Factsheet for Zm00001d036918_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20284	Sorghum	plastid	81.31	86.56
TraesCS7D01G351400.1	Wheat	cytosol, nucleus, plastid	74.24	81.67
TraesCS7B01G256100.1	Wheat	cytosol, nucleus, plastid	73.74	80.66
TraesCS7A01G371500.1	Wheat	cytosol, nucleus, plastid	72.73	79.56
HORVU7Hr1G084940.3	Barley	plastid	57.07	60.11
KRH23505	Soybean	nucleus	47.47	51.37
KRH09810	Soybean	nucleus	47.98	50.26
Zm00001d039624_P001	Maize	nucleus	54.04	48.64
GSMUA_Achr9P02960_001	Banana	nucleus	49.49	47.34
GSMUA_AchrUn_...	Banana	nucleus	52.02	47.03
Zm00001d008749_P002	Maize	cytosol	51.01	46.12
PGSC0003DMT400006798	Potato	nucleus	46.46	43.4
VIT_11s0016g04490.t01	Wine grape	cytosol, nucleus, plastid	46.46	42.59
Zm00001d013071_P001	Maize	nucleus	34.34	37.57
Zm00001d013302_P002	Maize	nucleus	42.93	37.28
Solyc03g120390.2.1	Tomato	nucleus, plastid	46.46	36.51
GSMUA_Achr4P08960_001	Banana	nucleus	50.0	36.4
Zm00001d033976_P002	Maize	nucleus	42.42	35.44
Zm00001d018973_P001	Maize	nucleus	35.35	34.65
Zm00001d041418_P001	Maize	nucleus	37.88	32.61
Zm00001d033319_P001	Maize	nucleus	36.87	32.3
Zm00001d037774_P001	Maize	cytosol	39.39	31.97
Zm00001d030993_P001	Maize	nucleus	31.31	31.16
GSMUA_Achr7P13250_001	Banana	nucleus	45.96	30.64
Zm00001d013707_P001	Maize	nucleus	34.34	30.36
VIT_09s0002g05160.t01	Wine grape	nucleus	44.44	29.93
Zm00001d043878_P001	Maize	nucleus, plastid	37.37	27.51
Zm00001d009532_P001	Maize	nucleus	37.37	26.33
Zm00001d038980_P001	Maize	cytosol, nucleus, plastid	36.87	25.26
Zm00001d010411_P001	Maize	cytosol, endoplasmic reticulum, nucleus	39.39	23.71
Zm00001d041416_P001	Maize	nucleus	40.91	23.55
Zm00001d011588_P003	Maize	nucleus, plastid	37.37	21.7
Zm00001d034463_P001	Maize	extracellular, golgi	34.85	21.56
Zm00001d024008_P001	Maize	mitochondrion	30.3	17.24

Protein Annotations

EntrezGene:100272577	Gene3D:3.10.20.90	MapMan:35.1	ProteinID:AQK82397.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA
UniProt:B4FPE1	EMBL:BT038979	EMBL:EU956305	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009734	GO:GO:0009987	InterPro:IPR000270	EMBL:KJ727474	InterPro:PB1_dom
PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734	PANTHER:PTHR31734:SF34	SUPFAM:SSF54277	UniParc:UPI00017B7E55
EnsemblPlantsGene:Zm00001d036918	EnsemblPlants:Zm00001d036918_P001	EnsemblPlants:Zm00001d036918_T001	SEG:seg	:	:

Description

Aux/IAA-transcription factor 26Auxin-responsive protein IAA15

Coordinates

chr6:-:106378038..106379735

Molecular Weight (calculated)

21377.2 Da

IEP (calculated)

8.677

GRAVY (calculated)

-0.490

Length

198 amino acids

Sequence
(BLAST)

001: MQQDLRNSER RNPEQAHPVM SASSTNSAAS PAVSGLDYDD TALTLALPGS SAEPAADRKR AHADHDKPPS PKARAVGWPP VRAYRRNALR DEARLVKVAV
101: DGAPYLRKVD LAAHDGYAAL LRALHGMFAS CLVAGAGADG AGRIDTAAEY MPTYEDKDGD WMLVGDVPFK MFVDSCKRIR LMKSSEAVNL SPRTSSRQ

Best Arabidopsis Sequence Match ( AT4G14550.1 )
(BLAST)

001: MNLKETELCL GLPGGTETVE SPAKSGVGNK RGFSETVDLK LNLQSNKQGH VDLNTNGAPK EKTFLKDPSK PPAKAQVVGW PPVRNYRKNV MANQKSGEAE
101: EAMSSGGGTV AFVKVSMDGA PYLRKVDLKM YTSYKDLSDA LAKMFSSFTM GSYGAQGMID FMNESKVMDL LNSSEYVPSY EDKDGDWMLV GDVPWPMFVE
201: SCKRLRIMKG SEAIGLAPRA MEKFKNRS

Arabidopsis Description

IAA14indole-3-acetic acid inducible 14 [Source:TAIR;Acc:AT4G14550]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.