Factsheet for Bra001670.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra001670.1-P
Bra002368.1-P
Bra006595.1-P
Bra011082.1-P
Bra014303.1-P
Bra017362.1-P
Bra018124.1-P
Bra018296.1-P
Bra018938.1-P
Bra018993.1-P
Bra021257.1-P
Bra022224.1-P
Bra026755.1-P
Bra027944.1-P
Bra028110.1-P
Bra033467.1-P
Bra034234.1-P
Bra035427.1-P
Bra039723.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G17600.1	Bra026755.1-P	AT1G15580.1	21734647
AT3G17600.1	Bra017362.1-P	AT1G35240.1	21734647
AT3G17600.1	Bra018124.1-P	AT1G35240.1	21734647
AT3G17600.1	Bra027944.1-P	AT1G35240.1	21734647
AT3G17600.1	Bra034234.1-P	AT1G35240.1	21734647
AT3G17600.1	Bra014303.1-P	AT1G51950.1	21798944
AT3G17600.1	Bra018938.1-P	AT1G51950.1	21798944
AT3G17600.1	Bra018993.1-P	AT1G52830.1	21798944
AT3G17600.1	Bra035427.1-P	AT1G59750.1	21734647
AT3G17600.1	Bra000214.1-P	AT2G41090.1	17360592
AT3G17600.1	Bra000214.1-P	AT2G41100.1	17360592
AT3G17600.1	Bra001670.1-P	AT3G17600.1	21734647
AT3G17600.1	Bra021257.1-P	AT3G17600.1	21734647
AT3G17600.1	Bra022224.1-P	AT3G17600.1	21734647
AT3G17600.1	Bra018296.1-P	AT3G51920.1	17360592
AT3G17600.1	Bra033467.1-P	AT3G51920.1	17360592
AT3G17600.1	Bra039723.1-P	AT4G14640.1	17360592
AT3G17600.1	Bra011082.1-P	AT4G29080.1	21798944
AT3G17600.1	Bra002368.1-P	AT5G21274.1	17360592
AT3G17600.1	Bra006595.1-P	AT5G21274.1	17360592
AT3G17600.1	Bra028110.1-P	AT5G37020.1	21734647

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82361	Canola	cytosol, plastid	97.97	92.36
CDY71609	Canola	nucleus, plastid	94.59	89.17
AT3G17600.1	Thale cress	nucleus, plastid	83.78	78.48
Bra022224.1-P	Field mustard	nucleus, plastid	83.78	78.48
Bra021257.1-P	Field mustard	cytosol	35.81	73.61
Os01t0286900-01	Rice	nucleus	37.84	48.7
GSMUA_Achr8P29850_001	Banana	nucleus	51.35	43.18
GSMUA_Achr9P16800_001	Banana	nucleus	45.95	39.08
EES00605	Sorghum	nucleus, plastid	50.68	38.86
Zm00001d040541_P001	Maize	nucleus, plastid	45.27	37.02
Zm00001d008201_P001	Maize	cytosol	30.41	34.62
Bra040476.1-P	Field mustard	cytosol, plastid	40.54	34.48
Bra003484.1-P	Field mustard	nucleus, plastid	39.86	34.3
Bra007661.1-P	Field mustard	plastid	39.86	33.33
Os02t0723400-02	Rice	nucleus	39.86	28.78
Bra014411.1-P	Field mustard	nucleus, plastid	23.65	27.78
HORVU1Hr1G017770.6	Barley	cytosol, mitochondrion, vacuole	38.51	27.54
TraesCS1D01G084100.1	Wheat	nucleus, plastid	38.51	27.54
Bra009867.1-P	Field mustard	cytosol	31.08	26.14
Bra036557.1-P	Field mustard	nucleus	30.41	25.71
TraesCS1B01G100300.1	Wheat	plastid	39.86	24.89
TraesCS1A01G082700.2	Wheat	plastid	40.54	22.81
Bra011045.1-P	Field mustard	nucleus	37.16	22.63
Bra022934.1-P	Field mustard	nucleus	33.78	20.66
Bra015326.1-P	Field mustard	nucleus	32.43	20.43
Bra005508.1-P	Field mustard	nucleus	33.11	19.29
Bra018938.1-P	Field mustard	nucleus	32.43	18.97
Bra015289.1-P	Field mustard	nucleus	34.46	18.82
Bra011332.1-P	Field mustard	nucleus	29.05	18.61
Bra014303.1-P	Field mustard	nucleus	32.43	17.78
Bra021184.1-P	Field mustard	nucleus	30.41	16.73
Bra023958.1-P	Field mustard	nucleus	27.03	16.46
Bra022164.1-P	Field mustard	nucleus	31.08	16.14
Bra001634.1-P	Field mustard	nucleus	29.05	15.81
Bra032503.1-P	Field mustard	nucleus	31.76	15.16
Bra024187.1-P	Field mustard	plastid	37.84	14.07

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	EnsemblPlantsGene:Bra001670	EnsemblPlants:Bra001670.1
EnsemblPlants:Bra001670.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734
GO:GO:0009987	InterPro:IPR000270	UniProt:M4CBU0	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745
PANTHER:PTHR31734	PANTHER:PTHR31734:SF3	SUPFAM:SSF54277	UniParc:UPI000254040B	SEG:seg	:

Description

AT3G17600 (E=2e-053) IAA31 | IAA31 (INDOLE-3-ACETIC ACID INDUCIBLE 31); transcription factor

Coordinates

chrA03:-:17781235..17782026

Molecular Weight (calculated)

17277.9 Da

IEP (calculated)

8.848

GRAVY (calculated)

-0.521

Length

148 amino acids

Sequence
(BLAST)

001: MELQFTKHSA SESSVNLSLS LTFPSTSPQR ATKQDWPPIK PRLIDTLKGR RRLLQRDYDT CLFVKVYMEG VPIGRKLDLS TFSGYESLLE NLSHMFNTSI
101: ICGNHRDRKH HVLTYQDTDG DWMMVGDIPW EMFLETVRRL KITKPERC

Best Arabidopsis Sequence Match ( AT3G17600.1 )
(BLAST)

001: MEVSNSCSSF SSSSVDSTKP SPSESSVNLS LSLTFPSTSP QREARQDWPP IKSRLRDTLK GRRLLRRGDD TSLFVKVYME GVPIGRKLDL CVFSGYESLL
101: ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL KITRPERY

Arabidopsis Description

IAA31Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A178V8S2]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.