Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400003784 | Potato | nucleus | 93.62 | 97.42 |
Solyc12g096980.1.1 | Tomato | nucleus | 53.9 | 65.24 |
AT2G33310.2 | Thale cress | nucleus | 50.71 | 57.89 |
Bra022934.1-P | Field mustard | nucleus | 49.65 | 57.85 |
CDX84693 | Canola | nucleus | 49.65 | 57.85 |
CDY19477 | Canola | nucleus | 47.87 | 57.45 |
CDY17158 | Canola | nucleus | 47.87 | 57.2 |
CDX79522 | Canola | nucleus | 49.65 | 56.91 |
VIT_05s0049g01970.t01 | Wine grape | nucleus | 64.54 | 56.7 |
AT1G04550.2 | Thale cress | cytosol | 47.87 | 56.49 |
CDY59182 | Canola | nucleus | 43.62 | 54.67 |
CDY53196 | Canola | nucleus | 43.62 | 54.19 |
CDY18243 | Canola | nucleus | 43.97 | 53.68 |
Bra005508.1-P | Field mustard | nucleus | 48.23 | 53.54 |
CDX89814 | Canola | nucleus | 44.33 | 53.19 |
Bra015326.1-P | Field mustard | nucleus | 44.33 | 53.19 |
Solyc09g064530.2.1 | Tomato | nucleus | 47.87 | 42.19 |
Bra032503.1-P | Field mustard | nucleus | 43.26 | 39.35 |
Solyc07g008020.2.1 | Tomato | cytosol | 20.21 | 29.08 |
Solyc03g121060.2.1 | Tomato | nucleus | 28.01 | 27.53 |
Solyc06g066020.2.1 | Tomato | cytoskeleton, cytosol, nucleus | 22.34 | 26.03 |
Solyc08g021820.2.1 | Tomato | nucleus | 18.79 | 23.35 |
Protein Annotations
Gene3D:3.10.20.90 | MapMan:35.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 | UniProt:K4CWB7 |
InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF6 | SUPFAM:SSF54277 |
EnsemblPlantsGene:Solyc09g090910.1 | EnsemblPlants:Solyc09g090910.1.1 | UniParc:UPI000276B19C | SEG:seg | : | : |
Description
Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:K4CWB7]
Coordinates
chr9:-:70314836..70317752
Molecular Weight (calculated)
30552.3 Da
IEP (calculated)
8.977
GRAVY (calculated)
-0.659
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPILSEKGT KMEQDYNMGM CSEDETELEL GLGLSLNSGG GGGGVGGKTK KSPWGEYGRI LTAKDFPNGF SAKRSINVGV SGTKRAADFA GSTTEVGSPP
101: TGASQVVGWP PIRAYRMNSL VNQSKVLNAD DEKGVGGNDK KEHSKKKINH GNTKDDAASV KEKGHLGFVK VNMDGLPIGR KVDLNAHTCY ESLAETLEDM
201: FFKSTKSGEK EQATKSFKLL DGSSEFVLTY EDKEGDWMLV GDVPFGMFLN TVKRLRIMRT SEANGLAPRI PQKQEKHKGK PI
101: TGASQVVGWP PIRAYRMNSL VNQSKVLNAD DEKGVGGNDK KEHSKKKINH GNTKDDAASV KEKGHLGFVK VNMDGLPIGR KVDLNAHTCY ESLAETLEDM
201: FFKSTKSGEK EQATKSFKLL DGSSEFVLTY EDKEGDWMLV GDVPFGMFLN TVKRLRIMRT SEANGLAPRI PQKQEKHKGK PI
001: MITELEMGKG ESELELGLGL SLGGGTAAKI GKSGGGGAWG ERGRLLTAKD FPSVGSKRAA DSASHAGSSP PRSSSQVVGW PPIGSHRMNS LVNNQATKSA
101: REEEEAGKKK VKDDEPKDVT KKVNGKVQVG FIKVNMDGVA IGRKVDLNAH SSYENLAQTL EDMFFRTNPG TVGLTSQFTK PLRLLDGSSE FVLTYEDKEG
201: DWMLVGDVPW RMFINSVKRL RVMKTSEANG LAARNQEPNE RQRKQPV
101: REEEEAGKKK VKDDEPKDVT KKVNGKVQVG FIKVNMDGVA IGRKVDLNAH SSYENLAQTL EDMFFRTNPG TVGLTSQFTK PLRLLDGSSE FVLTYEDKEG
201: DWMLVGDVPW RMFINSVKRL RVMKTSEANG LAARNQEPNE RQRKQPV
Arabidopsis Description
IAA13Auxin-responsive protein IAA13 [Source:UniProtKB/Swiss-Prot;Acc:Q38831]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.