Factsheet for TraesCS7B01G256100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G351400.1	Wheat	cytosol, nucleus, plastid	97.24	97.78
TraesCS7A01G371500.1	Wheat	cytosol, nucleus, plastid	95.58	95.58
KXG20284	Sorghum	plastid	83.98	81.72
Zm00001d036918_P001	Maize	nucleus	80.66	73.74
HORVU7Hr1G084940.3	Barley	plastid	75.69	72.87
TraesCS1B01G138100.1	Wheat	cytosol	63.54	58.08
TraesCS3B01G140700.1	Wheat	cytosol	60.22	56.48
KRH23505	Soybean	nucleus	53.59	53.01
KRH09810	Soybean	nucleus	54.7	52.38
GSMUA_Achr9P02960_001	Banana	nucleus	57.46	50.24
GSMUA_AchrUn_...	Banana	nucleus	59.12	48.86
PGSC0003DMT400006798	Potato	nucleus	54.14	46.23
VIT_11s0016g04490.t01	Wine grape	cytosol, nucleus, plastid	52.49	43.98
Solyc03g120390.2.1	Tomato	nucleus, plastid	53.59	38.49
GSMUA_Achr4P08960_001	Banana	nucleus	57.46	38.24
TraesCS5B01G446100.1	Wheat	cytosol, mitochondrion, nucleus	37.02	37.85
TraesCS5B01G386800.1	Wheat	nucleus	48.07	37.18
TraesCS5B01G058500.1	Wheat	nucleus	46.96	33.73
TraesCS5B01G381900.1	Wheat	cytosol, mitochondrion, nucleus	46.41	33.2
TraesCS5B01G058800.1	Wheat	cytosol	39.23	33.18
TraesCS7B01G242800.1	Wheat	nucleus	44.2	32.79
TraesCS3B01G181500.1	Wheat	cytosol	43.65	32.24
TraesCS5B01G381800.1	Wheat	nucleus	37.57	32.08
GSMUA_Achr7P13250_001	Banana	nucleus	52.49	31.99
VIT_09s0002g05160.t01	Wine grape	nucleus	51.93	31.97
TraesCS3B01G303900.1	Wheat	nucleus, plastid	41.99	29.69
TraesCS1B01G418400.1	Wheat	nucleus	37.57	27.76

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR000270
InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734	PANTHER:PTHR31734:SF34	SUPFAM:SSF54277
EnsemblPlantsGene:TraesCS7B01G256100	EnsemblPlants:TraesCS7B01G256100.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7B:+:474642958..474643848

Molecular Weight (calculated)

19569.0 Da

IEP (calculated)

6.021

GRAVY (calculated)

-0.429

Length

181 amino acids

Sequence
(BLAST)

001: MSTSSTNSAE SPAVSGLDYD DTALTLALPG SSADDRKRAH HDEHDKPPSP KARAVGWPPV RAYRRNALRE EGACKLVKVA VDGAPYLRKV DLAAHDGYEA
101: LLRALHGMFA PCLAVRGEGE LGSRLVDAAT GTEYVPTYED RDGDWMLVGD VPWKMFVESC KRIRLMKSSE AVNLAPGASS E

Best Arabidopsis Sequence Match ( AT4G14550.1 )
(BLAST)

001: MNLKETELCL GLPGGTETVE SPAKSGVGNK RGFSETVDLK LNLQSNKQGH VDLNTNGAPK EKTFLKDPSK PPAKAQVVGW PPVRNYRKNV MANQKSGEAE
101: EAMSSGGGTV AFVKVSMDGA PYLRKVDLKM YTSYKDLSDA LAKMFSSFTM GSYGAQGMID FMNESKVMDL LNSSEYVPSY EDKDGDWMLV GDVPWPMFVE
201: SCKRLRIMKG SEAIGLAPRA MEKFKNRS

Arabidopsis Description

IAA14indole-3-acetic acid inducible 14 [Source:TAIR;Acc:AT4G14550]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.