Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 4
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022224.1-P | Field mustard | nucleus, plastid | 100.0 | 100.0 |
| CDX95843 | Canola | plastid | 94.3 | 96.13 |
| AT3G17600.1 | Thale cress | nucleus, plastid | 86.08 | 86.08 |
| CDX82361 | Canola | cytosol, plastid | 84.81 | 85.35 |
| CDY71609 | Canola | nucleus, plastid | 83.54 | 84.08 |
| CDY46895 | Canola | cytosol | 36.08 | 79.17 |
| CDY46058 | Canola | plastid | 69.62 | 65.87 |
| GSMUA_Achr8P29850_001 | Banana | nucleus | 55.06 | 49.43 |
| Os01t0286900-01 | Rice | nucleus | 34.81 | 47.83 |
| GSMUA_Achr9P16800_001 | Banana | nucleus | 48.1 | 43.68 |
| EES00605 | Sorghum | nucleus, plastid | 51.9 | 42.49 |
| Zm00001d040541_P001 | Maize | nucleus, plastid | 46.2 | 40.33 |
| CDY25089 | Canola | plastid | 40.51 | 36.99 |
| CDY48005 | Canola | cytosol, plastid | 40.51 | 36.78 |
| CDY27511 | Canola | cytosol, plastid | 40.51 | 36.78 |
| CDY58757 | Canola | plastid | 39.87 | 36.63 |
| CDX67874 | Canola | plastid | 39.87 | 36.42 |
| CDY11402 | Canola | plastid | 39.87 | 35.59 |
| Zm00001d008201_P001 | Maize | cytosol | 27.22 | 33.08 |
| TraesCS1D01G084100.1 | Wheat | nucleus, plastid | 41.77 | 31.88 |
| Os02t0723400-02 | Rice | nucleus | 40.51 | 31.22 |
| HORVU1Hr1G017770.6 | Barley | cytosol, mitochondrion, vacuole | 39.24 | 29.95 |
| CDY51701 | Canola | nucleus | 37.34 | 29.35 |
| TraesCS1B01G100300.1 | Wheat | plastid | 43.04 | 28.69 |
| TraesCS1A01G082700.2 | Wheat | plastid | 44.3 | 26.62 |
| CDX88204 | Canola | cytosol, nucleus, peroxisome | 27.85 | 25.29 |
| CDX80545 | Canola | cytosol, nucleus, plastid | 27.85 | 25.29 |
| CDX87072 | Canola | cytosol | 27.22 | 24.57 |
| CDY38374 | Canola | nucleus | 36.71 | 24.37 |
| CDY35203 | Canola | nucleus | 36.71 | 23.87 |
| CDY18205 | Canola | cytosol, nucleus, plastid | 39.24 | 22.88 |
| CDX89844 | Canola | cytosol, nucleus, plastid | 38.61 | 22.51 |
| CDY19790 | Canola | cytosol | 27.22 | 22.05 |
| CDY53196 | Canola | nucleus | 31.01 | 21.59 |
| CDY19477 | Canola | nucleus | 31.65 | 21.28 |
| CDX89814 | Canola | nucleus | 31.65 | 21.28 |
| CDY18243 | Canola | nucleus | 31.01 | 21.21 |
| CDY17158 | Canola | nucleus | 31.65 | 21.19 |
| CDY59182 | Canola | nucleus | 29.75 | 20.89 |
| CDX84693 | Canola | nucleus | 31.65 | 20.66 |
| CDX79522 | Canola | nucleus | 31.65 | 20.33 |
| CDX68829 | Canola | nucleus | 28.48 | 19.74 |
| CDY33844 | Canola | nucleus | 31.01 | 19.37 |
| CDX87863 | Canola | nucleus | 31.01 | 19.29 |
| CDX75231 | Canola | nucleus | 27.85 | 19.05 |
| CDY22876 | Canola | nucleus | 30.38 | 18.97 |
| CDY46538 | Canola | nucleus | 31.01 | 18.15 |
| CDY53439 | Canola | nucleus | 31.01 | 17.95 |
| CDY13478 | Canola | nucleus | 25.95 | 16.87 |
| CDY43104 | Canola | nucleus | 28.48 | 16.85 |
| CDY34957 | Canola | nucleus | 28.48 | 16.73 |
| CDX72351 | Canola | nucleus | 25.95 | 16.6 |
| CDY64626 | Canola | cytosol | 27.85 | 16.36 |
| CDX82399 | Canola | nucleus | 27.85 | 16.18 |
| CDX75884 | Canola | cytosol | 27.22 | 15.87 |
| CDX92077 | Canola | nucleus | 28.48 | 15.79 |
| CDX92888 | Canola | nucleus | 37.34 | 14.57 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078DS83 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EnsemblPlants:CDX92140 |
| ProteinID:CDX92140 | ProteinID:CDX92140.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00153838001 | InterPro:IPR000270 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 |
| PANTHER:PTHR31734 | PANTHER:PTHR31734:SF3 | SUPFAM:SSF54277 | UniParc:UPI0002547544 | SEG:seg | : |
Description
BnaA05g22670D
Coordinates
chrLK031871:-:482064..483091
Molecular Weight (calculated)
18147.5 Da
IEP (calculated)
9.403
GRAVY (calculated)
-0.641
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSNSYSPY SSSSVDSTKP SPSESSVNLS LSLTFPSTSS QRETSQDWPP IKPRLRDTLK SLRLRQRGYN TALFVKVYME GVPIGRKLDL STFSGYKSLL
101: ENLSHMFDTS VICGTRDRKH HVLTYQDKDG DWMMVGDIPW DMFLETVRRL KITRPERC
101: ENLSHMFDTS VICGTRDRKH HVLTYQDKDG DWMMVGDIPW DMFLETVRRL KITRPERC
001: MEVSNSCSSF SSSSVDSTKP SPSESSVNLS LSLTFPSTSP QREARQDWPP IKSRLRDTLK GRRLLRRGDD TSLFVKVYME GVPIGRKLDL CVFSGYESLL
101: ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL KITRPERY
101: ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL KITRPERY
Arabidopsis Description
IAA31Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A178V8S2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.