Factsheet for HORVU7Hr1G084940.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G351400.1	Wheat	cytosol, nucleus, plastid	75.0	78.33
TraesCS7A01G371500.1	Wheat	cytosol, nucleus, plastid	75.0	77.9
TraesCS7B01G256100.1	Wheat	cytosol, nucleus, plastid	72.87	75.69
KXG20284	Sorghum	plastid	63.83	64.52
Zm00001d036918_P001	Maize	nucleus	60.11	57.07
HORVU1Hr1G025670.3	Barley	nucleus	50.0	47.0
KRH23505	Soybean	nucleus	45.21	46.45
KRH09810	Soybean	nucleus	45.74	45.5
GSMUA_Achr9P02960_001	Banana	nucleus	48.4	43.96
GSMUA_AchrUn_...	Banana	nucleus	50.0	42.92
PGSC0003DMT400006798	Potato	nucleus	45.74	40.57
VIT_11s0016g04490.t01	Wine grape	cytosol, nucleus, plastid	44.68	38.89
HORVU3Hr1G022540.7	Barley	cytosol, nucleus	40.96	35.65
GSMUA_Achr4P08960_001	Banana	nucleus	50.53	34.93
Solyc03g120390.2.1	Tomato	nucleus, plastid	45.74	34.13
HORVU5Hr1G094220.1	Barley	nucleus	42.02	33.33
HORVU3Hr1G031460.1	Barley	cytosol	37.77	30.87
GSMUA_Achr7P13250_001	Banana	nucleus	46.28	29.29
HORVU5Hr1G014300.4	Barley	nucleus	42.55	28.99
VIT_09s0002g05160.t01	Wine grape	nucleus	44.68	28.57
HORVU5Hr1G093580.2	Barley	cytosol, nucleus, peroxisome	42.02	28.11
HORVU5Hr1G106350.2	Barley	plastid	33.51	28.0
HORVU3Hr1G088810.1	Barley	plastid	32.98	26.16
HORVU3Hr1G062160.2	Barley	nucleus, plastid	33.51	24.23
HORVU0Hr1G021630.1	Barley	cytosol, mitochondrion, nucleus	21.81	22.28
HORVU1Hr1G086070.6	Barley	plastid	33.51	20.13
HORVU5Hr1G093640.1	Barley	mitochondrion	32.98	19.75
HORVU5Hr1G014290.1	Barley	mitochondrion	26.06	19.14

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	UniProt:A0A287X5N0	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G084940
EnsemblPlants:HORVU7Hr1G084940.3	InterPro:IPR000270	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734
PANTHER:PTHR31734:SF34	SUPFAM:SSF54277	UniParc:UPI000B46E272	SEG:seg	:	:

Description

Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A287X5N0]

Coordinates

chrchr7H:-:511657244..511658120

Molecular Weight (calculated)

21298.0 Da

IEP (calculated)

11.749

GRAVY (calculated)

-0.562

Length

188 amino acids

Sequence
(BLAST)

001: VDELDQLRRV PGRFRPRLRR HRPHPRPPRL LRRRPQARPP RRARQASLSK VRGLLRLSAR AVGWPPVRAY RRNALREEGA CKLVKVAVDG APYLRKVDLA
101: AHGGYEALLR ALHGMFAPCL AVRGEGELGS RLVDAATGAE YVPTYEDRDG DWMLVGDVPW KMFVESCKRI RLMKSSEAVN LAPRPSSQ

Best Arabidopsis Sequence Match ( AT4G14550.1 )
(BLAST)

001: MNLKETELCL GLPGGTETVE SPAKSGVGNK RGFSETVDLK LNLQSNKQGH VDLNTNGAPK EKTFLKDPSK PPAKAQVVGW PPVRNYRKNV MANQKSGEAE
101: EAMSSGGGTV AFVKVSMDGA PYLRKVDLKM YTSYKDLSDA LAKMFSSFTM GSYGAQGMID FMNESKVMDL LNSSEYVPSY EDKDGDWMLV GDVPWPMFVE
201: SCKRLRIMKG SEAIGLAPRA MEKFKNRS

Arabidopsis Description

IAA14indole-3-acetic acid inducible 14 [Source:TAIR;Acc:AT4G14550]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.