Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 6
- plastid 2
- nucleus 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60250 | Soybean | nucleus | 77.31 | 96.17 |
| KRH74730 | Soybean | plastid | 41.74 | 92.55 |
| KRH39325 | Soybean | nucleus | 59.38 | 69.06 |
| VIT_11s0016g03540.t01 | Wine grape | nucleus | 58.82 | 65.62 |
| GSMUA_Achr10P... | Banana | nucleus | 48.46 | 62.23 |
| KRH34375 | Soybean | cytosol, nucleus | 21.01 | 61.48 |
| GSMUA_Achr9P06290_001 | Banana | nucleus | 47.06 | 61.31 |
| GSMUA_Achr2P15340_001 | Banana | nucleus | 41.74 | 60.82 |
| KRH23426 | Soybean | nucleus | 51.54 | 59.93 |
| GSMUA_Achr10P... | Banana | nucleus | 49.02 | 59.93 |
| PGSC0003DMT400001013 | Potato | nucleus | 46.22 | 59.14 |
| GSMUA_Achr10P... | Banana | nucleus | 45.66 | 58.63 |
| Solyc12g007230.1.1 | Tomato | nucleus | 47.9 | 57.97 |
| GSMUA_Achr6P26730_001 | Banana | nucleus | 44.82 | 57.35 |
| GSMUA_Achr7P10930_001 | Banana | nucleus | 42.3 | 56.55 |
| KRH09902 | Soybean | nucleus | 50.42 | 56.43 |
| GSMUA_Achr3P03400_001 | Banana | nucleus | 49.02 | 56.09 |
| HORVU3Hr1G031460.1 | Barley | cytosol | 35.85 | 55.65 |
| GSMUA_Achr2P09210_001 | Banana | nucleus | 38.66 | 55.65 |
| CDY06836 | Canola | nucleus | 39.22 | 55.56 |
| TraesCS7A01G331100.1 | Wheat | nucleus | 37.25 | 55.42 |
| TraesCS7D01G339300.1 | Wheat | nucleus | 36.97 | 55.0 |
| EER89802 | Sorghum | cytosol | 38.1 | 54.62 |
| Bra011082.1-P | Field mustard | nucleus | 43.98 | 54.14 |
| Zm00001d037774_P001 | Maize | cytosol | 36.97 | 54.1 |
| TraesCS7B01G242800.1 | Wheat | nucleus | 36.97 | 54.1 |
| OQU77659 | Sorghum | nucleus | 37.53 | 53.82 |
| KRG92683 | Soybean | nucleus | 34.17 | 53.74 |
| Os05t0230700-01 | Rice | nucleus | 38.66 | 53.7 |
| KRH34377 | Soybean | nucleus | 35.85 | 53.56 |
| KRH23505 | Soybean | nucleus | 27.45 | 53.55 |
| KRH71338 | Soybean | nucleus | 30.25 | 53.47 |
| AT4G29080.1 | Thale cress | nucleus | 45.66 | 53.44 |
| Os06t0335500-01 | Rice | nucleus | 39.78 | 53.38 |
| Os01t0231000-01 | Rice | nucleus | 37.25 | 50.57 |
| KRG92430 | Soybean | nucleus | 27.45 | 50.52 |
| KRH09810 | Soybean | nucleus | 26.61 | 50.26 |
| TraesCS3B01G181500.1 | Wheat | cytosol | 34.45 | 50.2 |
| KRH69048 | Soybean | nucleus | 26.89 | 50.0 |
| KRH68738 | Soybean | nucleus | 33.89 | 49.79 |
| TraesCS3D01G162700.1 | Wheat | cytosol | 33.05 | 49.79 |
| TraesCS3A01G155200.1 | Wheat | cytosol | 33.89 | 49.39 |
| KRH47514 | Soybean | nucleus | 25.77 | 49.2 |
| KRH32099 | Soybean | nucleus | 34.17 | 49.19 |
| KRG96977 | Soybean | nucleus | 31.65 | 49.13 |
| KRH44313 | Soybean | nucleus | 44.26 | 49.07 |
| KRH75635 | Soybean | nucleus | 43.42 | 49.05 |
| KRH32098 | Soybean | nucleus | 23.81 | 48.85 |
| KRG95616 | Soybean | nucleus | 34.17 | 48.41 |
| KRH09813 | Soybean | nucleus | 25.21 | 48.13 |
| KRH67289 | Soybean | nucleus | 34.17 | 48.03 |
| KRH39524 | Soybean | nucleus | 47.34 | 47.74 |
| KRH44390 | Soybean | nucleus | 26.05 | 47.69 |
| KRH67288 | Soybean | nucleus | 27.45 | 47.57 |
| KRG95613 | Soybean | nucleus | 27.17 | 47.55 |
| KRH47242 | Soybean | nucleus | 42.3 | 47.34 |
| HORVU0Hr1G021630.1 | Barley | cytosol, mitochondrion, nucleus | 24.37 | 47.28 |
| KRH23504 | Soybean | nucleus | 24.93 | 47.09 |
| KRH74432 | Soybean | nucleus | 47.06 | 46.8 |
| KRH45470 | Soybean | nucleus | 44.82 | 45.71 |
| KRH62157 | Soybean | nucleus | 45.38 | 45.0 |
| KRH72523 | Soybean | nucleus | 44.82 | 43.72 |
| KRH16912 | Soybean | nucleus | 44.26 | 43.05 |
| Os05t0559400-01 | Rice | nucleus | 33.05 | 41.99 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 27.17 | 41.99 |
| TraesCS1B01G418400.1 | Wheat | nucleus | 28.57 | 41.63 |
| KRH52867 | Soybean | nucleus | 42.02 | 41.21 |
| TraesCS3B01G303900.1 | Wheat | nucleus, plastid | 29.41 | 41.02 |
| TraesCS1A01G390200.1 | Wheat | plastid | 29.97 | 41.0 |
| Os01t0675700-01 | Rice | nucleus | 31.09 | 40.96 |
| TraesCS3A01G270000.1 | Wheat | nucleus, plastid | 29.69 | 40.61 |
| TraesCS3D01G269700.1 | Wheat | nucleus, plastid | 29.41 | 40.54 |
| TraesCS1D01G398400.1 | Wheat | nucleus | 29.69 | 40.15 |
| Zm00001d009532_P001 | Maize | nucleus | 31.37 | 39.86 |
| Zm00001d038980_P001 | Maize | cytosol, nucleus, plastid | 32.21 | 39.79 |
| KXG22521 | Sorghum | nucleus | 31.09 | 39.78 |
| Zm00001d043878_P001 | Maize | nucleus, plastid | 29.97 | 39.78 |
| HORVU3Hr1G062160.2 | Barley | nucleus, plastid | 28.85 | 39.62 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 36.41 | 39.27 |
| KXG33104 | Sorghum | nucleus, plastid | 29.97 | 38.63 |
| KRH71337 | Soybean | nucleus | 18.21 | 38.24 |
| Zm00001d010411_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 34.73 | 37.69 |
| HORVU1Hr1G086070.6 | Barley | plastid | 29.41 | 33.55 |
| HORVU3Hr1G088810.1 | Barley | plastid | 22.13 | 33.33 |
| Zm00001d011588_P003 | Maize | nucleus, plastid | 29.13 | 30.5 |
| Zm00001d024008_P001 | Maize | mitochondrion | 22.69 | 23.28 |
Protein Annotations
| EntrezGene:100795749 | Gene3D:3.10.20.90 | MapMan:35.1 | EMBL:ACUP02004770 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlantsGene:GLYMA_08G036400 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000270 | UniProt:K7L4R6 | EnsemblPlants:KRH41538 |
| ProteinID:KRH41538 | ProteinID:KRH41538.1 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 |
| PANTHER:PTHR31734:SF39 | SUPFAM:SSF54277 | TMHMM:TMhelix | UniParc:UPI000296CC73 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr8:-:2867809..2870833
Molecular Weight (calculated)
39101.2 Da
IEP (calculated)
8.336
GRAVY (calculated)
-0.091
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MLALPCLLFF LYIIFFSSLK CNWPTLHNRA KRKASFNVVV ILQYHIFSFS FLICVVKQLK VVLMSEALEE VVPSMKGGCE EEGLNLKATE LRLGLPGCES
101: PEREGVFKSV VVSGAKRGFS DAIDGNWNGG GSEKDAAALF SPTSRGAVSV SVSAAKSLTL TATDCTNQPT ALGASVLKET VPHSPKPLHE NKPQISAPAA
201: KAQVVGWPPI RSFRKNSMAS QPQKNDAAAD AEAKSGCLYV KVSMEGAPYL RKVDLNSFTT YKDLSLALEK MFSCFTLSQC GSYGVSSREN LSESRLMDLL
301: HGSEYVLTYE DKDGDWMLVG DVPWEMFTES CKRLRIMKSS EAIGLAPRAM EKCKSRY
101: PEREGVFKSV VVSGAKRGFS DAIDGNWNGG GSEKDAAALF SPTSRGAVSV SVSAAKSLTL TATDCTNQPT ALGASVLKET VPHSPKPLHE NKPQISAPAA
201: KAQVVGWPPI RSFRKNSMAS QPQKNDAAAD AEAKSGCLYV KVSMEGAPYL RKVDLNSFTT YKDLSLALEK MFSCFTLSQC GSYGVSSREN LSESRLMDLL
301: HGSEYVLTYE DKDGDWMLVG DVPWEMFTES CKRLRIMKSS EAIGLAPRAM EKCKSRY
001: MSVSVAAEHD YIGLSEFPTM EATTMSDKTK TRDNNNGLNF KATELRLGLP GSESPERVDS RFLALNKSSC PVSGAKRVFS DAINDSNKWV FSPGSTTATG
101: DVGSGSGPRT SVVKDGKSTT FTKPAVPVKE KKSSATAPAS KAQVVGWPPI RSFRKNSMAS SQSQKPGNNS ETEEAEAKSG PEQPCLYVKV SMEGAPYLRK
201: IDLKTYKSYL ELSSALEKMF SCFTIGQFGS HGGCGRDGLN ESRLTDLLRG SEYVVTYEDK DSDWMLVGDV PWEMFICSCK KLRIMKSSEA IGLAPRVMEK
301: CRSRN
101: DVGSGSGPRT SVVKDGKSTT FTKPAVPVKE KKSSATAPAS KAQVVGWPPI RSFRKNSMAS SQSQKPGNNS ETEEAEAKSG PEQPCLYVKV SMEGAPYLRK
201: IDLKTYKSYL ELSSALEKMF SCFTIGQFGS HGGCGRDGLN ESRLTDLLRG SEYVVTYEDK DSDWMLVGDV PWEMFICSCK KLRIMKSSEA IGLAPRVMEK
301: CRSRN
Arabidopsis Description
IAA27Auxin-responsive protein IAA27 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.