Factsheet for AT3G17600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92140	Canola	nucleus, plastid	86.08	86.08
Bra022224.1-P	Field mustard	nucleus, plastid	86.08	86.08
CDX82361	Canola	cytosol, plastid	84.18	84.71
CDX95843	Canola	plastid	82.91	84.52
Bra001670.1-P	Field mustard	nucleus	78.48	83.78
CDY71609	Canola	nucleus, plastid	82.28	82.8
CDY46895	Canola	cytosol	35.44	77.78
Bra021257.1-P	Field mustard	cytosol	34.81	76.39
CDY46058	Canola	plastid	63.29	59.88
Os01t0286900-01	Rice	nucleus	35.44	48.7
GSMUA_Achr8P29850_001	Banana	nucleus	53.8	48.3
GSMUA_Achr9P16800_001	Banana	nucleus	48.73	44.25
EES00605	Sorghum	nucleus, plastid	51.9	42.49
Zm00001d040541_P001	Maize	nucleus, plastid	46.84	40.88
AT2G46990.1	Thale cress	plastid	42.41	38.29
AT3G62100.1	Thale cress	plastid	41.14	37.79
Zm00001d008201_P001	Maize	cytosol	27.85	33.85
Os02t0723400-02	Rice	nucleus	39.87	30.73
TraesCS1D01G084100.1	Wheat	nucleus, plastid	39.87	30.43
HORVU1Hr1G017770.6	Barley	cytosol, mitochondrion, vacuole	37.34	28.5
TraesCS1B01G100300.1	Wheat	plastid	41.14	27.43
AT5G25890.1	Thale cress	nucleus	27.85	25.14
TraesCS1A01G082700.2	Wheat	plastid	41.77	25.1
AT1G04550.2	Thale cress	cytosol	33.54	22.18
AT2G33310.2	Thale cress	nucleus	32.91	21.05
AT4G28640.2	Thale cress	cytosol, nucleus, plastid	39.87	20.86
AT1G04100.1	Thale cress	cytosol	34.18	20.69
AT1G51950.1	Thale cress	nucleus	31.65	18.73
AT3G16500.1	Thale cress	nucleus	31.01	18.22
AT4G32280.1	Thale cress	cytosol	25.32	15.94

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	EntrezGene:821026	UniProt:A0A178V8S2	ProteinID:ADB93680.2	ProteinID:ADB93682.2
ProteinID:ADB93683.2	ProteinID:ADL70804.1	ProteinID:ADL70805.1	ProteinID:ADL70806.1	ProteinID:ADL70807.1	ProteinID:ADL70809.1
ProteinID:ADL70810.1	ProteinID:ADL70811.1	ProteinID:ADL70812.1	ProteinID:AEE75973.1	ArrayExpress:AT3G17600	EnsemblPlantsGene:AT3G17600
RefSeq:AT3G17600	TAIR:AT3G17600	RefSeq:AT3G17600-TAIR-G	EnsemblPlants:AT3G17600.1	TAIR:AT3G17600.1	InterPro:AUX/IAA_dom
InterPro:AUX_IAA	EMBL:AY054274	EMBL:AY669802	Unigene:At.22356	ProteinID:BAB02050.1	EMBL:BT000543
UniProt:D3K0M2	GO:GO:0003674	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009605	GO:GO:0009606	GO:GO:0009628	GO:GO:0009630	GO:GO:0009719	GO:GO:0009733
GO:GO:0009734	GO:GO:0009987	GO:GO:0048364	GO:GO:0048367	Symbol:IAA31	InterPro:IPR000270
RefSeq:NP_188387.1	ProteinID:OAP02091.1	InterPro:PB1_dom	PFAM:PF02309	PO:PO:0000014	PO:PO:0009001
PO:PO:0009005	PO:PO:0009046	PO:PO:0009047	PFscan:PS51745	PANTHER:PTHR31734	PANTHER:PTHR31734:SF3
UniProt:Q8H174	SUPFAM:SSF54277	UniParc:UPI00000A65F3	SEG:seg	:	:

Description

IAA31Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A178V8S2]

Coordinates

chr3:-:6019973..6021147

Molecular Weight (calculated)

18155.6 Da

IEP (calculated)

8.064

GRAVY (calculated)

-0.565

Length

158 amino acids

Sequence
(BLAST)

001: MEVSNSCSSF SSSSVDSTKP SPSESSVNLS LSLTFPSTSP QREARQDWPP IKSRLRDTLK GRRLLRRGDD TSLFVKVYME GVPIGRKLDL CVFSGYESLL
101: ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL KITRPERY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.