Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 4
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400051896 | Potato | plastid | 91.03 | 92.81 |
| Solyc09g065850.2.1 | Tomato | nucleus | 66.67 | 56.22 |
| GSMUA_Achr9P10690_001 | Banana | cytosol, mitochondrion, nucleus | 48.08 | 55.15 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 42.31 | 52.8 |
| GSMUA_Achr5P03110_001 | Banana | nucleus | 55.77 | 51.79 |
| Solyc06g008580.2.1 | Tomato | nucleus | 62.82 | 51.58 |
| VIT_14s0030g02310.t01 | Wine grape | nucleus | 65.38 | 51.26 |
| Solyc04g054280.1.1 | Tomato | nucleus | 54.49 | 51.2 |
| GSMUA_Achr4P22530_001 | Banana | nucleus | 58.97 | 50.83 |
| Solyc09g083280.2.1 | Tomato | nucleus | 63.46 | 50.51 |
| Solyc06g053840.2.1 | Tomato | nucleus | 60.9 | 50.0 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 52.56 | 47.95 |
| GSMUA_Achr4P21030_001 | Banana | nucleus | 59.62 | 46.97 |
| GSMUA_Achr8P20620_001 | Banana | nucleus | 55.13 | 45.74 |
| GSMUA_Achr11P... | Banana | nucleus | 50.64 | 45.4 |
| Zm00001d013071_P001 | Maize | nucleus | 51.92 | 44.75 |
| Solyc06g008590.2.1 | Tomato | nucleus | 58.97 | 44.23 |
| Os12t0601400-01 | Rice | nucleus | 55.77 | 44.16 |
| TraesCS5B01G446100.1 | Wheat | cytosol, mitochondrion, nucleus | 49.36 | 43.5 |
| Solyc03g120380.2.1 | Tomato | nucleus | 53.21 | 43.23 |
| TraesCS5D01G449400.1 | Wheat | nucleus | 50.0 | 43.09 |
| EER90734 | Sorghum | cytosol, nucleus, plastid | 51.28 | 43.01 |
| EER98076 | Sorghum | cytosol, mitochondrion, nucleus | 53.85 | 42.21 |
| GSMUA_Achr2P12630_001 | Banana | nucleus | 53.85 | 41.38 |
| Solyc06g053830.2.1 | Tomato | nucleus | 57.69 | 41.28 |
| Zm00001d018973_P001 | Maize | nucleus | 53.21 | 41.09 |
| TraesCS5D01G388200.1 | Wheat | nucleus | 55.13 | 40.0 |
| TraesCS5D01G069200.1 | Wheat | cytosol | 54.49 | 39.72 |
| TraesCS5B01G058800.1 | Wheat | cytosol | 54.49 | 39.72 |
| TraesCS5A01G058700.1 | Wheat | cytosol | 54.49 | 39.72 |
| TraesCS5B01G381800.1 | Wheat | nucleus | 52.56 | 38.68 |
| TraesCS5A01G378200.1 | Wheat | nucleus | 52.56 | 38.68 |
| Os03t0633800-01 | Rice | nucleus | 55.13 | 38.05 |
| Os03t0797800-01 | Rice | nucleus | 47.44 | 37.56 |
| Solyc01g097290.2.1 | Tomato | nucleus | 60.26 | 37.45 |
| Zm00001d041418_P001 | Maize | nucleus | 55.13 | 37.39 |
| Solyc09g083290.2.1 | Tomato | nucleus | 56.41 | 37.29 |
| EES16315 | Sorghum | cytosol | 57.05 | 36.48 |
| EER93778 | Sorghum | cytosol, nucleus, plastid | 52.56 | 36.28 |
| Zm00001d013707_P001 | Maize | nucleus | 51.92 | 36.16 |
| Zm00001d033319_P001 | Maize | nucleus | 51.92 | 35.84 |
| Zm00001d030993_P001 | Maize | nucleus | 44.87 | 35.18 |
| Os07t0182400-01 | Rice | plastid | 48.72 | 34.7 |
| Solyc03g120390.2.1 | Tomato | nucleus, plastid | 55.77 | 34.52 |
| HORVU5Hr1G106350.2 | Barley | plastid | 49.36 | 34.22 |
| Solyc03g120500.2.1 | Tomato | nucleus | 58.33 | 32.73 |
| Solyc12g007230.1.1 | Tomato | nucleus | 55.77 | 29.49 |
| HORVU5Hr1G093640.1 | Barley | mitochondrion | 55.77 | 27.71 |
| HORVU5Hr1G014290.1 | Barley | mitochondrion | 44.87 | 27.34 |
| Solyc04g076850.2.1 | Tomato | nucleus | 57.05 | 25.5 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 50.64 | 24.69 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | UniProt:G9HPV3 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 |
| EMBL:JN379432 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF8 |
| SUPFAM:SSF54277 | EnsemblPlantsGene:Solyc06g084070.2 | EnsemblPlants:Solyc06g084070.2.1 | UniParc:UPI000243DBF5 | : | : |
Description
Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:G9HPV3]
Coordinates
chr6:+:49326812..49327639
Molecular Weight (calculated)
17544.0 Da
IEP (calculated)
8.578
GRAVY (calculated)
-0.565
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMAGTELRL GLPGTVPSST SKISNKRCSS HRNNNDEPPQ KAQVVGWPPV RSYRKNILEA SYVKVSMDGA AYLRKIDLNT YKSYPQLLKA LENMFKCSID
101: VYSETDGYNG CNYIPTYEDK DGDWMLAGDV PWDMFINSCK RLRIMKGSEA KGLASL
101: VYSETDGYNG CNYIPTYEDK DGDWMLAGDV PWDMFINSCK RLRIMKGSEA KGLASL
001: MEKVDVYDEL VNLKATELRL GLPGTEETVS CGKSNKRVLP EATEKEIEST GKTETASPPK AQIVGWPPVR SYRKNNVQTK KSESEGQGNY VKVSMDGAPY
101: LRKIDLTMYK QYPELMKSLE NMFKFSVGEY FEREGYKGSD FVPTYEDKDG DWMLVGDVPW EMFVSSCKRL RIMKGSEVKG LGCGGL
101: LRKIDLTMYK QYPELMKSLE NMFKFSVGEY FEREGYKGSD FVPTYEDKDG DWMLVGDVPW EMFVSSCKRL RIMKGSEVKG LGCGGL
Arabidopsis Description
IAA4Auxin-responsive protein IAA4 [Source:UniProtKB/Swiss-Prot;Acc:P33077]
SUBAcon: [extracellular,nucleus,cytosol]
SUBAcon: [extracellular,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.