Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90896 | Sorghum | nucleus | 89.04 | 86.38 |
| Zm00001d033976_P002 | Maize | nucleus | 87.28 | 83.97 |
| Os03t0742900-01 | Rice | vacuole | 82.02 | 79.24 |
| TraesCS5A01G382600.1 | Wheat | nucleus | 79.82 | 78.11 |
| TraesCS5B01G386800.1 | Wheat | nucleus | 79.39 | 77.35 |
| TraesCS5D01G392000.1 | Wheat | nucleus | 78.51 | 77.16 |
| HORVU5Hr1G094220.1 | Barley | nucleus | 78.95 | 75.95 |
| VIT_14s0081g00010.t01 | Wine grape | nucleus, plastid | 46.49 | 62.35 |
| CDY10694 | Canola | mitochondrion | 42.98 | 56.32 |
| PGSC0003DMT400041976 | Potato | nucleus | 51.75 | 55.4 |
| KRG92683 | Soybean | nucleus | 53.95 | 54.19 |
| Solyc06g053830.2.1 | Tomato | nucleus | 51.32 | 53.67 |
| Solyc06g008590.2.1 | Tomato | nucleus | 47.81 | 52.4 |
| KRH34377 | Soybean | nucleus | 54.82 | 52.3 |
| PGSC0003DMT400013627 | Potato | nucleus | 48.68 | 51.87 |
| CDY41894 | Canola | cytosol, nucleus, plastid | 52.19 | 51.52 |
| Bra040398.1-P | Field mustard | nucleus | 52.19 | 51.52 |
| VIT_07s0141g00290.t01 | Wine grape | cytosol, nucleus, plastid | 53.51 | 51.26 |
| VIT_05s0020g04690.t01 | Wine grape | cytosol, nucleus, plastid | 54.39 | 51.03 |
| CDX89832 | Canola | nucleus | 50.0 | 50.89 |
| CDY47148 | Canola | nucleus | 51.75 | 50.64 |
| CDY18214 | Canola | nucleus | 49.56 | 50.45 |
| Bra015298.1-P | Field mustard | nucleus | 49.56 | 50.45 |
| Bra039855.1-P | Field mustard | nucleus | 51.32 | 50.21 |
| KRH68738 | Soybean | nucleus | 53.51 | 50.21 |
| KRH32099 | Soybean | nucleus | 54.39 | 50.0 |
| AT3G04730.1 | Thale cress | cytosol, nucleus, plastid | 51.75 | 50.0 |
| CDX92973 | Canola | cytosol, nucleus, plastid | 51.75 | 49.79 |
| Bra001900.1-P | Field mustard | cytosol, nucleus, plastid | 51.75 | 49.79 |
| Bra033886.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 52.63 | 49.59 |
| CDY21111 | Canola | cytosol, nucleus, plastid | 51.32 | 49.58 |
| Solyc09g083290.2.1 | Tomato | nucleus | 51.32 | 49.58 |
| KRG96977 | Soybean | nucleus | 50.0 | 49.57 |
| CDY10068 | Canola | cytosol, nucleus, plastid | 49.56 | 49.56 |
| Bra032520.1-P | Field mustard | nucleus | 49.12 | 49.34 |
| PGSC0003DMT400015610 | Potato | nucleus | 51.32 | 49.16 |
| CDY32537 | Canola | nucleus | 49.12 | 49.12 |
| CDY62130 | Canola | cytosol, nucleus, plastid | 50.0 | 48.93 |
| AT1G04250.1 | Thale cress | cytosol, nucleus, plastid | 49.12 | 48.91 |
| Bra030560.1-P | Field mustard | nucleus | 49.12 | 48.91 |
| Bra040122.1-P | Field mustard | nucleus | 48.25 | 48.89 |
| KRH67289 | Soybean | nucleus | 54.39 | 48.82 |
| KRG95616 | Soybean | nucleus | 53.95 | 48.81 |
| PGSC0003DMT400050101 | Potato | cytosol, nucleus, plastid | 53.07 | 48.59 |
| CDY15493 | Canola | cytosol, nucleus, plastid | 48.68 | 48.47 |
| AT4G14550.2 | Thale cress | nucleus | 49.56 | 48.29 |
| Solyc01g097290.2.1 | Tomato | nucleus | 53.07 | 48.21 |
| AT3G23050.1 | Thale cress | cytosol, nucleus, plastid | 51.32 | 48.15 |
| CDY30017 | Canola | cytosol, nucleus, plastid | 50.0 | 48.1 |
| CDY10349 | Canola | endoplasmic reticulum, extracellular | 51.75 | 47.97 |
| CDY63910 | Canola | cytosol, nucleus, plastid | 50.0 | 47.5 |
| CDY30781 | Canola | cytosol, nucleus, plastid | 50.0 | 47.5 |
| KRH71337 | Soybean | nucleus | 32.46 | 43.53 |
| Zm00001d037774_P001 | Maize | cytosol | 46.49 | 43.44 |
| Zm00001d036918_P001 | Maize | nucleus | 37.28 | 42.93 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 42.98 | 42.42 |
| Zm00001d013071_P001 | Maize | nucleus | 33.33 | 41.99 |
| CDY50750 | Canola | nucleus, plastid | 52.19 | 40.89 |
| Zm00001d018973_P001 | Maize | nucleus | 35.53 | 40.1 |
| Zm00001d039624_P001 | Maize | nucleus | 37.72 | 39.09 |
| Zm00001d033319_P001 | Maize | nucleus | 37.72 | 38.05 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 54.39 | 37.46 |
| Zm00001d041418_P001 | Maize | nucleus | 37.72 | 37.39 |
| Zm00001d008749_P002 | Maize | cytosol | 35.53 | 36.99 |
| Zm00001d013707_P001 | Maize | nucleus | 35.96 | 36.61 |
| Zm00001d030993_P001 | Maize | nucleus | 31.58 | 36.18 |
| Zm00001d041416_P001 | Maize | nucleus | 53.51 | 35.47 |
| Zm00001d043878_P001 | Maize | nucleus, plastid | 39.04 | 33.09 |
| Zm00001d009532_P001 | Maize | nucleus | 39.91 | 32.38 |
| Zm00001d010411_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 45.18 | 31.31 |
| Zm00001d038980_P001 | Maize | cytosol, nucleus, plastid | 38.6 | 30.45 |
| CDY63072 | Canola | nucleus | 50.44 | 28.89 |
| Zm00001d011588_P003 | Maize | nucleus, plastid | 37.72 | 25.22 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 34.21 | 24.38 |
| Zm00001d024008_P001 | Maize | mitochondrion | 31.14 | 20.4 |
Protein Annotations
| EntrezGene:100283579 | Gene3D:3.10.20.90 | MapMan:35.1 | ProteinID:AQK63057.1 | ProteinID:AQK63058.1 | InterPro:AUX/IAA_dom |
| InterPro:AUX_IAA | EMBL:BT069632 | UniProt:C0PMW3 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 | InterPro:PB1_dom | PFAM:PF02309 |
| PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF21 | SUPFAM:SSF54277 | UniParc:UPI000195D08D | EnsemblPlantsGene:Zm00001d013302 |
| EnsemblPlants:Zm00001d013302_P002 | EnsemblPlants:Zm00001d013302_T002 | SEG:seg | : | : | : |
Description
Aux/IAA-transcription factor 21Auxin-responsive protein IAA14
Coordinates
chr5:+:8065262..8071957
Molecular Weight (calculated)
24382.1 Da
IEP (calculated)
9.007
GRAVY (calculated)
-0.522
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGADVDVGT ELRLGLPGGG AAAAKKDTID LKLKLPTAGM EEAAAAARPE PAAEKAKRPA EAPAADAEKP PAPKAQAVGW PPVRSYRRNA MTVVQAVRSK
101: KEEEPEKQQQ PAAANAFVKV SMDGAPYLRK VDLKTYGSYK DLSAALKKMF GTFVTATGNS MNEGRLVDPA GDADDVVTTY EDKDGDWMLV GDVPWEMFVD
201: SCKRLRIMKS SEAIGLAPRT KDKCKNKS
101: KEEEPEKQQQ PAAANAFVKV SMDGAPYLRK VDLKTYGSYK DLSAALKKMF GTFVTATGNS MNEGRLVDPA GDADDVVTTY EDKDGDWMLV GDVPWEMFVD
201: SCKRLRIMKS SEAIGLAPRT KDKCKNKS
001: MMGSVELNLR ETELCLGLPG GDTVAPVTGN KRGFSETVDL KLNLNNEPAN KEGSTTHDVV TFDSKEKSAC PKDPAKPPAK AQVVGWPPVR SYRKNVMVSC
101: QKSSGGPEAA AFVKVSMDGA PYLRKIDLRM YKSYDELSNA LSNMFSSFTM GKHGGEEGMI DFMNERKLMD LVNSWDYVPS YEDKDGDWML VGDVPWPMFV
201: DTCKRLRLMK GSDAIGLAPR AMEKCKSRA
101: QKSSGGPEAA AFVKVSMDGA PYLRKIDLRM YKSYDELSNA LSNMFSSFTM GKHGGEEGMI DFMNERKLMD LVNSWDYVPS YEDKDGDWML VGDVPWPMFV
201: DTCKRLRLMK GSDAIGLAPR AMEKCKSRA
Arabidopsis Description
IAA17Auxin-responsive protein IAA17 [Source:UniProtKB/Swiss-Prot;Acc:P93830]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.