Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22521 | Sorghum | nucleus | 87.9 | 88.53 |
| Zm00001d038980_P001 | Maize | cytosol, nucleus, plastid | 82.21 | 79.93 |
| TraesCS1A01G390200.1 | Wheat | plastid | 71.53 | 77.01 |
| TraesCS1D01G398400.1 | Wheat | nucleus | 71.89 | 76.52 |
| TraesCS1B01G418400.1 | Wheat | nucleus | 65.48 | 75.1 |
| Os05t0559400-01 | Rice | nucleus | 74.73 | 74.73 |
| HORVU1Hr1G086070.6 | Barley | plastid | 70.11 | 62.94 |
| Zm00001d043878_P001 | Maize | nucleus, plastid | 59.07 | 61.71 |
| GSMUA_Achr2P15340_001 | Banana | nucleus | 44.13 | 50.61 |
| Zm00001d037774_P001 | Maize | cytosol | 43.77 | 50.41 |
| Zm00001d011588_P003 | Maize | nucleus, plastid | 58.72 | 48.39 |
| GSMUA_Achr10P... | Banana | nucleus | 47.33 | 45.55 |
| KRH74730 | Soybean | plastid | 24.91 | 43.48 |
| PGSC0003DMT400006548 | Potato | plastid | 40.21 | 43.3 |
| Zm00001d013071_P001 | Maize | nucleus | 27.76 | 43.09 |
| Solyc03g120500.2.1 | Tomato | nucleus | 42.35 | 42.81 |
| KRH23426 | Soybean | nucleus | 45.55 | 41.69 |
| CDY06836 | Canola | nucleus | 37.37 | 41.67 |
| VIT_09s0002g04080.t01 | Wine grape | nucleus | 47.33 | 41.56 |
| KRH09902 | Soybean | nucleus | 46.26 | 40.75 |
| PGSC0003DMT400001013 | Potato | nucleus | 40.21 | 40.5 |
| Zm00001d018973_P001 | Maize | nucleus | 28.83 | 40.1 |
| Zm00001d033976_P002 | Maize | nucleus | 33.81 | 40.08 |
| Bra011082.1-P | Field mustard | nucleus | 41.28 | 40.0 |
| Zm00001d013302_P002 | Maize | nucleus | 32.38 | 39.91 |
| Zm00001d039624_P001 | Maize | nucleus | 30.61 | 39.09 |
| VIT_11s0016g03540.t01 | Wine grape | nucleus | 44.48 | 39.06 |
| KRH60250 | Soybean | nucleus | 39.86 | 39.02 |
| KRH44313 | Soybean | nucleus | 44.13 | 38.51 |
| KRH39325 | Soybean | nucleus | 41.99 | 38.44 |
| AT4G29080.1 | Thale cress | nucleus | 41.64 | 38.36 |
| Solyc12g007230.1.1 | Tomato | nucleus | 40.21 | 38.31 |
| KRH47242 | Soybean | nucleus | 43.42 | 38.24 |
| Zm00001d036918_P001 | Maize | nucleus | 26.33 | 37.37 |
| Zm00001d030993_P001 | Maize | nucleus | 26.33 | 37.19 |
| Zm00001d008749_P002 | Maize | cytosol | 28.83 | 36.99 |
| Zm00001d041418_P001 | Maize | nucleus | 30.25 | 36.96 |
| Zm00001d010411_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 43.06 | 36.78 |
| Zm00001d013707_P001 | Maize | nucleus | 29.18 | 36.61 |
| Zm00001d033319_P001 | Maize | nucleus | 29.18 | 36.28 |
| Zm00001d024008_P001 | Maize | mitochondrion | 41.28 | 33.33 |
| KRH41538 | Soybean | golgi, plasma membrane | 39.86 | 31.37 |
| Zm00001d041416_P001 | Maize | nucleus | 35.94 | 29.36 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 28.47 | 25.0 |
Protein Annotations
| EntrezGene:100304074 | Gene3D:3.10.20.90 | MapMan:35.1 | ProteinID:AQK92052.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| UniProt:B4FZ89 | EMBL:BT042427 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 |
| PANTHER:PTHR31734 | PANTHER:PTHR31734:SF9 | SUPFAM:SSF54277 | UniParc:UPI00017B7A31 | EnsemblPlantsGene:Zm00001d009532 | EnsemblPlants:Zm00001d009532_P001 |
| EnsemblPlants:Zm00001d009532_T001 | SEG:seg | : | : | : | : |
Description
Aux/IAA-transcription factor 36IAA19-auxin-responsive Aux/IAA family member
Coordinates
chr8:-:69164642..69168927
Molecular Weight (calculated)
29522.7 Da
IEP (calculated)
7.634
GRAVY (calculated)
-0.475
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPPPLLEP RDYLGAGATS SCCSSCCSSG REGAGPHLAL RLGLPGSDDS PGRGADTEHA RAHVDAALTL GPGPGPAPPR GSAKRGFADS LDRSAKLDGV
101: AADDAAGGVT RVAGAAAGAP PAAKAQVVGW PPVRSYRKNT LAASATKTNG GDEGRSEAGC CYVKVSMDGA PYLRKVDLKT YSSYEDLSLG LEKMFSCFIT
201: GQNSSCKTSR RDRLTDGSRV DALQDQEYVL TYEDKDADWM LVGDLPWDLF TTFCRKLRIM RGSDAAGMAP PRPPEQTVRN K
101: AADDAAGGVT RVAGAAAGAP PAAKAQVVGW PPVRSYRKNT LAASATKTNG GDEGRSEAGC CYVKVSMDGA PYLRKVDLKT YSSYEDLSLG LEKMFSCFIT
201: GQNSSCKTSR RDRLTDGSRV DALQDQEYVL TYEDKDADWM LVGDLPWDLF TTFCRKLRIM RGSDAAGMAP PRPPEQTVRN K
001: MSYRLLSVDK DELVTSPCLK ERNYLGLSDC SSVDSSTIPN VVGKSNLNFK ATELRLGLPE SQSPERETDF GLLSPRTPDE KLLFPLLPSK DNGSATTGHK
101: NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL
201: FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK
301: GSDSIGLAPG AVEKSKNKER V
101: NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL
201: FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK
301: GSDSIGLAPG AVEKSKNKER V
Arabidopsis Description
IAA8Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F4IKE6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.