Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- vacuole 1
- nucleus 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98076 | Sorghum | cytosol, mitochondrion, nucleus | 63.47 | 69.85 |
| Zm00001d018973_P001 | Maize | nucleus | 62.56 | 67.82 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 34.7 | 60.8 |
| KRH34375 | Soybean | cytosol, nucleus | 31.05 | 55.74 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 41.55 | 53.22 |
| Solyc04g054280.1.1 | Tomato | nucleus | 38.81 | 51.2 |
| Os03t0797800-01 | Rice | nucleus | 45.66 | 50.76 |
| Os12t0601400-01 | Rice | nucleus | 45.21 | 50.25 |
| Solyc06g053840.2.1 | Tomato | nucleus | 42.92 | 49.47 |
| PGSC0003DMT400042074 | Potato | cytosol, nucleus, plastid | 42.92 | 49.47 |
| PGSC0003DMT400051896 | Potato | plastid | 34.25 | 49.02 |
| VIT_07s0141g00270.t01 | Wine grape | nucleus | 41.55 | 48.92 |
| GSMUA_Achr11P... | Banana | nucleus | 38.81 | 48.85 |
| Solyc06g084070.2.1 | Tomato | nucleus, plastid | 34.7 | 48.72 |
| CDY32536 | Canola | cytosol, nucleus, plastid | 39.73 | 48.33 |
| AT4G14560.1 | Thale cress | nucleus | 36.99 | 48.21 |
| AT5G43700.1 | Thale cress | cytosol, extracellular, nucleus | 40.64 | 47.85 |
| CDY10069 | Canola | nucleus | 39.73 | 47.28 |
| PGSC0003DMT400049677 | Potato | nucleus | 39.27 | 46.99 |
| PGSC0003DMT400034978 | Potato | cytosol, mitochondrion, nucleus | 35.16 | 46.95 |
| Bra032521.1-P | Field mustard | nucleus | 38.36 | 46.67 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 40.64 | 46.6 |
| CDY53735 | Canola | nucleus | 36.53 | 46.51 |
| Solyc09g083280.2.1 | Tomato | nucleus | 41.55 | 46.43 |
| VIT_14s0030g02310.t01 | Wine grape | nucleus | 42.01 | 46.23 |
| CDY35493 | Canola | nucleus | 36.07 | 46.2 |
| Bra023771.1-P | Field mustard | nucleus | 36.07 | 46.2 |
| PGSC0003DMT400015655 | Potato | nucleus | 41.1 | 46.15 |
| CDY32934 | Canola | cytosol, nucleus, plastid | 40.18 | 46.07 |
| KRH71338 | Soybean | nucleus | 42.47 | 46.04 |
| CDY36883 | Canola | nucleus | 36.07 | 45.93 |
| KRH69048 | Soybean | nucleus | 40.18 | 45.83 |
| Bra015297.1-P | Field mustard | cytosol, nucleus, plastid | 38.81 | 45.7 |
| CDX89833 | Canola | cytosol, nucleus, plastid | 38.81 | 45.7 |
| CDX92972 | Canola | nucleus | 35.62 | 45.61 |
| Bra001899.1-P | Field mustard | nucleus | 35.62 | 45.61 |
| CDX94876 | Canola | nucleus | 35.62 | 45.61 |
| CDY40837 | Canola | nucleus | 35.62 | 45.61 |
| Bra027504.1-P | Field mustard | nucleus | 39.73 | 45.55 |
| Solyc09g065850.2.1 | Tomato | nucleus | 38.36 | 45.41 |
| CDY18213 | Canola | cytosol, nucleus, plastid | 38.36 | 45.16 |
| Bra033890.1-P | Field mustard | nucleus | 35.16 | 44.77 |
| CDY10692 | Canola | nucleus | 35.16 | 44.77 |
| VIT_05s0020g04680.t01 | Wine grape | nucleus | 34.25 | 44.64 |
| Bra039732.1-P | Field mustard | nucleus | 34.7 | 44.44 |
| CDY10346 | Canola | nucleus | 34.7 | 44.19 |
| Os03t0633800-01 | Rice | nucleus | 45.21 | 43.81 |
| PGSC0003DMT400013662 | Potato | cytosol | 37.9 | 43.68 |
| KRH32098 | Soybean | nucleus | 34.7 | 43.68 |
| KRG92430 | Soybean | nucleus | 38.36 | 43.3 |
| Solyc06g008580.2.1 | Tomato | nucleus | 37.44 | 43.16 |
| KRG95613 | Soybean | nucleus | 39.73 | 42.65 |
| KRH67288 | Soybean | nucleus | 39.73 | 42.23 |
| Os05t0230700-01 | Rice | nucleus | 39.73 | 33.85 |
| Os01t0178500-02 | Rice | nucleus | 30.59 | 33.67 |
| Os03t0742900-01 | Rice | vacuole | 36.07 | 33.47 |
| Os06t0335500-01 | Rice | nucleus | 39.27 | 32.33 |
| Os01t0231000-01 | Rice | nucleus | 38.81 | 32.32 |
| Os05t0178600-01 | Rice | nucleus | 31.05 | 32.08 |
| Os03t0633500-01 | Rice | cytosol | 33.33 | 31.33 |
| AT1G04240.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus, plastid | 40.18 | 30.45 |
| Os01t0675700-01 | Rice | nucleus | 37.44 | 30.26 |
| AT3G23030.2 | Thale cress | vacuole | 35.16 | 29.5 |
| Os05t0559400-01 | Rice | nucleus | 37.44 | 29.18 |
| Os12t0601300-01 | Rice | nucleus | 36.07 | 28.52 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EntrezGene:4342573 | EMBL:AK103483 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| ProteinID:BAC83117.1 | ProteinID:BAF20965.1 | ProteinID:BAT00332.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 | EnsemblPlantsGene:Os07g0182400 |
| EnsemblPlants:Os07t0182400-01 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF43 |
| UniProt:Q6ZL57 | SUPFAM:SSF54277 | UniParc:UPI00001BF1F4 | RefSeq:XP_015645192.1 | SEG:seg | : |
Description
IAA24AUX/IAA protein family protein. (Os07t0182400-01)
Coordinates
chr7:-:4355211..4356572
Molecular Weight (calculated)
23048.1 Da
IEP (calculated)
7.769
GRAVY (calculated)
-0.440
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSLRST SCLASAAETD ADNLCLRLGP PGSSITTTTT TGGADPAAKR SLGAKRSLES TDSMASGTGT SAAGDEHDDD TAAPAKAQVV GWPPVRAYRR
101: NTFHQAAAAA AATKKGGDEK QKQQQQGGGL YVKVSMDGAP YLRKVDLKMC KGYRELREAL DLLFTKCFSA TASDGCSDGQ FAIAYEDKDG DLMLVGDVPW
201: EMFISSCKKL RIMKGSEAR
101: NTFHQAAAAA AATKKGGDEK QKQQQQGGGL YVKVSMDGAP YLRKVDLKMC KGYRELREAL DLLFTKCFSA TASDGCSDGQ FAIAYEDKDG DLMLVGDVPW
201: EMFISSCKKL RIMKGSEAR
001: MDEFVNLKET ELRLGLPGTD NVCEAKERVS CCNNNNKRVL STDTEKEIES SSRKTETSPP RKAQIVGWPP VRSYRKNNIQ SKKNESEHEG QGIYVKVSMD
101: GAPYLRKIDL SCYKGYSELL KALEVMFKFS VGEYFERDGY KGSDFVPTYE DKDGDWMLIG DVPWEMFICT CKRLRIMKGS EAKGLGCGV
101: GAPYLRKIDL SCYKGYSELL KALEVMFKFS VGEYFERDGY KGSDFVPTYE DKDGDWMLIG DVPWEMFICT CKRLRIMKGS EAKGLGCGV
Arabidopsis Description
SHY2AUX/IAA transcriptional regulator family protein [Source:TAIR;Acc:AT1G04240]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.