Factsheet for Bra011045.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35203	Canola	nucleus	96.3	96.3
CDY38374	Canola	nucleus	91.36	93.28
AT4G28640.2	Thale cress	cytosol, nucleus, plastid	79.84	64.24
Bra024187.1-P	Field mustard	plastid	76.95	46.98
Bra022934.1-P	Field mustard	nucleus	44.86	45.04
Bra005508.1-P	Field mustard	nucleus	44.03	42.13
Bra015289.1-P	Field mustard	nucleus	46.91	42.07
Bra015326.1-P	Field mustard	nucleus	40.33	41.7
Bra021257.1-P	Field mustard	cytosol	11.93	40.28
Bra001670.1-P	Field mustard	nucleus	22.63	37.16
Bra022224.1-P	Field mustard	nucleus, plastid	23.87	36.71
Bra036557.1-P	Field mustard	nucleus	26.34	36.57
Bra009867.1-P	Field mustard	cytosol	25.51	35.23
Bra003484.1-P	Field mustard	nucleus, plastid	23.87	33.72
Bra032503.1-P	Field mustard	nucleus	41.15	32.26
Bra040476.1-P	Field mustard	cytosol, plastid	22.22	31.03
Bra014411.1-P	Field mustard	nucleus, plastid	16.05	30.95
Bra007661.1-P	Field mustard	plastid	22.22	30.51
Bra018938.1-P	Field mustard	nucleus	30.86	29.64
Bra021184.1-P	Field mustard	nucleus	31.69	28.62
Bra014303.1-P	Field mustard	nucleus	31.69	28.52
Bra001634.1-P	Field mustard	nucleus	30.86	27.57
Bra022164.1-P	Field mustard	nucleus	30.86	26.32
Bra011332.1-P	Field mustard	nucleus	22.63	23.81
Bra023958.1-P	Field mustard	nucleus	21.4	21.4

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	EnsemblPlantsGene:Bra011045	EnsemblPlants:Bra011045.1
EnsemblPlants:Bra011045.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734
GO:GO:0009987	InterPro:IPR000270	UniProt:M4D3J1	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745
PANTHER:PTHR31734	PANTHER:PTHR31734:SF48	SUPFAM:SSF54277	UniParc:UPI0002545ACF	SEG:seg	:

Description

AT4G28640 (E=2e-093) IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11); transcription factor

Coordinates

chrA01:-:4265051..4266445

Molecular Weight (calculated)

26250.8 Da

IEP (calculated)

5.128

GRAVY (calculated)

-0.501

Length

243 amino acids

Sequence
(BLAST)

001: MEGGSASTLS NDENLVVSSE DSSSPTENGL ELRLTLSLGR KGYRDCRASH ANDDSSSSSS SSPSSLSSRA SVTAGIKRTA DSMAPPTSGQ VVGWPPIRTY
101: RMNSMVNQAK TLAMEDPQQV NRNTNDATKM GSSMFVKVTM DGIPIGREVD LNAHNCYESL SNALEDMFLK PNTVSSTQET DGHLETRLKI LPDGSSGLVL
201: TYEDKEGDWM LVGDVPWRMF IGSVKRLRIM KTSEATGAAK MNL

Best Arabidopsis Sequence Match ( AT4G28640.1 )
(BLAST)

001: MEGGSASGSA SALSNDENLV VSCEDSSSPI GNELELGLTL SLGRKGYRDC RVYADDSSSS SSSSSLSRAS VIAGIKRTAD SMAATSGQVV GWPPIRTYRM
101: NSMVNQAKAS ATEDPNLEIS QAVNKNRSDS TKMRNSMFVK VTMDGIPIGR KIDLNAHKCY ESLSNTLEEM FLKPKLGSRT LETDGHMETP VKILPDGSSG
201: LVLTYEDKEG DWMLVGDVPW GMFIGSVRRL RIMKTSEATG KAQMIL

Arabidopsis Description

IAA11Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A8MR39]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.