Factsheet for Bra039855.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47148	Canola	nucleus	99.14	99.14
CDY62130	Canola	cytosol, nucleus, plastid	97.85	97.85
AT4G14550.2	Thale cress	nucleus	78.54	78.21
Bra001900.1-P	Field mustard	cytosol, nucleus, plastid	77.25	75.95
Bra033886.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	77.68	74.79
KRH34377	Soybean	nucleus	72.1	70.29
VIT_05s0020g04690.t01	Wine grape	cytosol, nucleus, plastid	72.1	69.14
Bra015298.1-P	Field mustard	nucleus	65.24	67.86
Bra032520.1-P	Field mustard	nucleus	66.09	67.84
Bra030560.1-P	Field mustard	nucleus	66.52	67.69
Solyc09g083290.2.1	Tomato	nucleus	66.95	66.1
PGSC0003DMT400015610	Potato	nucleus	67.38	65.97
Bra040398.1-P	Field mustard	nucleus	62.23	62.77
GSMUA_Achr10P...	Banana	nucleus	62.23	60.17
Bra040122.1-P	Field mustard	nucleus	57.51	59.56
GSMUA_Achr8P20610_001	Banana	nucleus	61.8	59.02
GSMUA_Achr9P25550_001	Banana	nucleus	60.09	57.61
GSMUA_Achr4P21020_001	Banana	nucleus	60.52	56.85
GSMUA_Achr9P10700_001	Banana	nucleus	58.8	56.85
Os03t0742900-01	Rice	vacuole	55.79	55.08
EER90896	Sorghum	nucleus	54.51	54.04
TraesCS5D01G392000.1	Wheat	nucleus	53.65	53.88
Zm00001d033976_P002	Maize	nucleus	54.51	53.59
TraesCS5D01G069300.1	Wheat	nucleus	57.94	53.57
TraesCS5B01G058500.1	Wheat	nucleus	57.94	53.57
TraesCS5B01G386800.1	Wheat	nucleus	53.65	53.42
TraesCS5A01G058600.1	Wheat	nucleus	57.94	53.36
TraesCS5A01G382600.1	Wheat	nucleus	53.22	53.22
Bra033890.1-P	Field mustard	nucleus	39.06	52.91
HORVU5Hr1G094220.1	Barley	nucleus	53.65	52.74
Bra023771.1-P	Field mustard	nucleus	38.63	52.63
Bra001899.1-P	Field mustard	nucleus	38.63	52.63
Bra015297.1-P	Field mustard	cytosol, nucleus, plastid	41.63	52.15
KRG92429	Soybean	cytosol, nucleus, plastid	73.82	51.96
Zm00001d013302_P002	Maize	nucleus	50.21	51.32
GSMUA_Achr4P22520_001	Banana	nucleus	54.94	50.59
Bra039732.1-P	Field mustard	nucleus	36.91	50.29
EES17334	Sorghum	cytosol	60.09	49.82
Os03t0633500-01	Rice	cytosol	49.79	49.79
Bra027504.1-P	Field mustard	nucleus	40.77	49.74
Bra032521.1-P	Field mustard	nucleus	38.2	49.44
HORVU5Hr1G014300.4	Barley	nucleus	58.37	49.28
OQU91311	Sorghum	cytosol, mitochondrion, nucleus	55.79	49.24
Bra037824.1-P	Field mustard	plastid	41.2	49.23
Os12t0601300-01	Rice	nucleus	57.94	48.74
TraesCS5B01G381900.1	Wheat	cytosol, mitochondrion, nucleus	52.79	48.62
Bra026755.1-P	Field mustard	nucleus	31.76	47.44
Bra001598.1-P	Field mustard	nucleus	38.63	46.39
Bra027232.1-P	Field mustard	nucleus	37.34	44.85
Bra024406.1-P	Field mustard	nucleus	44.21	44.21
Bra021117.1-P	Field mustard	cytosol, nucleus, plastid	36.91	43.65
HORVU5Hr1G093580.2	Barley	cytosol, nucleus, peroxisome	50.21	41.64
Bra018993.1-P	Field mustard	nucleus	35.62	40.89
Bra011082.1-P	Field mustard	nucleus	49.79	40.0
Bra030219.1-P	Field mustard	nucleus	45.06	39.47
TraesCS5D01G388300.2	Wheat	cytosol	51.93	38.41
Zm00001d041416_P001	Maize	nucleus	55.79	37.79
Bra031850.1-P	Field mustard	mitochondrion	47.21	37.67
TraesCS5A01G378300.2	Wheat	cytosol, mitochondrion, nucleus	48.93	37.38

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	EnsemblPlantsGene:Bra039855	EnsemblPlants:Bra039855.1
EnsemblPlants:Bra039855.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734
GO:GO:0009987	InterPro:IPR000270	UniProt:M4FFI1	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745
PANTHER:PTHR31734	PANTHER:PTHR31734:SF89	SUPFAM:SSF54277	UniParc:UPI00025459EB	:	:

Description

AT4G14550 (E=2e-108) IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14); protein binding / transcription factor/ transcription repressor

Coordinates

chrA08:-:6278677..6280559

Molecular Weight (calculated)

25853.3 Da

IEP (calculated)

8.686

GRAVY (calculated)

-0.455

Length

233 amino acids

Sequence
(BLAST)

001: MEQLINLKET ELCLGLPGGP DPVETPTKSC LRNKRGFSEI VELKLGLHST KEGSVDLNVA GAPKEKTLHK DPSKPPAKAQ VVGWPPVRNY RKSVMTHQKC
101: SEVEEASSDR GGGTVAFVKV SMDGAPYLRK VDLKMYKSYK ELSDALAKMF SSFTMGSYGA QGMIDFMNES KVMDLVNSSD YVPSYEDKDG DWMLVGDVPW
201: PMFIESCKRL RIMKGSEAIG LAPRAMQKCK NRF

Best Arabidopsis Sequence Match ( AT4G14550.1 )
(BLAST)

001: MNLKETELCL GLPGGTETVE SPAKSGVGNK RGFSETVDLK LNLQSNKQGH VDLNTNGAPK EKTFLKDPSK PPAKAQVVGW PPVRNYRKNV MANQKSGEAE
101: EAMSSGGGTV AFVKVSMDGA PYLRKVDLKM YTSYKDLSDA LAKMFSSFTM GSYGAQGMID FMNESKVMDL LNSSEYVPSY EDKDGDWMLV GDVPWPMFVE
201: SCKRLRIMKG SEAIGLAPRA MEKFKNRS

Arabidopsis Description

IAA14indole-3-acetic acid inducible 14 [Source:TAIR;Acc:AT4G14550]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.