Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G062160.2 | Barley | nucleus, plastid | 59.92 | 54.62 |
| TraesCS3B01G303900.1 | Wheat | nucleus, plastid | 55.7 | 51.56 |
| TraesCS3D01G269700.1 | Wheat | nucleus, plastid | 56.12 | 51.35 |
| TraesCS3A01G270000.1 | Wheat | nucleus, plastid | 56.54 | 51.34 |
| Os01t0675700-01 | Rice | nucleus | 53.59 | 46.86 |
| KXG33104 | Sorghum | nucleus, plastid | 51.9 | 44.4 |
| Zm00001d043878_P001 | Maize | nucleus, plastid | 50.21 | 44.24 |
| KRH74730 | Soybean | plastid | 26.58 | 39.13 |
| HORVU3Hr1G031460.1 | Barley | cytosol | 36.29 | 37.39 |
| HORVU1Hr1G086070.6 | Barley | plastid | 48.52 | 36.74 |
| GSMUA_Achr2P15340_001 | Banana | nucleus | 37.55 | 36.33 |
| Zm00001d011588_P003 | Maize | nucleus, plastid | 50.63 | 35.19 |
| HORVU0Hr1G021630.1 | Barley | cytosol, mitochondrion, nucleus | 26.58 | 34.24 |
| HORVU7Hr1G084940.3 | Barley | plastid | 26.16 | 32.98 |
| HORVU1Hr1G025670.3 | Barley | nucleus | 27.0 | 32.0 |
| PGSC0003DMT400001013 | Potato | nucleus | 37.55 | 31.9 |
| PGSC0003DMT400006548 | Potato | plastid | 35.02 | 31.8 |
| GSMUA_Achr10P... | Banana | nucleus | 38.82 | 31.51 |
| CDY06836 | Canola | nucleus | 32.91 | 30.95 |
| Solyc03g120500.2.1 | Tomato | nucleus | 35.87 | 30.58 |
| Solyc12g007230.1.1 | Tomato | nucleus | 36.29 | 29.15 |
| Bra011082.1-P | Field mustard | nucleus | 35.44 | 28.97 |
| KRH23426 | Soybean | nucleus | 37.13 | 28.66 |
| Zm00001d024008_P001 | Maize | mitochondrion | 41.77 | 28.45 |
| HORVU3Hr1G022540.7 | Barley | cytosol, nucleus | 25.74 | 28.24 |
| KRH09902 | Soybean | nucleus | 37.97 | 28.21 |
| HORVU5Hr1G106350.2 | Barley | plastid | 26.58 | 28.0 |
| HORVU5Hr1G094220.1 | Barley | nucleus | 27.85 | 27.85 |
| AT4G29080.1 | Thale cress | nucleus | 35.44 | 27.54 |
| HORVU5Hr1G014300.4 | Barley | nucleus | 32.07 | 27.54 |
| KRH60250 | Soybean | nucleus | 33.33 | 27.53 |
| VIT_09s0002g04080.t01 | Wine grape | nucleus | 37.13 | 27.5 |
| KRH44313 | Soybean | nucleus | 37.13 | 27.33 |
| HORVU5Hr1G093580.2 | Barley | cytosol, nucleus, peroxisome | 32.07 | 27.05 |
| KRH39325 | Soybean | nucleus | 35.02 | 27.04 |
| KRH47242 | Soybean | nucleus | 35.87 | 26.65 |
| VIT_11s0016g03540.t01 | Wine grape | nucleus | 35.87 | 26.56 |
| HORVU5Hr1G014290.1 | Barley | mitochondrion | 27.43 | 25.39 |
| KRH41538 | Soybean | golgi, plasma membrane | 33.33 | 22.13 |
| HORVU5Hr1G093640.1 | Barley | mitochondrion | 28.27 | 21.34 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | UniProt:A0A287M5P8 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:HORVU3Hr1G088810 |
| EnsemblPlants:HORVU3Hr1G088810.1 | InterPro:IPR000270 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 |
| PANTHER:PTHR31734:SF16 | SUPFAM:SSF54277 | UniParc:UPI000B465C70 | SEG:seg | : | : |
Description
Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A287M5P8]
Coordinates
chrchr3H:-:625930877..625931858
Molecular Weight (calculated)
23191.8 Da
IEP (calculated)
11.532
GRAVY (calculated)
-0.723
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: RPPGIGVPRP RPRPRRLRGG RRPGAHPRPR PHPPQGRLQA RVPRRLPPPR VLRCRQGRGE AALRGSAGRQ VRFDSSTGPS SLARAQVVGW PPVRNYRKNT
101: LAASASKTKG GDDAAPHYVK VSMDGAPYLR KVDLKTYSSY EDLSMALQKM FSCFITGQSA LRKPSTKDRL TSRSNADSLQ DQEYVLTYED KDADWMLVGD
201: LPWDVLXISX XXXXXXXXXX XXXXXXXXXX XXXXXXX
101: LAASASKTKG GDDAAPHYVK VSMDGAPYLR KVDLKTYSSY EDLSMALQKM FSCFITGQSA LRKPSTKDRL TSRSNADSLQ DQEYVLTYED KDADWMLVGD
201: LPWDVLXISX XXXXXXXXXX XXXXXXXXXX XXXXXXX
001: MSYRLLSVDK DELVTSPCLK ERNYLGLSDC SSVDSSTIPN VVGKSNLNFK ATELRLGLPE SQSPERETDF GLLSPRTPDE KLLFPLLPSK DNGSATTGHK
101: NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL
201: FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK
301: GSDSIGLAPG AVEKSKNKER V
101: NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL
201: FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK
301: GSDSIGLAPG AVEKSKNKER V
Arabidopsis Description
IAA8Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F4IKE6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.