Factsheet for Bra022934.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84693	Canola	nucleus	100.0	100.0
CDX79522	Canola	nucleus	97.52	95.94
AT2G33310.2	Thale cress	nucleus	91.32	89.47
Bra005508.1-P	Field mustard	nucleus	88.02	83.86
Bra015326.1-P	Field mustard	nucleus	70.66	72.77
Bra032503.1-P	Field mustard	nucleus	69.01	53.87
PGSC0003DMT400003784	Potato	nucleus	58.26	52.03
Solyc09g090910.1.1	Tomato	nucleus	57.85	49.65
PGSC0003DMT400075427	Potato	nucleus	46.69	48.71
Solyc12g096980.1.1	Tomato	nucleus	46.69	48.5
VIT_05s0049g01970.t01	Wine grape	nucleus	61.57	46.42
Bra011045.1-P	Field mustard	nucleus	45.04	44.86
Bra021257.1-P	Field mustard	cytosol	11.98	40.28
Bra015289.1-P	Field mustard	nucleus	39.26	35.06
Bra036557.1-P	Field mustard	nucleus	24.79	34.29
Bra001670.1-P	Field mustard	nucleus	20.66	33.78
Bra009867.1-P	Field mustard	cytosol	23.97	32.95
Bra018938.1-P	Field mustard	nucleus	33.88	32.41
Bra022224.1-P	Field mustard	nucleus, plastid	20.66	31.65
Bra014303.1-P	Field mustard	nucleus	34.71	31.11
Bra021184.1-P	Field mustard	nucleus	32.23	29.0
Bra003484.1-P	Field mustard	nucleus, plastid	20.25	28.49
Bra001634.1-P	Field mustard	nucleus	31.82	28.31
Bra040476.1-P	Field mustard	cytosol, plastid	20.25	28.16
Bra024187.1-P	Field mustard	plastid	45.87	27.89
Bra007661.1-P	Field mustard	plastid	19.83	27.12
Bra022164.1-P	Field mustard	nucleus	31.82	27.02
Bra014411.1-P	Field mustard	nucleus, plastid	12.4	23.81
Bra011332.1-P	Field mustard	nucleus	22.31	23.38
Bra023958.1-P	Field mustard	nucleus	21.49	21.4

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	EnsemblPlantsGene:Bra022934	EnsemblPlants:Bra022934.1
EnsemblPlants:Bra022934.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734
GO:GO:0009987	InterPro:IPR000270	UniProt:M4E2D4	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745
PANTHER:PTHR31734	PANTHER:PTHR31734:SF6	SUPFAM:SSF54277	UniParc:UPI000253FD2A	SEG:seg	:

Description

AT2G33310 (E=1e-098) IAA13 | IAA13; transcription factor

Coordinates

chrA03:-:7837134..7838364

Molecular Weight (calculated)

26252.4 Da

IEP (calculated)

10.137

GRAVY (calculated)

-0.559

Length

242 amino acids

Sequence
(BLAST)

001: MITELEMGKA ESELELGLGL SLGGGTASKI VKPGGGGAWG ERGRLLTAKD FPSVGSKRAA DSASHAGASP PRSSQVVGWP PIGSHRMNSL VNNQATKKED
101: DGKKQAKDDE TKDVTKKVNG KVQVGFIKVN MDGVAIGRKV DLNAHSSYEN LAQTLEDMFF RTSPGTIGLT GQFTKPLRLL DGSSEFVLTY EDKEGDWMLV
201: GDVPWRMFIT SVKRLRVMKT SEANGLAVRH QDPKERQRNK PV

Best Arabidopsis Sequence Match ( AT2G33310.1 )
(BLAST)

001: MITELEMGKG ESELELGLGL SLGGGTAAKI GKSGGGGAWG ERGRLLTAKD FPSVGSKRAA DSASHAGSSP PRSSQVVGWP PIGSHRMNSL VNNQATKSAR
101: EEEEAGKKKV KDDEPKDVTK KVNGKVQVGF IKVNMDGVAI GRKVDLNAHS SYENLAQTLE DMFFRTNPGT VGLTSQFTKP LRLLDGSSEF VLTYEDKEGD
201: WMLVGDVPWR MFINSVKRLR VMKTSEANGL AARNQEPNER QRKQPV

Arabidopsis Description

IAA13Auxin-responsive protein IAA13 [Source:UniProtKB/Swiss-Prot;Acc:Q38831]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.