Factsheet for Bra011082.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001670.1-P
Bra003484.1-P
Bra007661.1-P
Bra011082.1-P
Bra012190.1-P
Bra014303.1-P
Bra014411.1-P
Bra015289.1-P
Bra015298.1-P
Bra016492.1-P
Bra017362.1-P
Bra018124.1-P
Bra018938.1-P
Bra018993.1-P
Bra021257.1-P
Bra022224.1-P
Bra024406.1-P
Bra025775.1-P
Bra026166.1-P
Bra026755.1-P
Bra027504.1-P
Bra027944.1-P
Bra028110.1-P
Bra030560.1-P
Bra032520.1-P
Bra034234.1-P
Bra037824.1-P
Bra039732.1-P
Bra040122.1-P
Bra040398.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G29080.1	Bra015289.1-P	AT1G04100.1	21734647
AT4G29080.1	Bra015298.1-P	AT1G04250.1	21734647
AT4G29080.1	Bra030560.1-P	AT1G04250.1	21734647
AT4G29080.1	Bra032520.1-P	AT1G04250.1	21734647
AT4G29080.1	Bra026166.1-P	AT1G15050.1	21734647
AT4G29080.1	Bra026755.1-P	AT1G15580.1	21734647
AT4G29080.1	Bra012190.1-P	AT1G19850.1	21734647
AT4G29080.1	Bra016492.1-P	AT1G19850.1	21734647
AT4G29080.1	Bra025775.1-P	AT1G19850.1	21734647
AT4G29080.1	Bra017362.1-P	AT1G34390.1	21734647
AT4G29080.1	Bra018124.1-P	AT1G34390.1	21734647
AT4G29080.1	Bra027944.1-P	AT1G34390.1	21734647
AT4G29080.1	Bra034234.1-P	AT1G34390.1	21734647
AT4G29080.1	Bra014303.1-P	AT1G51950.1	21734647
AT4G29080.1	Bra018938.1-P	AT1G51950.1	21734647
AT4G29080.1	Bra018993.1-P	AT1G52830.1	21734647
AT4G29080.1	Bra040122.1-P	AT3G04730.1	21734647
AT4G29080.1	Bra040398.1-P	AT3G04730.1	21734647
AT4G29080.1	Bra001670.1-P	AT3G17600.1	21734647
AT4G29080.1	Bra021257.1-P	AT3G17600.1	21734647
AT4G29080.1	Bra022224.1-P	AT3G17600.1	21734647
AT4G29080.1	Bra003484.1-P	AT3G62100.1	21734647
AT4G29080.1	Bra007661.1-P	AT3G62100.1	21734647
AT4G29080.1	Bra014411.1-P	AT3G62100.1	21734647
AT4G29080.1	Bra039732.1-P	AT4G14560.1	21734647
AT4G29080.1	Bra039732.1-P	AT4G14560.1	21798944
AT4G29080.1	Bra011082.1-P	AT4G29080.1	21734647
AT4G29080.1	Bra028110.1-P	AT5G37020.1	21734647
AT4G29080.1	Bra027504.1-P	AT5G43700.1	21734647
AT4G29080.1	Bra024406.1-P	AT5G65670.1	21734647
AT4G29080.1	Bra037824.1-P	AT5G65670.1	21734647

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06836	Canola	nucleus	85.86	98.81
AT4G29080.1	Thale cress	nucleus	88.62	84.26
GSMUA_Achr2P15340_001	Banana	nucleus	52.07	61.63
GSMUA_Achr10P...	Banana	nucleus	57.24	59.71
GSMUA_Achr10P...	Banana	nucleus	55.52	57.91
GSMUA_Achr10P...	Banana	nucleus	57.59	57.19
VIT_11s0016g03540.t01	Wine grape	nucleus	62.76	56.88
KRH39325	Soybean	nucleus	59.66	56.35
Bra001899.1-P	Field mustard	nucleus	33.1	56.14
Bra033890.1-P	Field mustard	nucleus	33.1	55.81
Bra023771.1-P	Field mustard	nucleus	32.76	55.56
GSMUA_Achr7P10930_001	Banana	nucleus	51.03	55.43
GSMUA_Achr9P06290_001	Banana	nucleus	52.07	55.11
KRH60250	Soybean	nucleus	54.48	55.05
TraesCS7A01G331100.1	Wheat	nucleus	45.52	55.0
TraesCS7D01G339300.1	Wheat	nucleus	45.52	55.0
GSMUA_Achr2P09210_001	Banana	nucleus	46.9	54.84
OQU77659	Sorghum	nucleus	46.9	54.62
Bra040398.1-P	Field mustard	nucleus	43.1	54.11
Zm00001d037774_P001	Maize	cytosol	45.52	54.1
TraesCS7B01G242800.1	Wheat	nucleus	45.52	54.1
KRH74730	Soybean	plastid	30.0	54.04
EER89802	Sorghum	cytosol	46.21	53.82
GSMUA_Achr6P26730_001	Banana	nucleus	51.72	53.76
PGSC0003DMT400001013	Potato	nucleus	51.38	53.41
Bra037824.1-P	Field mustard	plastid	35.86	53.33
Os05t0230700-01	Rice	nucleus	47.24	53.31
Bra026755.1-P	Field mustard	nucleus	28.62	53.21
Bra027504.1-P	Field mustard	nucleus	34.83	52.88
Bra015297.1-P	Field mustard	cytosol, nucleus, plastid	33.79	52.69
Os06t0335500-01	Rice	nucleus	48.28	52.63
Bra040122.1-P	Field mustard	nucleus	40.69	52.44
HORVU3Hr1G031460.1	Barley	cytosol	41.38	52.17
Bra039732.1-P	Field mustard	nucleus	30.69	52.05
Solyc12g007230.1.1	Tomato	nucleus	52.76	51.86
Bra032521.1-P	Field mustard	nucleus	32.07	51.67
Bra030219.1-P	Field mustard	nucleus	47.24	51.5
GSMUA_Achr3P03400_001	Banana	nucleus	54.83	50.96
Bra030560.1-P	Field mustard	nucleus	40.0	50.66
Os01t0231000-01	Rice	nucleus	45.86	50.57
HORVU0Hr1G021630.1	Barley	cytosol, mitochondrion, nucleus	31.72	50.0
TraesCS3B01G181500.1	Wheat	cytosol	42.07	49.8
TraesCS3D01G162700.1	Wheat	cytosol	40.69	49.79
Bra039855.1-P	Field mustard	nucleus	40.0	49.79
Bra032520.1-P	Field mustard	nucleus	38.97	49.78
TraesCS3A01G155200.1	Wheat	cytosol	41.72	49.39
Bra001900.1-P	Field mustard	cytosol, nucleus, plastid	40.34	49.37
Bra015298.1-P	Field mustard	nucleus	37.59	48.66
Bra033886.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	40.34	48.35
Bra024406.1-P	Field mustard	nucleus	37.59	46.78
Bra001598.1-P	Field mustard	nucleus	30.34	45.36
TraesCS3B01G303900.1	Wheat	nucleus, plastid	40.0	45.31
TraesCS3A01G270000.1	Wheat	nucleus, plastid	40.34	44.83
TraesCS3D01G269700.1	Wheat	nucleus, plastid	40.0	44.79
Bra021117.1-P	Field mustard	cytosol, nucleus, plastid	30.34	44.67
HORVU3Hr1G062160.2	Barley	nucleus, plastid	40.0	44.62
Zm00001d043878_P001	Maize	nucleus, plastid	41.38	44.61
Bra027232.1-P	Field mustard	nucleus	29.66	44.33
Os01t0675700-01	Rice	nucleus	41.38	44.28
KRH41538	Soybean	golgi, plasma membrane	54.14	43.98
KXG33104	Sorghum	nucleus, plastid	41.72	43.68
TraesCS1A01G390200.1	Wheat	plastid	39.31	43.68
TraesCS1B01G418400.1	Wheat	nucleus	36.9	43.67
Bra031850.1-P	Field mustard	mitochondrion	43.79	43.49
Os05t0559400-01	Rice	nucleus	42.07	43.42
Bra018993.1-P	Field mustard	nucleus	30.34	43.35
TraesCS1D01G398400.1	Wheat	nucleus	39.31	43.18
KXG22521	Sorghum	nucleus	40.0	41.58
Zm00001d009532_P001	Maize	nucleus	40.0	41.28
Zm00001d038980_P001	Maize	cytosol, nucleus, plastid	40.0	40.14
Zm00001d010411_P001	Maize	cytosol, endoplasmic reticulum, nucleus	43.79	38.6
HORVU3Hr1G088810.1	Barley	plastid	28.97	35.44
Zm00001d011588_P003	Maize	nucleus, plastid	40.69	34.6
HORVU1Hr1G086070.6	Barley	plastid	37.24	34.5
Zm00001d024008_P001	Maize	mitochondrion	30.0	25.0

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	EnsemblPlantsGene:Bra011082	EnsemblPlants:Bra011082.1
EnsemblPlants:Bra011082.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734
GO:GO:0009987	InterPro:IPR000270	UniProt:M4D3M8	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745
PANTHER:PTHR31734	PANTHER:PTHR31734:SF39	SUPFAM:SSF54277	UniParc:UPI000254572A	SEG:seg	:

Description

AT4G29080 (E=7e-082) PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor

Coordinates

chrA01:+:4043543..4044839

Molecular Weight (calculated)

31738.5 Da

IEP (calculated)

8.024

GRAVY (calculated)

-0.579

Length

290 amino acids

Sequence
(BLAST)

001: MSESVAAEHD YIGLSMEASQ MSDNKTKTRD NNNNKNDDVL NFKATELRLG LPGSESPERV DQRFLPLKSS CPVSGAKRVF SDAINGSTKW VFSPGSATDV
101: KDIKPAVPVK EKKSSAAAAP PASKAQVVGW PPIRSFRKNT MASSQSQKQG GGDNNNSETD GEAKSGAEPC LYVKVSMEGA PYLRKIDLKT YKSYVELSSA
201: LEEMFSCFTI GQFGSHGGCG RDGLNESRLT DLLRGSEYVV TYEDKDSDWM LVGDVPWEMF ICSCKKLRIM KSSEAIGLAP RVMEKCRSRN

Best Arabidopsis Sequence Match ( AT4G29080.1 )
(BLAST)

001: MSVSVAAEHD YIGLSEFPTM EATTMSDKTK TRDNNNGLNF KATELRLGLP GSESPERVDS RFLALNKSSC PVSGAKRVFS DAINDSNKWV FSPGSTTATG
101: DVGSGSGPRT SVVKDGKSTT FTKPAVPVKE KKSSATAPAS KAQVVGWPPI RSFRKNSMAS SQSQKPGNNS ETEEAEAKSG PEQPCLYVKV SMEGAPYLRK
201: IDLKTYKSYL ELSSALEKMF SCFTIGQFGS HGGCGRDGLN ESRLTDLLRG SEYVVTYEDK DSDWMLVGDV PWEMFICSCK KLRIMKSSEA IGLAPRVMEK
301: CRSRN

Arabidopsis Description

IAA27Auxin-responsive protein IAA27 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSY8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.