Factsheet for Zm00001d039624_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31707	Sorghum	nucleus	95.0	95.0
TraesCS3A01G121300.2	Wheat	nucleus	73.18	79.7
TraesCS3D01G123400.1	Wheat	nucleus	63.64	79.55
TraesCS3B01G140700.1	Wheat	cytosol	69.09	78.76
Zm00001d008749_P002	Maize	cytosol	72.27	72.6
HORVU3Hr1G022540.7	Barley	cytosol, nucleus	63.18	64.35
GSMUA_Achr9P02960_001	Banana	nucleus	52.27	55.56
Zm00001d036918_P001	Maize	nucleus	48.64	54.04
GSMUA_AchrUn_...	Banana	nucleus	53.64	53.88
KRH23505	Soybean	nucleus	43.64	52.46
KRH09810	Soybean	nucleus	44.09	51.32
VIT_11s0016g04490.t01	Wine grape	cytosol, nucleus, plastid	48.64	49.54
PGSC0003DMT400006798	Potato	nucleus	46.82	48.58
GSMUA_Achr4P08960_001	Banana	nucleus	51.36	41.54
Solyc03g120390.2.1	Tomato	nucleus, plastid	47.27	41.27
Zm00001d013071_P001	Maize	nucleus	33.64	40.88
Zm00001d033976_P002	Maize	nucleus	42.73	39.66
Zm00001d013302_P002	Maize	nucleus	39.09	37.72
GSMUA_Achr7P13250_001	Banana	nucleus	48.18	35.69
Zm00001d018973_P001	Maize	nucleus	32.73	35.64
VIT_09s0002g05160.t01	Wine grape	nucleus	47.27	35.37
Zm00001d037774_P001	Maize	cytosol	39.09	35.25
Zm00001d041418_P001	Maize	nucleus	36.82	35.22
Zm00001d033319_P001	Maize	nucleus	35.45	34.51
Zm00001d013707_P001	Maize	nucleus	34.55	33.93
Zm00001d030993_P001	Maize	nucleus	30.0	33.17
Zm00001d043878_P001	Maize	nucleus, plastid	40.45	33.09
Zm00001d009532_P001	Maize	nucleus	39.09	30.61
Zm00001d041416_P001	Maize	nucleus	47.27	30.23
Zm00001d038980_P001	Maize	cytosol, nucleus, plastid	38.64	29.41
Zm00001d011588_P003	Maize	nucleus, plastid	41.82	26.98
Zm00001d010411_P001	Maize	cytosol, endoplasmic reticulum, nucleus	38.64	25.84
Zm00001d034463_P001	Maize	extracellular, golgi	34.09	23.44
Zm00001d024008_P001	Maize	mitochondrion	30.91	19.54

Protein Annotations

EntrezGene:100193444	Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	UniProt:B4FF21
EMBL:BT035709	EMBL:BT040328	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009734	GO:GO:0009987	InterPro:IPR000270	EMBL:KJ728173	ProteinID:ONM29537.1	InterPro:PB1_dom
PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734	PANTHER:PTHR31734:SF86	SUPFAM:SSF54277	UniParc:UPI00017B661D
EnsemblPlantsGene:Zm00001d039624	EnsemblPlants:Zm00001d039624_P001	EnsemblPlants:Zm00001d039624_T001	SEG:seg	:	:

Description

Aux/IAA-transcription factor 8Auxin-responsive protein IAA15

Coordinates

chr3:+:9366940..9370004

Molecular Weight (calculated)

23482.4 Da

IEP (calculated)

8.409

GRAVY (calculated)

-0.350

Length

220 amino acids

Sequence
(BLAST)

001: MSVETERSST ESSGASGLDF EDTALTLTLR LPGSAPSAAA AAAASLSLSS SSSSAFPDPD RKRASSDADP GRSSPLAASS DAAPAPKARV VGWPPVRSYR
101: KNALADAAGS SKAAKFVKVA VDGAPYLRKV DLQAYAGYDQ LLRALQDKFF SHFTIRKFAD DERKLVDAVN GTEYVPTYED KDGDWMLVGD VPWKMFVETC
201: QRLRLMKGSE AVNLAPRAAR

Best Arabidopsis Sequence Match ( AT1G04250.1 )
(BLAST)

001: MMGSVELNLR ETELCLGLPG GDTVAPVTGN KRGFSETVDL KLNLNNEPAN KEGSTTHDVV TFDSKEKSAC PKDPAKPPAK AQVVGWPPVR SYRKNVMVSC
101: QKSSGGPEAA AFVKVSMDGA PYLRKIDLRM YKSYDELSNA LSNMFSSFTM GKHGGEEGMI DFMNERKLMD LVNSWDYVPS YEDKDGDWML VGDVPWPMFV
201: DTCKRLRLMK GSDAIGLAPR AMEKCKSRA

Arabidopsis Description

IAA17Auxin-responsive protein IAA17 [Source:UniProtKB/Swiss-Prot;Acc:P93830]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.