Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011082.1-P | Field mustard | nucleus | 98.81 | 85.86 |
| AT4G29080.1 | Thale cress | nucleus | 88.1 | 72.79 |
| CDY10694 | Canola | mitochondrion | 38.49 | 55.75 |
| GSMUA_Achr2P15340_001 | Banana | nucleus | 53.57 | 55.1 |
| CDY40881 | Canola | cytosol | 38.89 | 53.55 |
| KRH74730 | Soybean | plastid | 34.13 | 53.42 |
| CDX92972 | Canola | nucleus | 36.11 | 53.22 |
| CDX94876 | Canola | nucleus | 36.11 | 53.22 |
| CDY10692 | Canola | nucleus | 36.11 | 52.91 |
| CDY36883 | Canola | nucleus | 36.11 | 52.91 |
| CDY35493 | Canola | nucleus | 35.71 | 52.63 |
| CDY40837 | Canola | nucleus | 35.71 | 52.63 |
| CDY41894 | Canola | cytosol, nucleus, plastid | 48.02 | 52.38 |
| CDY10346 | Canola | nucleus | 35.71 | 52.33 |
| GSMUA_Achr10P... | Banana | nucleus | 57.54 | 52.16 |
| CDY53735 | Canola | nucleus | 35.32 | 51.74 |
| CDY21111 | Canola | cytosol, nucleus, plastid | 48.02 | 51.27 |
| GSMUA_Achr10P... | Banana | nucleus | 55.56 | 50.36 |
| GSMUA_Achr10P... | Banana | nucleus | 58.33 | 50.34 |
| CDY32934 | Canola | cytosol, nucleus, plastid | 38.1 | 50.26 |
| GSMUA_Achr7P10930_001 | Banana | nucleus | 53.17 | 50.19 |
| PGSC0003DMT400001013 | Potato | nucleus | 55.56 | 50.18 |
| CDX89833 | Canola | cytosol, nucleus, plastid | 36.9 | 50.0 |
| CDY32536 | Canola | cytosol, nucleus, plastid | 35.71 | 50.0 |
| KRH39325 | Soybean | nucleus | 60.71 | 49.84 |
| CDY30017 | Canola | cytosol, nucleus, plastid | 46.83 | 49.79 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 37.7 | 49.74 |
| VIT_11s0016g03540.t01 | Wine grape | nucleus | 63.1 | 49.69 |
| CDY53305 | Canola | cytosol | 30.95 | 49.68 |
| GSMUA_Achr2P09210_001 | Banana | nucleus | 48.81 | 49.6 |
| KRH60250 | Soybean | nucleus | 56.35 | 49.48 |
| TraesCS7A01G331100.1 | Wheat | nucleus | 46.83 | 49.17 |
| TraesCS7D01G339300.1 | Wheat | nucleus | 46.83 | 49.17 |
| CDY18213 | Canola | cytosol, nucleus, plastid | 36.11 | 48.92 |
| CDY10069 | Canola | nucleus | 35.71 | 48.91 |
| TraesCS7B01G242800.1 | Wheat | nucleus | 46.83 | 48.36 |
| HORVU3Hr1G031460.1 | Barley | cytosol | 44.05 | 48.26 |
| GSMUA_Achr9P06290_001 | Banana | nucleus | 51.98 | 47.81 |
| CDY10068 | Canola | cytosol, nucleus, plastid | 43.25 | 47.81 |
| CDY32537 | Canola | nucleus | 43.25 | 47.81 |
| CDY62130 | Canola | cytosol, nucleus, plastid | 44.05 | 47.64 |
| EER89802 | Sorghum | cytosol | 46.83 | 47.39 |
| OQU77659 | Sorghum | nucleus | 46.83 | 47.39 |
| CDX89832 | Canola | nucleus | 42.06 | 47.32 |
| CDY18214 | Canola | nucleus | 42.06 | 47.32 |
| CDY47148 | Canola | nucleus | 43.65 | 47.21 |
| CDY15493 | Canola | cytosol, nucleus, plastid | 42.86 | 47.16 |
| Zm00001d037774_P001 | Maize | cytosol | 45.63 | 47.13 |
| Os06t0335500-01 | Rice | nucleus | 49.6 | 46.99 |
| CDY50113 | Canola | cytosol, nucleus, plastid | 33.73 | 46.96 |
| CDX92973 | Canola | cytosol, nucleus, plastid | 44.05 | 46.84 |
| Solyc12g007230.1.1 | Tomato | nucleus | 54.76 | 46.78 |
| Os05t0230700-01 | Rice | nucleus | 47.22 | 46.3 |
| GSMUA_Achr6P26730_001 | Banana | nucleus | 50.79 | 45.88 |
| CDY25617 | Canola | nucleus | 47.62 | 45.11 |
| CDX89499 | Canola | nucleus | 48.41 | 45.02 |
| GSMUA_Achr3P03400_001 | Banana | nucleus | 55.56 | 44.87 |
| CDY10349 | Canola | endoplasmic reticulum, extracellular | 43.65 | 44.72 |
| CDY30781 | Canola | cytosol, nucleus, plastid | 42.46 | 44.58 |
| CDY63910 | Canola | cytosol, nucleus, plastid | 42.46 | 44.58 |
| Os01t0231000-01 | Rice | nucleus | 45.63 | 43.73 |
| CDX75834 | Canola | cytosol, nucleus, plastid | 33.33 | 43.3 |
| HORVU0Hr1G021630.1 | Barley | cytosol, mitochondrion, nucleus | 31.35 | 42.93 |
| CDX82428 | Canola | cytosol, nucleus, plastid | 32.94 | 42.78 |
| CDY21845 | Canola | cytosol, extracellular, nucleus | 33.33 | 42.64 |
| TraesCS3B01G181500.1 | Wheat | cytosol | 41.27 | 42.45 |
| TraesCS3D01G162700.1 | Wheat | cytosol | 39.68 | 42.19 |
| CDY20135 | Canola | cytosol, nucleus, plastid | 32.94 | 42.13 |
| TraesCS3A01G155200.1 | Wheat | cytosol | 40.87 | 42.04 |
| CDY50750 | Canola | nucleus, plastid | 48.41 | 41.92 |
| CDY68807 | Canola | nucleus | 32.54 | 41.84 |
| CDY26042 | Canola | nucleus | 32.14 | 41.33 |
| CDY68170 | Canola | nucleus, plastid | 48.81 | 39.55 |
| CDY37837 | Canola | mitochondrion | 46.43 | 39.53 |
| TraesCS3B01G303900.1 | Wheat | nucleus, plastid | 40.08 | 39.45 |
| CDY18679 | Canola | plastid | 48.81 | 39.42 |
| KRH41538 | Soybean | golgi, plasma membrane | 55.56 | 39.22 |
| Os01t0675700-01 | Rice | nucleus | 42.06 | 39.11 |
| TraesCS3D01G269700.1 | Wheat | nucleus, plastid | 40.08 | 39.0 |
| TraesCS1A01G390200.1 | Wheat | plastid | 40.08 | 38.7 |
| TraesCS3A01G270000.1 | Wheat | nucleus, plastid | 40.08 | 38.7 |
| Zm00001d043878_P001 | Maize | nucleus, plastid | 40.87 | 38.29 |
| TraesCS1D01G398400.1 | Wheat | nucleus | 40.08 | 38.26 |
| CDY71748 | Canola | cytosol, nucleus, plastid | 26.19 | 38.15 |
| Os05t0559400-01 | Rice | nucleus | 42.46 | 38.08 |
| HORVU3Hr1G062160.2 | Barley | nucleus, plastid | 39.29 | 38.08 |
| CDY53800 | Canola | nucleus | 28.17 | 37.77 |
| KXG22521 | Sorghum | nucleus | 41.67 | 37.63 |
| TraesCS1B01G418400.1 | Wheat | nucleus | 36.51 | 37.55 |
| KXG33104 | Sorghum | nucleus, plastid | 41.27 | 37.55 |
| Zm00001d009532_P001 | Maize | nucleus | 41.67 | 37.37 |
| CDY66936 | Canola | cytosol, nucleus, plastid | 40.08 | 36.59 |
| Zm00001d038980_P001 | Maize | cytosol, nucleus, plastid | 41.27 | 35.99 |
| CDY45607 | Canola | cytosol, nucleus, plastid | 46.03 | 35.26 |
| CDY08767 | Canola | cytosol, nucleus, plastid | 46.43 | 35.24 |
| Zm00001d010411_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 43.25 | 33.13 |
| HORVU3Hr1G088810.1 | Barley | plastid | 30.95 | 32.91 |
| HORVU1Hr1G086070.6 | Barley | plastid | 38.1 | 30.67 |
| Zm00001d011588_P003 | Maize | nucleus, plastid | 40.08 | 29.62 |
| CDY63072 | Canola | nucleus | 43.25 | 27.39 |
| Zm00001d024008_P001 | Maize | mitochondrion | 34.13 | 24.71 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078F097 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EnsemblPlants:CDY06836 |
| ProteinID:CDY06836 | ProteinID:CDY06836.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00123103001 | InterPro:IPR000270 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 |
| PANTHER:PTHR31734 | PANTHER:PTHR31734:SF39 | SUPFAM:SSF54277 | UniParc:UPI0004EEBC47 | SEG:seg | : |
Description
BnaC01g09350D
Coordinates
chrLK031973:+:731041..732423
Molecular Weight (calculated)
27589.7 Da
IEP (calculated)
8.346
GRAVY (calculated)
-0.558
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAQMSDNK TKTRDNNNNK NDDVLNFKAT ELRLGLPGSE VFSDAINGST KWVFSPGSAT DVKDIKPAVP VKEKKSSAAA APPASKAQVV GWPPIRSFRK
101: NTMASSQSQK QGGGDNNNSE TEGEAKSGAE PCLYVKVSME GAPYLRKIDL KTYKSYVELS SALEEMFSCF TIGQFGSHGG CGRDGLNESR LTDLLRGSEY
201: VVTYEDKDSV WMLVGDVPWE MFICSCKKLR IMKSSEAIGL APRVMEKCRS RN
101: NTMASSQSQK QGGGDNNNSE TEGEAKSGAE PCLYVKVSME GAPYLRKIDL KTYKSYVELS SALEEMFSCF TIGQFGSHGG CGRDGLNESR LTDLLRGSEY
201: VVTYEDKDSV WMLVGDVPWE MFICSCKKLR IMKSSEAIGL APRVMEKCRS RN
001: MSVSVAAEHD YIGLSEFPTM EATTMSDKTK TRDNNNGLNF KATELRLGLP GSESPERVDS RFLALNKSSC PVSGAKRVFS DAINDSNKWV FSPGSTTATG
101: DVGSGSGPRT SVVKDGKSTT FTKPAVPVKE KKSSATAPAS KAQVVGWPPI RSFRKNSMAS SQSQKPGNNS ETEEAEAKSG PEQPCLYVKV SMEGAPYLRK
201: IDLKTYKSYL ELSSALEKMF SCFTIGQFGS HGGCGRDGLN ESRLTDLLRG SEYVVTYEDK DSDWMLVGDV PWEMFICSCK KLRIMKSSEA IGLAPRVMEK
301: CRSRN
101: DVGSGSGPRT SVVKDGKSTT FTKPAVPVKE KKSSATAPAS KAQVVGWPPI RSFRKNSMAS SQSQKPGNNS ETEEAEAKSG PEQPCLYVKV SMEGAPYLRK
201: IDLKTYKSYL ELSSALEKMF SCFTIGQFGS HGGCGRDGLN ESRLTDLLRG SEYVVTYEDK DSDWMLVGDV PWEMFICSCK KLRIMKSSEA IGLAPRVMEK
301: CRSRN
Arabidopsis Description
IAA27Auxin-responsive protein IAA27 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.