Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g053840.2.1 | Tomato | nucleus | 97.37 | 97.37 |
| PGSC0003DMT400015655 | Potato | nucleus | 80.0 | 77.95 |
| KRH34375 | Soybean | cytosol, nucleus | 48.95 | 76.23 |
| PGSC0003DMT400034978 | Potato | cytosol, mitochondrion, nucleus | 62.63 | 72.56 |
| AT4G14560.1 | Thale cress | nucleus | 59.47 | 67.26 |
| CDY36883 | Canola | nucleus | 60.0 | 66.28 |
| CDY32934 | Canola | cytosol, nucleus, plastid | 66.32 | 65.97 |
| KRH69048 | Soybean | nucleus | 66.32 | 65.62 |
| CDX94876 | Canola | nucleus | 58.95 | 65.5 |
| VIT_05s0020g04680.t01 | Wine grape | nucleus | 57.89 | 65.48 |
| Bra027504.1-P | Field mustard | nucleus | 65.79 | 65.44 |
| AT5G43700.1 | Thale cress | cytosol, extracellular, nucleus | 63.68 | 65.05 |
| Bra032521.1-P | Field mustard | nucleus | 61.58 | 65.0 |
| CDY32536 | Canola | cytosol, nucleus, plastid | 61.58 | 65.0 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 65.26 | 64.92 |
| CDX92972 | Canola | nucleus | 58.42 | 64.91 |
| Bra001899.1-P | Field mustard | nucleus | 58.42 | 64.91 |
| CDY10069 | Canola | nucleus | 62.63 | 64.67 |
| Bra033890.1-P | Field mustard | nucleus | 58.42 | 64.53 |
| CDY53735 | Canola | nucleus | 58.42 | 64.53 |
| CDY35493 | Canola | nucleus | 57.89 | 64.33 |
| CDY40837 | Canola | nucleus | 57.89 | 64.33 |
| Bra023771.1-P | Field mustard | nucleus | 57.89 | 64.33 |
| Bra015297.1-P | Field mustard | cytosol, nucleus, plastid | 62.63 | 63.98 |
| CDX89833 | Canola | cytosol, nucleus, plastid | 62.63 | 63.98 |
| CDY10692 | Canola | nucleus | 57.89 | 63.95 |
| KRG92430 | Soybean | nucleus | 64.74 | 63.4 |
| PGSC0003DMT400049677 | Potato | nucleus | 61.05 | 63.39 |
| CDY10346 | Canola | nucleus | 57.37 | 63.37 |
| Bra039732.1-P | Field mustard | nucleus | 56.84 | 63.16 |
| GSMUA_Achr5P03110_001 | Banana | nucleus | 55.79 | 63.1 |
| GSMUA_Achr9P10690_001 | Banana | cytosol, mitochondrion, nucleus | 44.74 | 62.5 |
| CDY18213 | Canola | cytosol, nucleus, plastid | 60.53 | 61.83 |
| PGSC0003DMT400051896 | Potato | plastid | 48.95 | 60.78 |
| GSMUA_Achr4P22530_001 | Banana | nucleus | 56.84 | 59.67 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 52.11 | 57.89 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 37.37 | 56.8 |
| GSMUA_Achr4P21030_001 | Banana | nucleus | 58.95 | 56.57 |
| PGSC0003DMT400013662 | Potato | cytosol | 56.32 | 56.32 |
| GSMUA_Achr11P... | Banana | nucleus | 50.53 | 55.17 |
| GSMUA_Achr2P12630_001 | Banana | nucleus | 58.42 | 54.68 |
| GSMUA_Achr8P20620_001 | Banana | nucleus | 53.68 | 54.26 |
| PGSC0003DMT400042572 | Potato | nucleus | 28.95 | 50.93 |
| Os12t0601400-01 | Rice | nucleus | 52.11 | 50.25 |
| EER98076 | Sorghum | cytosol, mitochondrion, nucleus | 52.11 | 49.75 |
| TraesCS5B01G058800.1 | Wheat | cytosol | 55.79 | 49.53 |
| TraesCS5D01G069200.1 | Wheat | cytosol | 55.26 | 49.07 |
| TraesCS5A01G058700.1 | Wheat | cytosol | 55.26 | 49.07 |
| Zm00001d018973_P001 | Maize | nucleus | 50.53 | 47.52 |
| Zm00001d013071_P001 | Maize | nucleus | 44.74 | 46.96 |
| TraesCS5D01G449400.1 | Wheat | nucleus | 43.68 | 45.86 |
| TraesCS5B01G446100.1 | Wheat | cytosol, mitochondrion, nucleus | 42.63 | 45.76 |
| PGSC0003DMT400006800 | Potato | mitochondrion | 46.84 | 45.64 |
| TraesCS5D01G388200.1 | Wheat | nucleus | 51.58 | 45.58 |
| EER93778 | Sorghum | cytosol, nucleus, plastid | 53.68 | 45.13 |
| TraesCS5A01G378200.1 | Wheat | nucleus | 50.0 | 44.81 |
| Os03t0633800-01 | Rice | nucleus | 53.16 | 44.69 |
| EER90734 | Sorghum | cytosol, nucleus, plastid | 43.68 | 44.62 |
| AT3G23030.2 | Thale cress | vacuole | 61.05 | 44.44 |
| Zm00001d041418_P001 | Maize | nucleus | 53.68 | 44.35 |
| TraesCS5B01G381800.1 | Wheat | nucleus | 48.95 | 43.87 |
| Os07t0182400-01 | Rice | plastid | 49.47 | 42.92 |
| Zm00001d013707_P001 | Maize | nucleus | 50.53 | 42.86 |
| Zm00001d030993_P001 | Maize | nucleus | 44.74 | 42.71 |
| EES16315 | Sorghum | cytosol | 54.21 | 42.21 |
| Os03t0797800-01 | Rice | nucleus | 43.68 | 42.13 |
| PGSC0003DMT400013627 | Potato | nucleus | 47.37 | 42.06 |
| Zm00001d033319_P001 | Maize | nucleus | 50.0 | 42.04 |
| AT1G04240.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus, plastid | 63.68 | 41.87 |
| PGSC0003DMT400041976 | Potato | nucleus | 46.84 | 41.78 |
| PGSC0003DMT400015610 | Potato | nucleus | 50.53 | 40.34 |
| PGSC0003DMT400006798 | Potato | nucleus | 42.11 | 37.74 |
| PGSC0003DMT400050101 | Potato | cytosol, nucleus, plastid | 48.95 | 37.35 |
| HORVU5Hr1G106350.2 | Barley | plastid | 43.68 | 36.89 |
| PGSC0003DMT400006548 | Potato | plastid | 50.0 | 36.4 |
| PGSC0003DMT400001013 | Potato | nucleus | 51.58 | 35.13 |
| HORVU5Hr1G014290.1 | Barley | mitochondrion | 46.84 | 34.77 |
| HORVU5Hr1G093640.1 | Barley | mitochondrion | 53.16 | 32.17 |
| PGSC0003DMT400016356 | Potato | nucleus | 51.05 | 27.79 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 43.68 | 25.94 |
Protein Annotations
| EntrezGene:102586390 | Gene3D:3.10.20.90 | MapMan:35.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 |
| UniProt:M1BCG5 | InterPro:PB1_dom | PFAM:PF02309 | EnsemblPlantsGene:PGSC0003DMG400016317 | PGSC:PGSC0003DMG400016317 | EnsemblPlants:PGSC0003DMT400042074 |
| PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF11 | SUPFAM:SSF54277 | UniParc:UPI00029525A7 | RefSeq:XP_006350661.1 |
Description
LEAUX=ARABIDOPSIS auxin-regulated protein homolog [Source:PGSC_GENE;Acc:PGSC0003DMG400016317]
Coordinates
chr6:+:40015235..40016538
Molecular Weight (calculated)
21221.5 Da
IEP (calculated)
6.069
GRAVY (calculated)
-0.563
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MECVLAHEKD LNLKATELRL GLPGRTDEES DKEIVFNVKN NKRALPEDED CESNSISDSK TPPVAKTQIV GWPPVRSNRK NSFPSKKAEA ECGMYVKVSM
101: DGAPYLRKID LKLCKGYPEL LKALEKMFKL SIGEYSEREG YKGSEFAPAY EDKDGDLMLV GDVPFEMFLS SCKRLRIMKG SEARGLGCGV
101: DGAPYLRKID LKLCKGYPEL LKALEKMFKL SIGEYSEREG YKGSEFAPAY EDKDGDLMLV GDVPFEMFLS SCKRLRIMKG SEARGLGCGV
001: MEKVDVYDEL VNLKATELRL GLPGTEETVS CGKSNKRVLP EATEKEIEST GKTETASPPK AQIVGWPPVR SYRKNNVQTK KSESEGQGNY VKVSMDGAPY
101: LRKIDLTMYK QYPELMKSLE NMFKFSVGEY FEREGYKGSD FVPTYEDKDG DWMLVGDVPW EMFVSSCKRL RIMKGSEVKG LGCGGL
101: LRKIDLTMYK QYPELMKSLE NMFKFSVGEY FEREGYKGSD FVPTYEDKDG DWMLVGDVPW EMFVSSCKRL RIMKGSEVKG LGCGGL
Arabidopsis Description
IAA4Auxin-responsive protein IAA4 [Source:UniProtKB/Swiss-Prot;Acc:P33077]
SUBAcon: [extracellular,nucleus,cytosol]
SUBAcon: [extracellular,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.