Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98076 | Sorghum | cytosol, mitochondrion, nucleus | 88.61 | 89.95 |
| Os07t0182400-01 | Rice | plastid | 67.82 | 62.56 |
| Zm00001d013071_P001 | Maize | nucleus | 55.94 | 62.43 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 37.62 | 60.8 |
| KRH34375 | Soybean | cytosol, nucleus | 33.17 | 54.92 |
| PGSC0003DMT400051896 | Potato | plastid | 41.09 | 54.25 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 45.54 | 53.8 |
| GSMUA_Achr11P... | Banana | nucleus | 46.04 | 53.45 |
| Solyc06g084070.2.1 | Tomato | nucleus, plastid | 41.09 | 53.21 |
| VIT_14s0030g02310.t01 | Wine grape | nucleus | 50.99 | 51.76 |
| VIT_07s0141g00270.t01 | Wine grape | nucleus | 47.52 | 51.61 |
| Solyc06g053840.2.1 | Tomato | nucleus | 48.51 | 51.58 |
| PGSC0003DMT400042074 | Potato | cytosol, nucleus, plastid | 47.52 | 50.53 |
| AT4G14560.1 | Thale cress | nucleus | 41.58 | 50.0 |
| Solyc04g054280.1.1 | Tomato | nucleus | 41.09 | 50.0 |
| AT5G43700.1 | Thale cress | cytosol, extracellular, nucleus | 45.54 | 49.46 |
| CDY32536 | Canola | cytosol, nucleus, plastid | 44.06 | 49.44 |
| Zm00001d041418_P001 | Maize | nucleus | 55.94 | 49.13 |
| Bra023771.1-P | Field mustard | nucleus | 41.58 | 49.12 |
| CDY35493 | Canola | nucleus | 41.58 | 49.12 |
| Solyc09g083280.2.1 | Tomato | nucleus | 47.52 | 48.98 |
| CDY10069 | Canola | nucleus | 44.55 | 48.91 |
| Bra032521.1-P | Field mustard | nucleus | 43.56 | 48.89 |
| PGSC0003DMT400015655 | Potato | nucleus | 47.03 | 48.72 |
| CDY40837 | Canola | nucleus | 41.09 | 48.54 |
| CDX94876 | Canola | nucleus | 41.09 | 48.54 |
| CDX92972 | Canola | nucleus | 41.09 | 48.54 |
| Bra001899.1-P | Field mustard | nucleus | 41.09 | 48.54 |
| Bra015297.1-P | Field mustard | cytosol, nucleus, plastid | 44.55 | 48.39 |
| CDX89833 | Canola | cytosol, nucleus, plastid | 44.55 | 48.39 |
| CDY53735 | Canola | nucleus | 41.09 | 48.26 |
| Bra033890.1-P | Field mustard | nucleus | 41.09 | 48.26 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 45.54 | 48.17 |
| CDY32934 | Canola | cytosol, nucleus, plastid | 45.54 | 48.17 |
| PGSC0003DMT400049677 | Potato | nucleus | 43.56 | 48.09 |
| CDY10692 | Canola | nucleus | 40.59 | 47.67 |
| Bra027504.1-P | Field mustard | nucleus | 45.05 | 47.64 |
| PGSC0003DMT400013662 | Potato | cytosol | 44.55 | 47.37 |
| Zm00001d033319_P001 | Maize | nucleus | 52.97 | 47.35 |
| CDY18213 | Canola | cytosol, nucleus, plastid | 43.56 | 47.31 |
| CDY10346 | Canola | nucleus | 40.1 | 47.09 |
| CDY36883 | Canola | nucleus | 40.1 | 47.09 |
| KRH71338 | Soybean | nucleus | 47.03 | 47.03 |
| Solyc09g065850.2.1 | Tomato | nucleus | 43.07 | 47.03 |
| KRH69048 | Soybean | nucleus | 44.55 | 46.88 |
| VIT_05s0020g04680.t01 | Wine grape | nucleus | 38.61 | 46.43 |
| PGSC0003DMT400034978 | Potato | cytosol, mitochondrion, nucleus | 37.62 | 46.34 |
| Solyc06g008580.2.1 | Tomato | nucleus | 43.56 | 46.32 |
| KRG92430 | Soybean | nucleus | 44.06 | 45.88 |
| Bra039732.1-P | Field mustard | nucleus | 38.61 | 45.61 |
| Zm00001d013707_P001 | Maize | nucleus | 50.0 | 45.09 |
| KRH32098 | Soybean | nucleus | 38.61 | 44.83 |
| KRH67288 | Soybean | nucleus | 45.05 | 44.17 |
| Zm00001d030993_P001 | Maize | nucleus | 43.07 | 43.72 |
| KRG95613 | Soybean | nucleus | 44.06 | 43.63 |
| Zm00001d033976_P002 | Maize | nucleus | 42.08 | 35.87 |
| Zm00001d013302_P002 | Maize | nucleus | 40.1 | 35.53 |
| Zm00001d036918_P001 | Maize | nucleus | 34.65 | 35.35 |
| Zm00001d037774_P001 | Maize | cytosol | 42.57 | 35.25 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 53.47 | 33.75 |
| Zm00001d039624_P001 | Maize | nucleus | 35.64 | 32.73 |
| AT1G04240.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus, plastid | 44.55 | 31.14 |
| AT3G23030.2 | Thale cress | vacuole | 39.6 | 30.65 |
| Zm00001d008749_P002 | Maize | cytosol | 33.17 | 30.59 |
| Zm00001d043878_P001 | Maize | nucleus, plastid | 40.59 | 30.48 |
| Zm00001d009532_P001 | Maize | nucleus | 40.1 | 28.83 |
| Zm00001d038980_P001 | Maize | cytosol, nucleus, plastid | 41.09 | 28.72 |
| Zm00001d010411_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 41.58 | 25.53 |
| Zm00001d011588_P003 | Maize | nucleus, plastid | 40.1 | 23.75 |
| Zm00001d041416_P001 | Maize | nucleus | 39.6 | 23.26 |
| Zm00001d024008_P001 | Maize | mitochondrion | 32.18 | 18.68 |
Protein Annotations
| EntrezGene:100280600 | Gene3D:3.10.20.90 | MapMan:35.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | UniProt:B6SJA9 |
| EMBL:EU952824 | EMBL:EU956100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 | ProteinID:ONM51762.1 | InterPro:PB1_dom | PFAM:PF02309 |
| PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF43 | SUPFAM:SSF54277 | UniParc:UPI000182B2A2 | EnsemblPlantsGene:Zm00001d018973 |
| EnsemblPlants:Zm00001d018973_P001 | EnsemblPlants:Zm00001d018973_T001 | SEG:seg | : | : | : |
Description
Aux/IAA-transcription factor 32IAA24-auxin-responsive Aux/IAA family member
Coordinates
chr7:-:11248578..11249882
Molecular Weight (calculated)
21973.7 Da
IEP (calculated)
7.075
GRAVY (calculated)
-0.705
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MELDADNLSA TELRLGLPGT SSSSSDDWQK KPSPSVGAKR ALDDGTKSEA SGTSPAARDL DFDHDHDTAA PPKAQVVGWP PVRAYRKNTF QAAAAAKKVE
101: QKQKQQQQGG LYVKVSMDGA PYLRKVDLRM YKGYRELREA LDALFTNSFS AAAEGGGDHH QHAIAYEDKD GDLMLAGDVP WDMFISSCKK LRIMKGSASE
201: AR
101: QKQKQQQQGG LYVKVSMDGA PYLRKVDLRM YKGYRELREA LDALFTNSFS AAAEGGGDHH QHAIAYEDKD GDLMLAGDVP WDMFISSCKK LRIMKGSASE
201: AR
001: MEKVDVYDEL VNLKATELRL GLPGTEETVS CGKSNKRVLP EATEKEIEST GKTETASPPK AQIVGWPPVR SYRKNNVQTK KSESEGQGNY VKVSMDGAPY
101: LRKIDLTMYK QYPELMKSLE NMFKFSVGEY FEREGYKGSD FVPTYEDKDG DWMLVGDVPW EMFVSSCKRL RIMKGSEVKG LGCGGL
101: LRKIDLTMYK QYPELMKSLE NMFKFSVGEY FEREGYKGSD FVPTYEDKDG DWMLVGDVPW EMFVSSCKRL RIMKGSEVKG LGCGGL
Arabidopsis Description
IAA4Auxin-responsive protein IAA4 [Source:UniProtKB/Swiss-Prot;Acc:P33077]
SUBAcon: [extracellular,nucleus,cytosol]
SUBAcon: [extracellular,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.