Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- vacuole 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G398400.1 | Wheat | nucleus | 73.8 | 87.5 |
| TraesCS1A01G390200.1 | Wheat | plastid | 72.84 | 87.36 |
| TraesCS1B01G418400.1 | Wheat | nucleus | 64.86 | 82.86 |
| KXG22521 | Sorghum | nucleus | 64.86 | 72.76 |
| Zm00001d009532_P001 | Maize | nucleus | 62.94 | 70.11 |
| Os05t0559400-01 | Rice | nucleus | 61.98 | 69.04 |
| Zm00001d038980_P001 | Maize | cytosol, nucleus, plastid | 61.66 | 66.78 |
| HORVU3Hr1G062160.2 | Barley | nucleus, plastid | 49.2 | 59.23 |
| HORVU3Hr1G088810.1 | Barley | plastid | 36.74 | 48.52 |
| HORVU0Hr1G021630.1 | Barley | cytosol, mitochondrion, nucleus | 28.11 | 47.83 |
| GSMUA_Achr2P15340_001 | Banana | nucleus | 37.06 | 47.35 |
| HORVU3Hr1G031460.1 | Barley | cytosol | 33.87 | 46.09 |
| KRH74730 | Soybean | plastid | 21.73 | 42.24 |
| GSMUA_Achr10P... | Banana | nucleus | 38.98 | 41.78 |
| Solyc03g120500.2.1 | Tomato | nucleus | 35.78 | 40.29 |
| PGSC0003DMT400006548 | Potato | plastid | 32.91 | 39.46 |
| KRH23426 | Soybean | nucleus | 38.02 | 38.76 |
| VIT_09s0002g04080.t01 | Wine grape | nucleus | 39.62 | 38.75 |
| CDY06836 | Canola | nucleus | 30.67 | 38.1 |
| HORVU1Hr1G025670.3 | Barley | nucleus | 24.28 | 38.0 |
| PGSC0003DMT400001013 | Potato | nucleus | 33.87 | 37.99 |
| KRH09902 | Soybean | nucleus | 38.66 | 37.93 |
| Solyc12g007230.1.1 | Tomato | nucleus | 35.46 | 37.63 |
| Bra011082.1-P | Field mustard | nucleus | 34.5 | 37.24 |
| VIT_11s0016g03540.t01 | Wine grape | nucleus | 38.02 | 37.19 |
| KRH60250 | Soybean | nucleus | 32.91 | 35.89 |
| HORVU5Hr1G094220.1 | Barley | nucleus | 27.16 | 35.87 |
| KRH44313 | Soybean | nucleus | 36.74 | 35.71 |
| AT4G29080.1 | Thale cress | nucleus | 34.5 | 35.41 |
| KRH39325 | Soybean | nucleus | 34.5 | 35.18 |
| KRH47242 | Soybean | nucleus | 35.78 | 35.11 |
| HORVU5Hr1G106350.2 | Barley | plastid | 24.92 | 34.67 |
| HORVU7Hr1G084940.3 | Barley | plastid | 20.13 | 33.51 |
| HORVU5Hr1G014300.4 | Barley | nucleus | 29.07 | 32.97 |
| HORVU3Hr1G022540.7 | Barley | cytosol, nucleus | 22.68 | 32.87 |
| HORVU5Hr1G093580.2 | Barley | cytosol, nucleus, peroxisome | 28.75 | 32.03 |
| HORVU5Hr1G014290.1 | Barley | mitochondrion | 25.24 | 30.86 |
| KRH41538 | Soybean | golgi, plasma membrane | 33.55 | 29.41 |
| HORVU5Hr1G093640.1 | Barley | mitochondrion | 29.07 | 28.98 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | UniProt:A0A287GKZ1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:HORVU1Hr1G086070 |
| EnsemblPlants:HORVU1Hr1G086070.6 | InterPro:IPR000270 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 |
| PANTHER:PTHR31734:SF9 | SUPFAM:SSF54277 | SignalP:SignalP-noTM | UniParc:UPI000B461D83 | SEG:seg | : |
Description
Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A287GKZ1]
Coordinates
chrchr1H:-:536783295..536787384
Molecular Weight (calculated)
33026.4 Da
IEP (calculated)
8.314
GRAVY (calculated)
-0.274
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: PLPLPLLFFI ITPHPSLSLS LSGPNKKSSF YTSPPPPRTS FLPSIHPSIH PMPPPNLQAR DYIGLGPAAP SSSCCSSSGE TGPHLALRLG LPGCGSADEA
101: AVDAALTLGP APAPTRGGAK RGFADSLLHR TAGAGGEEDK TKGESPAAGP GAGAPPAAKA QVVGWPPVRS YRKNTLAANA TKTKAESQGR SEAGCCYVKV
201: SMDGAPYLRK VDLKTYSSYD NLSLELEKMF SCFITGKSSS CKTSTRDRLT DGSRADALQD QEYVLTYEDK DADWMLVGDL PWDLFTTTCR KLRIMRGSDA
301: AGMGMLIHIL SCL
101: AVDAALTLGP APAPTRGGAK RGFADSLLHR TAGAGGEEDK TKGESPAAGP GAGAPPAAKA QVVGWPPVRS YRKNTLAANA TKTKAESQGR SEAGCCYVKV
201: SMDGAPYLRK VDLKTYSSYD NLSLELEKMF SCFITGKSSS CKTSTRDRLT DGSRADALQD QEYVLTYEDK DADWMLVGDL PWDLFTTTCR KLRIMRGSDA
301: AGMGMLIHIL SCL
001: MSYRLLSVDK DELVTSPCLK ERNYLGLSDC SSVDSSTIPN VVGKSNLNFK ATELRLGLPE SQSPERETDF GLLSPRTPDE KLLFPLLPSK DNGSATTGHK
101: NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL
201: FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK
301: GSDSIGLAPG AVEKSKNKER V
101: NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL
201: FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK
301: GSDSIGLAPG AVEKSKNKER V
Arabidopsis Description
IAA8Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F4IKE6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.