Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g084070.2.1 | Tomato | nucleus, plastid | 92.81 | 91.03 |
| PGSC0003DMT400049677 | Potato | nucleus | 69.28 | 57.92 |
| GSMUA_Achr9P10690_001 | Banana | cytosol, mitochondrion, nucleus | 49.02 | 55.15 |
| PGSC0003DMT400013662 | Potato | cytosol | 67.32 | 54.21 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 43.79 | 53.6 |
| GSMUA_Achr5P03110_001 | Banana | nucleus | 56.21 | 51.19 |
| VIT_14s0030g02310.t01 | Wine grape | nucleus | 66.01 | 50.75 |
| GSMUA_Achr4P22530_001 | Banana | nucleus | 59.48 | 50.28 |
| PGSC0003DMT400015655 | Potato | nucleus | 63.4 | 49.74 |
| PGSC0003DMT400042572 | Potato | nucleus | 34.64 | 49.07 |
| PGSC0003DMT400042074 | Potato | cytosol, nucleus, plastid | 60.78 | 48.95 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 52.94 | 47.37 |
| GSMUA_Achr4P21030_001 | Banana | nucleus | 60.78 | 46.97 |
| GSMUA_Achr8P20620_001 | Banana | nucleus | 56.86 | 46.28 |
| GSMUA_Achr11P... | Banana | nucleus | 51.63 | 45.4 |
| PGSC0003DMT400034978 | Potato | cytosol, mitochondrion, nucleus | 48.37 | 45.12 |
| Os12t0601400-01 | Rice | nucleus | 56.86 | 44.16 |
| Zm00001d013071_P001 | Maize | nucleus | 51.63 | 43.65 |
| PGSC0003DMT400013627 | Potato | nucleus | 59.48 | 42.52 |
| EER98076 | Sorghum | cytosol, mitochondrion, nucleus | 54.9 | 42.21 |
| EER90734 | Sorghum | cytosol, nucleus, plastid | 50.98 | 41.94 |
| TraesCS5B01G446100.1 | Wheat | cytosol, mitochondrion, nucleus | 48.37 | 41.81 |
| PGSC0003DMT400006800 | Potato | mitochondrion | 52.94 | 41.54 |
| PGSC0003DMT400006798 | Potato | nucleus | 57.52 | 41.51 |
| TraesCS5D01G449400.1 | Wheat | nucleus | 49.02 | 41.44 |
| PGSC0003DMT400041976 | Potato | nucleus | 57.52 | 41.31 |
| Zm00001d018973_P001 | Maize | nucleus | 54.25 | 41.09 |
| GSMUA_Achr2P12630_001 | Banana | nucleus | 54.25 | 40.89 |
| TraesCS5A01G058700.1 | Wheat | cytosol | 54.9 | 39.25 |
| TraesCS5B01G058800.1 | Wheat | cytosol | 54.9 | 39.25 |
| TraesCS5D01G069200.1 | Wheat | cytosol | 54.9 | 39.25 |
| TraesCS5D01G388200.1 | Wheat | nucleus | 54.9 | 39.07 |
| TraesCS5B01G381800.1 | Wheat | nucleus | 52.94 | 38.21 |
| TraesCS5A01G378200.1 | Wheat | nucleus | 52.29 | 37.74 |
| Os03t0633800-01 | Rice | nucleus | 55.56 | 37.61 |
| PGSC0003DMT400050101 | Potato | cytosol, nucleus, plastid | 60.78 | 37.35 |
| Zm00001d041418_P001 | Maize | nucleus | 55.56 | 36.96 |
| Zm00001d013707_P001 | Maize | nucleus | 53.59 | 36.61 |
| PGSC0003DMT400015610 | Potato | nucleus | 56.86 | 36.55 |
| Os03t0797800-01 | Rice | nucleus | 47.06 | 36.55 |
| EES16315 | Sorghum | cytosol | 58.17 | 36.48 |
| EER93778 | Sorghum | cytosol, nucleus, plastid | 53.59 | 36.28 |
| Zm00001d033319_P001 | Maize | nucleus | 52.94 | 35.84 |
| Os07t0182400-01 | Rice | plastid | 49.02 | 34.25 |
| PGSC0003DMT400006548 | Potato | plastid | 58.17 | 34.1 |
| Zm00001d030993_P001 | Maize | nucleus | 43.79 | 33.67 |
| HORVU5Hr1G106350.2 | Barley | plastid | 49.02 | 33.33 |
| PGSC0003DMT400001013 | Potato | nucleus | 57.52 | 31.54 |
| HORVU5Hr1G093640.1 | Barley | mitochondrion | 55.56 | 27.07 |
| HORVU5Hr1G014290.1 | Barley | mitochondrion | 45.1 | 26.95 |
| PGSC0003DMT400016356 | Potato | nucleus | 56.86 | 24.93 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 50.33 | 24.06 |
Protein Annotations
| EntrezGene:102590668 | Gene3D:3.10.20.90 | MapMan:35.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 |
| UniProt:M1BSE6 | InterPro:PB1_dom | PFAM:PF02309 | EnsemblPlantsGene:PGSC0003DMG400020139 | PGSC:PGSC0003DMG400020139 | EnsemblPlants:PGSC0003DMT400051896 |
| PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF8 | SUPFAM:SSF54277 | UniParc:UPI000295DA31 | RefSeq:XP_006352755.1 |
| SEG:seg | : | : | : | : | : |
Description
Auxin-induced protein 22B [Source:PGSC_GENE;Acc:PGSC0003DMG400020139]
Coordinates
chr6:+:58890143..58891120
Molecular Weight (calculated)
17102.5 Da
IEP (calculated)
8.432
GRAVY (calculated)
-0.508
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMAGTELRL GLPGTEPSSS TSTSKISNKR PSSHINDEPP PKAQVIGWPP VRSYRKNILE ASYVKVSMDG AAYLRKIDLN IYKSYPQLLK ALENMFKCSI
101: ETEGYNGCNY VPTYEDKDGD WMLAGDVPWD MFINSCKRLR IMKGSEAKGL ASL
101: ETEGYNGCNY VPTYEDKDGD WMLAGDVPWD MFINSCKRLR IMKGSEAKGL ASL
001: MGGLKLRVPL LSPCLFLAFH ASDNTSLSSF NPNFDAPLYI SLSPFLQNSS TSSPRTRTRR RRTRQEEQST QENTQEGNTK IDIDPKAMAY EKVNELNLKD
101: TELCLGLPGR TEKIKEEQEV SCVKSNNKRL FEETRDEEES TPPTKTQIVG WPPVRSSRKN NNSVSYVKVS MDGAPYLRKI DLKTYKNYPE LLKALENMFK
201: VMIGEYCERE GYKGSGFVPT YEDKDGDWML VGDVPWDMFS SSCKRLRIMK GSDAPALDSS L
101: TELCLGLPGR TEKIKEEQEV SCVKSNNKRL FEETRDEEES TPPTKTQIVG WPPVRSSRKN NNSVSYVKVS MDGAPYLRKI DLKTYKNYPE LLKALENMFK
201: VMIGEYCERE GYKGSGFVPT YEDKDGDWML VGDVPWDMFS SSCKRLRIMK GSDAPALDSS L
Arabidopsis Description
IAA2Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ54]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.