Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g008590.2.1 | Tomato | nucleus | 88.78 | 91.35 |
| PGSC0003DMT400041976 | Potato | nucleus | 65.89 | 66.2 |
| PGSC0003DMT400015610 | Potato | nucleus | 67.29 | 60.5 |
| PGSC0003DMT400051896 | Potato | plastid | 42.52 | 59.48 |
| KRG95616 | Soybean | nucleus | 67.76 | 57.54 |
| KRH67289 | Soybean | nucleus | 68.22 | 57.48 |
| GSMUA_Achr8P20610_001 | Banana | nucleus | 64.95 | 56.97 |
| KRH32099 | Soybean | nucleus | 65.89 | 56.85 |
| PGSC0003DMT400050101 | Potato | cytosol, nucleus, plastid | 65.89 | 56.63 |
| GSMUA_Achr9P25550_001 | Banana | nucleus | 64.02 | 56.38 |
| GSMUA_Achr10P... | Banana | nucleus | 63.08 | 56.02 |
| GSMUA_Achr4P21020_001 | Banana | nucleus | 64.02 | 55.24 |
| TraesCS5A01G058600.1 | Wheat | nucleus | 64.49 | 54.55 |
| TraesCS5B01G058500.1 | Wheat | nucleus | 64.02 | 54.37 |
| GSMUA_Achr9P10700_001 | Banana | nucleus | 61.22 | 54.36 |
| TraesCS5D01G069300.1 | Wheat | nucleus | 63.55 | 53.97 |
| PGSC0003DMT400049677 | Potato | nucleus | 45.79 | 53.55 |
| TraesCS5B01G381900.1 | Wheat | cytosol, mitochondrion, nucleus | 60.28 | 50.99 |
| PGSC0003DMT400042572 | Potato | nucleus | 25.7 | 50.93 |
| Os03t0633500-01 | Rice | cytosol | 55.14 | 50.64 |
| Os03t0742900-01 | Rice | vacuole | 55.61 | 50.42 |
| TraesCS5D01G392000.1 | Wheat | nucleus | 54.21 | 50.0 |
| EES17334 | Sorghum | cytosol | 65.42 | 49.82 |
| Zm00001d033976_P002 | Maize | nucleus | 55.14 | 49.79 |
| EER90896 | Sorghum | nucleus | 54.67 | 49.79 |
| TraesCS5A01G382600.1 | Wheat | nucleus | 54.21 | 49.79 |
| HORVU5Hr1G014300.4 | Barley | nucleus | 64.02 | 49.64 |
| OQU91311 | Sorghum | cytosol, mitochondrion, nucleus | 61.22 | 49.62 |
| TraesCS5B01G386800.1 | Wheat | nucleus | 54.21 | 49.57 |
| PGSC0003DMT400006798 | Potato | nucleus | 49.07 | 49.53 |
| PGSC0003DMT400013662 | Potato | cytosol | 43.93 | 49.47 |
| GSMUA_Achr4P22520_001 | Banana | nucleus | 58.41 | 49.41 |
| HORVU5Hr1G094220.1 | Barley | nucleus | 54.21 | 48.95 |
| Os12t0601300-01 | Rice | nucleus | 63.08 | 48.74 |
| PGSC0003DMT400015655 | Potato | nucleus | 44.39 | 48.72 |
| Zm00001d013302_P002 | Maize | nucleus | 51.87 | 48.68 |
| PGSC0003DMT400042074 | Potato | cytosol, nucleus, plastid | 42.06 | 47.37 |
| PGSC0003DMT400034978 | Potato | cytosol, mitochondrion, nucleus | 35.98 | 46.95 |
| KRH71337 | Soybean | nucleus | 35.98 | 45.29 |
| PGSC0003DMT400006548 | Potato | plastid | 55.14 | 45.21 |
| PGSC0003DMT400006800 | Potato | mitochondrion | 40.19 | 44.1 |
| HORVU5Hr1G093580.2 | Barley | cytosol, nucleus, peroxisome | 57.48 | 43.77 |
| PGSC0003DMT400001013 | Potato | nucleus | 51.87 | 39.78 |
| TraesCS5D01G388300.2 | Wheat | cytosol | 58.41 | 39.68 |
| TraesCS5A01G378300.2 | Wheat | cytosol, mitochondrion, nucleus | 56.07 | 39.34 |
| Zm00001d041416_P001 | Maize | nucleus | 59.81 | 37.21 |
| PGSC0003DMT400016356 | Potato | nucleus | 55.14 | 33.81 |
Protein Annotations
| EntrezGene:102587812 | Gene3D:3.10.20.90 | MapMan:35.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 |
| UniProt:M1A336 | InterPro:PB1_dom | PFAM:PF02309 | EnsemblPlantsGene:PGSC0003DMG400005327 | PGSC:PGSC0003DMG400005327 | EnsemblPlants:PGSC0003DMT400013627 |
| PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF28 | SUPFAM:SSF54277 | UniParc:UPI000296E4C0 | RefSeq:XP_006366663.1 |
Description
Auxin-responsive protein IAA16 [Source:PGSC_GENE;Acc:PGSC0003DMG400005327]
Coordinates
chr6:-:1324971..1328658
Molecular Weight (calculated)
24270.2 Da
IEP (calculated)
8.167
GRAVY (calculated)
-0.600
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MIGEEEKSSN KLDFEETELR LGLPGEGRKN VHDDNDTYNV NGKRGFVDLK LNLSSDINNI KNSTLKAPAV KTQIVGWPPV RSFRKNILTS QKLGQESDNI
101: LVKVSMDGAP YLRKVDLNMY KSYQELSDAL AKMFNSFTIV QGMKDFMNER KLMDLLNSSD YVPTYEDKDG DWMLVGDVPW GMFVDSCKRL RIMKGTEAIG
201: LAPRAMEKCK NRNG
101: LVKVSMDGAP YLRKVDLNMY KSYQELSDAL AKMFNSFTIV QGMKDFMNER KLMDLLNSSD YVPTYEDKDG DWMLVGDVPW GMFVDSCKRL RIMKGTEAIG
201: LAPRAMEKCK NRNG
001: MINFEATELR LGLPGGNHGG EMAGKNNGKR GFSETVDLKL NLSSTAMDSV SKVDLENMKE KVVKPPAKAQ VVGWPPVRSF RKNVMSGQKP TTGDATEGND
101: KTSGSSGATS SASACATVAY VKVSMDGAPY LRKIDLKLYK TYQDLSNALS KMFSSFTIGN YGPQGMKDFM NESKLIDLLN GSDYVPTYED KDGDWMLVGD
201: VPWEMFVDSC KRIRIMKGSE AIGLAPRALE KCKNRS
101: KTSGSSGATS SASACATVAY VKVSMDGAPY LRKIDLKLYK TYQDLSNALS KMFSSFTIGN YGPQGMKDFM NESKLIDLLN GSDYVPTYED KDGDWMLVGD
201: VPWEMFVDSC KRIRIMKGSE AIGLAPRALE KCKNRS
Arabidopsis Description
IAA16Auxin-responsive protein IAA16 [Source:UniProtKB/Swiss-Prot;Acc:O24407]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.