Factsheet for Zm00001d008749_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31707	Sorghum	nucleus	72.6	72.27
Zm00001d039624_P001	Maize	nucleus	72.6	72.27
TraesCS3D01G123400.1	Wheat	nucleus	56.62	70.45
TraesCS3A01G121300.2	Wheat	nucleus	63.47	68.81
TraesCS3B01G140700.1	Wheat	cytosol	59.82	67.88
HORVU3Hr1G022540.7	Barley	cytosol, nucleus	56.16	56.94
Zm00001d036918_P001	Maize	nucleus	46.12	51.01
GSMUA_Achr9P02960_001	Banana	nucleus	47.95	50.72
KRH23505	Soybean	nucleus	42.01	50.27
GSMUA_AchrUn_...	Banana	nucleus	49.32	49.32
KRH09810	Soybean	nucleus	41.55	48.15
VIT_11s0016g04490.t01	Wine grape	cytosol, nucleus, plastid	45.21	45.83
PGSC0003DMT400006798	Potato	nucleus	42.01	43.4
GSMUA_Achr4P08960_001	Banana	nucleus	49.32	39.71
Zm00001d013071_P001	Maize	nucleus	31.51	38.12
Solyc03g120390.2.1	Tomato	nucleus, plastid	42.92	37.3
Zm00001d013302_P002	Maize	nucleus	36.99	35.53
Zm00001d033976_P002	Maize	nucleus	38.36	35.44
GSMUA_Achr7P13250_001	Banana	nucleus	47.95	35.35
Zm00001d041418_P001	Maize	nucleus	35.16	33.48
Zm00001d018973_P001	Maize	nucleus	30.59	33.17
Zm00001d013707_P001	Maize	nucleus	33.79	33.04
VIT_09s0002g05160.t01	Wine grape	nucleus	43.84	32.65
Zm00001d033319_P001	Maize	nucleus	33.33	32.3
Zm00001d037774_P001	Maize	cytosol	34.25	30.74
Zm00001d030993_P001	Maize	nucleus	27.85	30.65
Zm00001d043878_P001	Maize	nucleus, plastid	36.07	29.37
Zm00001d009532_P001	Maize	nucleus	36.99	28.83
Zm00001d041416_P001	Maize	nucleus	45.21	28.78
Zm00001d038980_P001	Maize	cytosol, nucleus, plastid	34.7	26.3
Zm00001d011588_P003	Maize	nucleus, plastid	36.53	23.46
Zm00001d010411_P001	Maize	cytosol, endoplasmic reticulum, nucleus	34.25	22.8
Zm00001d034463_P001	Maize	extracellular, golgi	31.51	21.56
Zm00001d024008_P001	Maize	mitochondrion	32.42	20.4

Protein Annotations

EntrezGene:100194253	Gene3D:3.10.20.90	MapMan:35.1	UniProt:A0A1D6FF66	ProteinID:AQK90583.1	InterPro:AUX/IAA_dom
InterPro:AUX_IAA	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734
GO:GO:0009987	InterPro:IPR000270	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734
PANTHER:PTHR31734:SF86	SUPFAM:SSF54277	UniParc:UPI000843D5D1	EnsemblPlantsGene:Zm00001d008749	EnsemblPlants:Zm00001d008749_P002	EnsemblPlants:Zm00001d008749_T002
SEG:seg	:	:	:	:	:

Description

barren inflorescence1 barren inflorescence1

Coordinates

chr8:-:18951758..18953833

Molecular Weight (calculated)

24201.6 Da

IEP (calculated)

10.136

GRAVY (calculated)

-0.458

Length

219 amino acids

Sequence
(BLAST)

001: MSVDTERSST ESSAASGLGY EDTALALTLR LPGSDPGRSS PLAAPSDAAP SPKTRVVGWP PVRSYRKNAL ADSSKANRSA SFVKVAVDGA AYLRKVDLQA
101: YGGYDQLLRA LQDKFFSHFT IRKFADDERK LVDAVNGTEY VPTYEDKDGD WMLVGDVPWK MFVETCRRLR LMKGSEAVNL GTTKSRPMRR KRNSSVTSTH
201: WLLVAWLVGG TRERTSSLF

Best Arabidopsis Sequence Match ( AT1G04240.1 )
(BLAST)

001: MDEFVNLKET ELRLGLPGTD NVCEAKERVS CCNNNNKRVL STDTEKEIES SSRKTETSPP RKAQIVGWPP VRSYRKNNIQ SKKNESEHEG QGIYVKVSMD
101: GAPYLRKIDL SCYKGYSELL KALEVMFKFS VGEYFERDGY KGSDFVPTYE DKDGDWMLIG DVPWEMFICT CKRLRIMKGS EAKGLGCGV

Arabidopsis Description

SHY2AUX/IAA transcriptional regulator family protein [Source:TAIR;Acc:AT1G04240]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.