23388 | |
| KRH23504 | |
| KRH24914 | |
| KRH25023 | |
| KRH26391 | |
| KRH26435 | |
| KRH29907 | |
| KRH31615 | |
| KRH31921 | nucleus, nucleus |
| KRH33583 | |
| KRH33660 | |
| KRH34375 | |
| KRH34377 | |
| KRH39325 | |
| KRH41538 | |
| KRH42483 | |
| KRH44271 | |
| KRH44390 | |
| KRH47203 | |
| KRH47514 | |
| KRH49135 | |
| KRH52428 | |
| KRH58580 | |
| KRH60250 | |
| KRH61758 | |
| KRH65922 | |
| KRH68108 | nucleus, nucleus |
| KRH68142 | |
| KRH68346 | |
| KRH69048 | |
| KRH69143 | |
| KRH70053 | |
| KRH71336 | |
| KRH71533 | nucleus, nucleus |
| KRH74730 | |
| KRH75716 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34377 | Soybean | nucleus | 67.98 | 94.14 |
| VIT_05s0020g04690.t01 | Wine grape | cytosol, nucleus, plastid | 58.61 | 79.84 |
| Bra001900.1-P | Field mustard | cytosol, nucleus, plastid | 53.78 | 75.11 |
| CDX92973 | Canola | cytosol, nucleus, plastid | 53.78 | 75.11 |
| CDY10694 | Canola | mitochondrion | 39.27 | 74.71 |
| PGSC0003DMT400015610 | Potato | nucleus | 53.47 | 74.37 |
| CDY62130 | Canola | cytosol, nucleus, plastid | 51.96 | 73.82 |
| CDY47148 | Canola | nucleus | 51.96 | 73.82 |
| Bra039855.1-P | Field mustard | nucleus | 51.96 | 73.82 |
| Solyc09g083290.2.1 | Tomato | nucleus | 52.27 | 73.31 |
| AT3G23050.1 | Thale cress | cytosol, nucleus, plastid | 53.47 | 72.84 |
| Bra033886.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 53.17 | 72.73 |
| AT4G14550.2 | Thale cress | nucleus | 51.06 | 72.22 |
| CDY30781 | Canola | cytosol, nucleus, plastid | 51.36 | 70.83 |
| CDY63910 | Canola | cytosol, nucleus, plastid | 51.36 | 70.83 |
| CDY32537 | Canola | nucleus | 48.64 | 70.61 |
| Bra032520.1-P | Field mustard | nucleus | 48.34 | 70.48 |
| CDY10068 | Canola | cytosol, nucleus, plastid | 48.34 | 70.18 |
| CDX89832 | Canola | nucleus | 47.43 | 70.09 |
| AT1G04250.1 | Thale cress | cytosol, nucleus, plastid | 48.34 | 69.87 |
| CDY18214 | Canola | nucleus | 47.13 | 69.64 |
| Bra015298.1-P | Field mustard | nucleus | 47.13 | 69.64 |
| CDY10349 | Canola | endoplasmic reticulum, extracellular | 51.66 | 69.51 |
| Bra030560.1-P | Field mustard | nucleus | 48.04 | 69.43 |
| CDY15493 | Canola | cytosol, nucleus, plastid | 48.04 | 69.43 |
| KRG95616 | Soybean | nucleus | 51.36 | 67.46 |
| KRH67289 | Soybean | nucleus | 51.66 | 67.32 |
| KRH32099 | Soybean | nucleus | 50.15 | 66.94 |
| KRG92683 | Soybean | nucleus | 45.62 | 66.52 |
| GSMUA_Achr10P... | Banana | nucleus | 47.13 | 64.73 |
| GSMUA_Achr4P21020_001 | Banana | nucleus | 48.34 | 64.52 |
| GSMUA_Achr8P20610_001 | Banana | nucleus | 47.43 | 64.34 |
| KRG96977 | Soybean | nucleus | 44.41 | 63.91 |
| KRH68738 | Soybean | nucleus | 46.83 | 63.79 |
| KRH34375 | Soybean | cytosol, nucleus | 23.26 | 63.11 |
| GSMUA_Achr9P25550_001 | Banana | nucleus | 45.92 | 62.55 |
| GSMUA_Achr9P10700_001 | Banana | nucleus | 44.71 | 61.41 |
| TraesCS5A01G058600.1 | Wheat | nucleus | 46.22 | 60.47 |
| TraesCS5B01G058500.1 | Wheat | nucleus | 45.92 | 60.32 |
| TraesCS5D01G069300.1 | Wheat | nucleus | 45.92 | 60.32 |
| KRH71337 | Soybean | nucleus | 30.51 | 59.41 |
| EER90896 | Sorghum | nucleus | 40.18 | 56.6 |
| GSMUA_Achr4P22520_001 | Banana | nucleus | 43.2 | 56.52 |
| Os03t0742900-01 | Rice | vacuole | 40.18 | 56.36 |
| Zm00001d033976_P002 | Maize | nucleus | 40.18 | 56.12 |
| TraesCS5D01G392000.1 | Wheat | nucleus | 39.27 | 56.03 |
| EES17334 | Sorghum | cytosol | 47.43 | 55.87 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 38.97 | 55.84 |
| Os03t0633500-01 | Rice | cytosol | 39.27 | 55.79 |
| TraesCS5A01G382600.1 | Wheat | nucleus | 39.27 | 55.79 |
| KRH23505 | Soybean | nucleus | 30.82 | 55.74 |
| TraesCS5B01G381900.1 | Wheat | cytosol, mitochondrion, nucleus | 42.6 | 55.73 |
| TraesCS5B01G386800.1 | Wheat | nucleus | 39.27 | 55.56 |
| HORVU5Hr1G014300.4 | Barley | nucleus | 46.22 | 55.43 |
| HORVU5Hr1G094220.1 | Barley | nucleus | 39.58 | 55.27 |
| KRH09810 | Soybean | nucleus | 31.12 | 54.5 |
| Zm00001d013302_P002 | Maize | nucleus | 37.46 | 54.39 |
| Os12t0601300-01 | Rice | nucleus | 45.32 | 54.15 |
| KRH71338 | Soybean | nucleus | 32.33 | 52.97 |
| OQU91311 | Sorghum | cytosol, mitochondrion, nucleus | 41.09 | 51.52 |
| KRG92430 | Soybean | nucleus | 29.61 | 50.52 |
| KRH69048 | Soybean | nucleus | 29.0 | 50.0 |
| KRH09813 | Soybean | nucleus | 27.79 | 49.2 |
| KRH47514 | Soybean | nucleus | 27.79 | 49.2 |
| KRH32098 | Soybean | nucleus | 25.68 | 48.85 |
| HORVU5Hr1G093580.2 | Barley | cytosol, nucleus, peroxisome | 41.09 | 48.4 |
| KRH23504 | Soybean | nucleus | 27.49 | 48.15 |
| KRH67288 | Soybean | nucleus | 29.91 | 48.06 |
| KRG95613 | Soybean | nucleus | 29.61 | 48.04 |
| KRH44390 | Soybean | nucleus | 27.79 | 47.18 |
| KRH60250 | Soybean | nucleus | 39.88 | 45.99 |
| KRH74730 | Soybean | plastid | 22.05 | 45.34 |
| KRH39325 | Soybean | nucleus | 40.79 | 43.97 |
| TraesCS5D01G388300.2 | Wheat | cytosol | 41.09 | 43.17 |
| Zm00001d041416_P001 | Maize | nucleus | 44.71 | 43.02 |
| TraesCS5A01G378300.2 | Wheat | cytosol, mitochondrion, nucleus | 39.58 | 42.95 |
| KRH23426 | Soybean | nucleus | 39.27 | 42.35 |
| KRH09902 | Soybean | nucleus | 40.18 | 41.69 |
| KRH75635 | Soybean | nucleus | 39.58 | 41.46 |
| CDY63072 | Canola | nucleus | 48.34 | 40.2 |
| KRH47242 | Soybean | nucleus | 36.86 | 38.24 |
| KRH39524 | Soybean | nucleus | 40.79 | 38.14 |
| KRH44313 | Soybean | nucleus | 36.86 | 37.89 |
| KRH74432 | Soybean | nucleus | 41.09 | 37.88 |
| KRH45470 | Soybean | nucleus | 39.88 | 37.71 |
| KRH62157 | Soybean | nucleus | 40.79 | 37.5 |
| KRH41538 | Soybean | golgi, plasma membrane | 39.27 | 36.41 |
| KRH72523 | Soybean | nucleus | 39.58 | 35.79 |
| KRH16912 | Soybean | nucleus | 39.58 | 35.69 |
| KRH52867 | Soybean | nucleus | 37.46 | 34.07 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | UniProt:A0A0R0EE57 | EMBL:ACUP02012753 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlantsGene:GLYMA_20G210400 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | InterPro:IPR000270 | EnsemblPlants:KRG92429 | ProteinID:KRG92429 | ProteinID:KRG92429.1 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF89 | SUPFAM:SSF54277 | UniParc:UPI0003DE89AF |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:44638486..44641198
Molecular Weight (calculated)
36788.3 Da
IEP (calculated)
9.271
GRAVY (calculated)
-0.560
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPQAQVPQS YIIEGYHTHS LSLVIYIAKQ TKQHYNRKRT QSEREGSYSH KEKNFQRGES KRVLLFLFYI YLGAKLCEFI DKPEMATMLT KEHGLNLKET
101: ELCLGLPGGG GGGGGGGGGG GGEVETPRAT GKRGFSETVD LKLNLHSKED LNENLKNVSK EKTLLKDPAK PPAKAQVVGW PPVRSYRKNM MAVQKVSTED
201: VAEKTTSSTA NPGAFVKVSM DGAPYLRKVD LTMYKSYKEL SDALAKMFSS FTMGNYGAQG MIDFMNESKL MDLLNSSEYV PSYEDKDGDW MLVGDVPWEM
301: FVESCKRLRI MKGSEAIGLA PRAMEKCKSR S
101: ELCLGLPGGG GGGGGGGGGG GGEVETPRAT GKRGFSETVD LKLNLHSKED LNENLKNVSK EKTLLKDPAK PPAKAQVVGW PPVRSYRKNM MAVQKVSTED
201: VAEKTTSSTA NPGAFVKVSM DGAPYLRKVD LTMYKSYKEL SDALAKMFSS FTMGNYGAQG MIDFMNESKL MDLLNSSEYV PSYEDKDGDW MLVGDVPWEM
301: FVESCKRLRI MKGSEAIGLA PRAMEKCKSR S
001: MNLKETELCL GLPGGTETVE SPAKSGVGNK RGFSETVDLK LNLQSNKQGH VDLNTNGAPK EKTFLKDPSK PPAKAQVVGW PPVRNYRKNV MANQKSGEAE
101: EAMSSGGGTV AFVKVSMDGA PYLRKVDLKM YTSYKDLSDA LAKMFSSFTM GSYGAQGMID FMNESKVMDL LNSSEYVPSY EDKDGDWMLV GDVPWPMFVE
201: SCKRLRIMKG SEAIGLAPRA MEKFKNRS
101: EAMSSGGGTV AFVKVSMDGA PYLRKVDLKM YTSYKDLSDA LAKMFSSFTM GSYGAQGMID FMNESKVMDL LNSSEYVPSY EDKDGDWMLV GDVPWPMFVE
201: SCKRLRIMKG SEAIGLAPRA MEKFKNRS
Arabidopsis Description
IAA14indole-3-acetic acid inducible 14 [Source:TAIR;Acc:AT4G14550]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.