Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES17334 | Sorghum | cytosol | 63.08 | 77.22 |
| VIT_14s0081g00010.t01 | Wine grape | nucleus, plastid | 35.47 | 71.76 |
| GSMUA_Achr8P20610_001 | Banana | nucleus | 48.84 | 68.85 |
| GSMUA_Achr10P... | Banana | nucleus | 47.97 | 68.46 |
| GSMUA_Achr4P21020_001 | Banana | nucleus | 48.84 | 67.74 |
| GSMUA_Achr9P25550_001 | Banana | nucleus | 46.8 | 66.26 |
| GSMUA_Achr9P10700_001 | Banana | nucleus | 45.93 | 65.56 |
| GSMUA_Achr4P22520_001 | Banana | nucleus | 47.67 | 64.82 |
| PGSC0003DMT400041976 | Potato | nucleus | 39.24 | 63.38 |
| Os03t0633500-01 | Rice | cytosol | 42.73 | 63.09 |
| TraesCS5B01G381900.1 | Wheat | cytosol, mitochondrion, nucleus | 46.22 | 62.85 |
| VIT_07s0141g00290.t01 | Wine grape | cytosol, nucleus, plastid | 43.02 | 62.18 |
| VIT_05s0020g04690.t01 | Wine grape | cytosol, nucleus, plastid | 43.9 | 62.14 |
| CDY10694 | Canola | mitochondrion | 31.4 | 62.07 |
| Solyc06g008590.2.1 | Tomato | nucleus | 37.5 | 62.02 |
| Solyc06g053830.2.1 | Tomato | nucleus | 39.24 | 61.93 |
| KRG92683 | Soybean | nucleus | 40.7 | 61.67 |
| CDY41894 | Canola | cytosol, nucleus, plastid | 41.28 | 61.47 |
| Bra040122.1-P | Field mustard | nucleus | 40.12 | 61.33 |
| Solyc09g083290.2.1 | Tomato | nucleus | 41.57 | 60.59 |
| AT3G04730.1 | Thale cress | cytosol, nucleus, plastid | 41.57 | 60.59 |
| KRH34377 | Soybean | nucleus | 41.86 | 60.25 |
| Bra040398.1-P | Field mustard | nucleus | 40.41 | 60.17 |
| KRG96977 | Soybean | nucleus | 40.12 | 60.0 |
| PGSC0003DMT400013627 | Potato | nucleus | 37.21 | 59.81 |
| KRH68738 | Soybean | nucleus | 42.15 | 59.67 |
| PGSC0003DMT400015610 | Potato | nucleus | 41.28 | 59.66 |
| CDY21111 | Canola | cytosol, nucleus, plastid | 40.7 | 59.32 |
| PGSC0003DMT400050101 | Potato | cytosol, nucleus, plastid | 42.44 | 58.63 |
| Solyc01g097290.2.1 | Tomato | nucleus | 42.73 | 58.57 |
| CDY30017 | Canola | cytosol, nucleus, plastid | 39.83 | 57.81 |
| KRH67289 | Soybean | nucleus | 42.15 | 57.09 |
| Bra001900.1-P | Field mustard | cytosol, nucleus, plastid | 39.24 | 56.96 |
| CDX92973 | Canola | cytosol, nucleus, plastid | 39.24 | 56.96 |
| AT4G14550.2 | Thale cress | nucleus | 38.66 | 56.84 |
| HORVU5Hr1G093580.2 | Barley | cytosol, nucleus, peroxisome | 46.22 | 56.58 |
| Zm00001d033976_P002 | Maize | nucleus | 38.95 | 56.54 |
| Bra032520.1-P | Field mustard | nucleus | 37.21 | 56.39 |
| AT1G04250.1 | Thale cress | cytosol, nucleus, plastid | 37.5 | 56.33 |
| CDY18214 | Canola | nucleus | 36.63 | 56.25 |
| CDX89832 | Canola | nucleus | 36.63 | 56.25 |
| CDY10068 | Canola | cytosol, nucleus, plastid | 37.21 | 56.14 |
| CDY32537 | Canola | nucleus | 37.21 | 56.14 |
| KRG95616 | Soybean | nucleus | 40.99 | 55.95 |
| Bra015298.1-P | Field mustard | nucleus | 36.34 | 55.8 |
| Bra039855.1-P | Field mustard | nucleus | 37.79 | 55.79 |
| CDY47148 | Canola | nucleus | 37.79 | 55.79 |
| CDY62130 | Canola | cytosol, nucleus, plastid | 37.79 | 55.79 |
| KRH32099 | Soybean | nucleus | 40.12 | 55.65 |
| AT3G23050.1 | Thale cress | cytosol, nucleus, plastid | 39.24 | 55.56 |
| CDY15493 | Canola | cytosol, nucleus, plastid | 36.92 | 55.46 |
| Bra030560.1-P | Field mustard | nucleus | 36.92 | 55.46 |
| CDY30781 | Canola | cytosol, nucleus, plastid | 38.37 | 55.0 |
| CDY63910 | Canola | cytosol, nucleus, plastid | 38.37 | 55.0 |
| Bra033886.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 38.37 | 54.55 |
| CDY10349 | Canola | endoplasmic reticulum, extracellular | 38.66 | 54.06 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 36.05 | 53.68 |
| Zm00001d013302_P002 | Maize | nucleus | 35.47 | 53.51 |
| TraesCS5D01G388300.2 | Wheat | cytosol | 47.97 | 52.38 |
| TraesCS5A01G378300.2 | Wheat | cytosol, mitochondrion, nucleus | 45.35 | 51.15 |
| KRH71337 | Soybean | nucleus | 24.42 | 49.41 |
| CDY50750 | Canola | nucleus, plastid | 41.28 | 48.8 |
| Zm00001d039624_P001 | Maize | nucleus | 30.23 | 47.27 |
| Zm00001d008749_P002 | Maize | cytosol | 28.78 | 45.21 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 43.02 | 44.71 |
| Zm00001d013071_P001 | Maize | nucleus | 22.97 | 43.65 |
| Zm00001d041418_P001 | Maize | nucleus | 28.2 | 42.17 |
| Zm00001d033319_P001 | Maize | nucleus | 27.62 | 42.04 |
| Zm00001d037774_P001 | Maize | cytosol | 29.36 | 41.39 |
| Zm00001d036918_P001 | Maize | nucleus | 23.55 | 40.91 |
| Zm00001d013707_P001 | Maize | nucleus | 26.45 | 40.62 |
| Zm00001d018973_P001 | Maize | nucleus | 23.26 | 39.6 |
| Zm00001d030993_P001 | Maize | nucleus | 22.38 | 38.69 |
| Zm00001d043878_P001 | Maize | nucleus, plastid | 28.49 | 36.43 |
| Zm00001d009532_P001 | Maize | nucleus | 29.36 | 35.94 |
| Zm00001d038980_P001 | Maize | cytosol, nucleus, plastid | 28.49 | 33.91 |
| CDY63072 | Canola | nucleus | 36.92 | 31.91 |
| Zm00001d010411_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 30.23 | 31.61 |
| Zm00001d011588_P003 | Maize | nucleus, plastid | 29.65 | 29.91 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 22.38 | 24.06 |
| Zm00001d024008_P001 | Maize | mitochondrion | 23.55 | 23.28 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | UniProt:A0A1D6MVX1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 |
| ProteinID:ONM32956.1 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF28 |
| SUPFAM:SSF54277 | UniParc:UPI000844BE19 | EnsemblPlantsGene:Zm00001d041416 | EnsemblPlants:Zm00001d041416_P001 | EnsemblPlants:Zm00001d041416_T001 | SEG:seg |
Description
Aux/IAA-transcription factor 10Auxin-responsive protein IAA14
Coordinates
chr3:-:118101071..118105468
Molecular Weight (calculated)
36889.9 Da
IEP (calculated)
5.332
GRAVY (calculated)
-0.338
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTTDLGFE ATELRLGLPG GGGGGEPALG GEGRSSSSAS GKRGFAETID LKLKLEPAAV VEAEEEEEDH GVAVALEKEE EAGKMKRSPS QSSVAAAAAA
101: VLADPAEKPR AAKAQVVGWP PVRSFRKNIM SVQSDKGAAA ANGDKSSPAA GGGAAFVKVS LDGAPYLRKV DLKMYRSYQQ LSKALENMFS SFTIGSCGSQ
201: GMNGMNESKL VDLLNGSEYV PTYEDKDGDW MLVGDVPWEM FVESCKRLRI MKGSEAIGLG ELTYMIIIIT NLNNKRDFLG YAKGHGEMQE QKLRRRRTDG
301: SLHLSTTRGG WMQEEQISMA FAALLVSVSY SSSLPFRPLY LPDQ
101: VLADPAEKPR AAKAQVVGWP PVRSFRKNIM SVQSDKGAAA ANGDKSSPAA GGGAAFVKVS LDGAPYLRKV DLKMYRSYQQ LSKALENMFS SFTIGSCGSQ
201: GMNGMNESKL VDLLNGSEYV PTYEDKDGDW MLVGDVPWEM FVESCKRLRI MKGSEAIGLG ELTYMIIIIT NLNNKRDFLG YAKGHGEMQE QKLRRRRTDG
301: SLHLSTTRGG WMQEEQISMA FAALLVSVSY SSSLPFRPLY LPDQ
001: MINFEATELR LGLPGGNHGG EMAGKNNGKR GFSETVDLKL NLSSTAMDSV SKVDLENMKE KVVKPPAKAQ VVGWPPVRSF RKNVMSGQKP TTGDATEGND
101: KTSGSSGATS SASACATVAY VKVSMDGAPY LRKIDLKLYK TYQDLSNALS KMFSSFTIGN YGPQGMKDFM NESKLIDLLN GSDYVPTYED KDGDWMLVGD
201: VPWEMFVDSC KRIRIMKGSE AIGLAPRALE KCKNRS
101: KTSGSSGATS SASACATVAY VKVSMDGAPY LRKIDLKLYK TYQDLSNALS KMFSSFTIGN YGPQGMKDFM NESKLIDLLN GSDYVPTYED KDGDWMLVGD
201: VPWEMFVDSC KRIRIMKGSE AIGLAPRALE KCKNRS
Arabidopsis Description
IAA16Auxin-responsive protein IAA16 [Source:UniProtKB/Swiss-Prot;Acc:O24407]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.